Wall clock time and date at job start Mon Mar 8 2021 04:38:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86297 * 109.47334 * 2 1 4 4 C 1.50703 * 109.46951 * 120.00279 * 2 1 3 5 5 C 1.38260 * 119.94363 * 65.00068 * 4 2 1 6 6 C 1.38143 * 120.05065 * 179.97438 * 5 4 2 7 7 C 1.38736 * 119.94907 * 359.97438 * 6 5 4 8 8 O 1.35893 * 120.05698 * 180.02562 * 7 6 5 9 9 C 1.42901 * 117.00015 * 179.97438 * 8 7 6 10 10 C 1.52998 * 109.47438 * 180.02562 * 9 8 7 11 11 C 1.50701 * 109.47290 * 180.02562 * 10 9 8 12 12 O 1.21277 * 120.00099 * 359.97438 * 11 10 9 13 13 N 1.34778 * 119.99998 * 180.02562 * 11 10 9 14 14 C 1.46500 * 119.99919 * 180.02562 * 13 11 10 15 15 H 1.09002 * 112.85132 * 25.33083 * 14 13 11 16 16 C 1.53781 * 113.61711 * 156.52821 * 14 13 11 17 17 C 1.53785 * 87.08277 * 89.19510 * 16 14 13 18 18 H 1.08999 * 113.61409 * 270.80258 * 17 16 14 19 19 C 1.50700 * 113.61307 * 139.98134 * 17 16 14 20 20 C 1.38200 * 119.97775 * 120.00317 * 19 17 16 21 21 C 1.38348 * 119.99723 * 180.02562 * 20 19 17 22 22 Cl 1.73602 * 120.02072 * 179.97438 * 21 20 19 23 23 C 1.38451 * 119.96425 * 0.02562 * 21 20 19 24 24 Cl 1.73594 * 120.01893 * 179.97438 * 23 21 20 25 25 C 1.38343 * 119.95526 * 359.97438 * 23 21 20 26 26 C 1.38197 * 120.00473 * 359.72967 * 25 23 21 27 27 C 1.53776 * 87.07661 * 25.43397 * 17 16 14 28 28 C 1.38735 * 119.88353 * 0.27500 * 7 6 5 29 29 C 1.38142 * 119.94308 * 359.47485 * 28 7 6 30 30 H 0.96701 * 113.99699 * 300.00264 * 1 2 3 31 31 H 1.09005 * 109.47077 * 240.00100 * 2 1 3 32 32 H 1.48507 * 109.99731 * 300.00231 * 3 2 1 33 33 H 1.48503 * 110.00040 * 61.31832 * 3 2 1 34 34 H 1.07995 * 119.97793 * 359.97438 * 5 4 2 35 35 H 1.08000 * 120.03006 * 179.97438 * 6 5 4 36 36 H 1.09002 * 109.46768 * 60.00352 * 9 8 7 37 37 H 1.09002 * 109.47442 * 300.00578 * 9 8 7 38 38 H 1.08998 * 109.47473 * 60.00352 * 10 9 8 39 39 H 1.09005 * 109.47105 * 299.99822 * 10 9 8 40 40 H 0.96998 * 120.00229 * 359.97438 * 13 11 10 41 41 H 1.08993 * 113.62030 * 203.74957 * 16 14 13 42 42 H 1.09006 * 113.61033 * 334.65409 * 16 14 13 43 43 H 1.07997 * 120.00403 * 359.97436 * 20 19 17 44 44 H 1.08011 * 119.99527 * 179.97438 * 25 23 21 45 45 H 1.08002 * 119.98902 * 180.29448 * 26 25 23 46 46 H 1.09003 * 113.61687 * 220.01420 * 27 17 16 47 47 H 1.09009 * 113.61565 * 89.11769 * 27 17 16 48 48 H 1.08000 * 120.02236 * 179.71897 * 28 7 6 49 49 H 1.07998 * 119.96992 * 180.23274 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6840 -2.0605 1.3971 6 6 2.1438 -2.7141 2.5239 7 6 2.8548 -2.0149 3.4885 8 8 3.3087 -2.6558 4.5975 9 6 4.0336 -1.8730 5.5482 10 6 4.4607 -2.7598 6.7195 11 6 5.2247 -1.9340 7.7223 12 8 5.4098 -0.7527 7.5198 13 7 5.7032 -2.5087 8.8436 14 6 6.4454 -1.7058 9.8187 15 1 6.1861 -0.6477 9.7808 16 6 6.4299 -2.2933 11.2398 17 6 7.6937 -3.0758 10.8453 18 1 7.4839 -4.0490 10.4015 19 6 8.7286 -3.1420 11.9388 20 6 9.1294 -4.3672 12.4369 21 6 10.0791 -4.4285 13.4411 22 17 10.5826 -5.9672 14.0677 23 6 10.6269 -3.2619 13.9469 24 17 11.8180 -3.3370 15.2074 25 6 10.2243 -2.0363 13.4470 26 6 9.2801 -1.9772 12.4397 27 6 7.9604 -1.9696 9.8110 28 6 3.0971 -0.6591 3.3213 29 6 2.6396 -0.0113 2.1902 30 1 -0.3933 0.4418 0.7651 31 1 1.7923 -0.5138 -0.8900 32 1 1.5615 2.4678 -1.2085 33 1 1.5879 2.4585 1.2242 34 1 1.1309 -2.6046 0.6459 35 1 1.9501 -3.7686 2.6540 36 1 3.3981 -1.0669 5.9151 37 1 4.9181 -1.4500 5.0717 38 1 5.0963 -3.5655 6.3523 39 1 3.5765 -3.1829 7.1961 40 1 5.5555 -3.4536 9.0054 41 1 6.6011 -1.5523 12.0206 42 1 5.5675 -2.9292 11.4400 43 1 8.7009 -5.2768 12.0428 44 1 10.6509 -1.1258 13.8414 45 1 8.9695 -1.0205 12.0463 46 1 8.3336 -2.3439 8.8577 47 1 8.5501 -1.1399 10.2011 48 1 3.6464 -0.1117 4.0729 49 1 2.8313 1.0433 2.0578 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:38:39 Heat of formation + Delta-G solvation = -36.081959 kcal Electronic energy + Delta-G solvation = -32848.622625 eV Core-core repulsion = 27988.141605 eV Total energy + Delta-G solvation = -4860.481020 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.088 amu Computer time = 1.64 seconds Orbital eigenvalues (eV) -41.71090 -41.28309 -40.54047 -39.33963 -38.96011 -37.57151 -37.44568 -37.28375 -34.59306 -33.30774 -32.18293 -32.01673 -31.59743 -31.19433 -26.94568 -26.68241 -26.21645 -25.36143 -24.09671 -23.58567 -22.70229 -22.22784 -21.53125 -20.18744 -19.54218 -18.62269 -18.40572 -17.76532 -17.46408 -17.19107 -17.09945 -16.81857 -16.62411 -16.38685 -16.13778 -16.02898 -15.65925 -15.62647 -15.25630 -15.12689 -14.82784 -14.74252 -14.52579 -14.36570 -14.28087 -14.11588 -13.66156 -13.55815 -13.48800 -13.35050 -12.95276 -12.92757 -12.86891 -12.80176 -12.39989 -12.35467 -12.27339 -12.06118 -11.95889 -11.82871 -11.77151 -11.57962 -11.56680 -11.26281 -11.04359 -10.58919 -10.09625 -10.03287 -9.99286 -9.60099 -9.22024 -4.93082 -0.13324 0.05996 0.28498 0.31314 0.79784 1.19580 1.31887 1.53138 1.58200 1.71103 1.94101 2.35174 2.49295 2.65483 3.44406 3.44684 3.53788 3.57213 3.67968 3.69887 3.72951 3.83488 3.88510 3.91207 3.94981 4.00247 4.04607 4.10160 4.19486 4.26843 4.35204 4.38617 4.45380 4.56707 4.64936 4.68240 4.69551 4.71009 4.79102 4.80178 4.85569 4.90469 4.97723 4.98462 5.03363 5.08931 5.17084 5.18772 5.29370 5.38875 5.49950 5.58978 5.62804 5.72691 6.32926 6.48442 6.49320 7.18405 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.074 4.074 3 Si 0.759 3.241 4 C -0.158 4.158 5 C -0.059 4.059 6 C -0.159 4.159 7 C 0.124 3.876 8 O -0.321 6.321 9 C 0.072 3.928 10 C -0.133 4.133 11 C 0.523 3.477 12 O -0.581 6.581 13 N -0.699 5.699 14 C 0.114 3.886 15 H 0.087 0.913 16 C -0.125 4.125 17 C -0.067 4.067 18 H 0.118 0.882 19 C -0.050 4.050 20 C -0.099 4.099 21 C -0.044 4.044 22 Cl -0.061 7.061 23 C -0.053 4.053 24 Cl -0.063 7.063 25 C -0.099 4.099 26 C -0.098 4.098 27 C -0.142 4.142 28 C -0.210 4.210 29 C -0.082 4.082 30 H 0.385 0.615 31 H 0.126 0.874 32 H -0.302 1.302 33 H -0.285 1.285 34 H 0.141 0.859 35 H 0.142 0.858 36 H 0.064 0.936 37 H 0.067 0.933 38 H 0.128 0.872 39 H 0.126 0.874 40 H 0.419 0.581 41 H 0.104 0.896 42 H 0.090 0.910 43 H 0.156 0.844 44 H 0.155 0.845 45 H 0.161 0.839 46 H 0.070 0.930 47 H 0.101 0.899 48 H 0.140 0.860 49 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.143 -1.542 0.792 1.739 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.184 4.184 3 Si 0.665 3.335 4 C -0.159 4.159 5 C -0.077 4.077 6 C -0.177 4.177 7 C 0.079 3.921 8 O -0.235 6.235 9 C -0.004 4.004 10 C -0.173 4.173 11 C 0.310 3.690 12 O -0.461 6.461 13 N -0.351 5.351 14 C 0.009 3.991 15 H 0.106 0.894 16 C -0.162 4.162 17 C -0.085 4.085 18 H 0.136 0.864 19 C -0.051 4.051 20 C -0.118 4.118 21 C -0.072 4.072 22 Cl -0.032 7.032 23 C -0.081 4.081 24 Cl -0.035 7.035 25 C -0.118 4.118 26 C -0.116 4.116 27 C -0.180 4.180 28 C -0.228 4.228 29 C -0.099 4.099 30 H 0.234 0.766 31 H 0.144 0.856 32 H -0.230 1.230 33 H -0.212 1.212 34 H 0.158 0.842 35 H 0.160 0.840 36 H 0.082 0.918 37 H 0.086 0.914 38 H 0.146 0.854 39 H 0.144 0.856 40 H 0.257 0.743 41 H 0.122 0.878 42 H 0.108 0.892 43 H 0.174 0.826 44 H 0.173 0.827 45 H 0.179 0.821 46 H 0.089 0.911 47 H 0.119 0.881 48 H 0.157 0.843 49 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 0.299 -0.554 0.358 0.724 hybrid contribution -0.660 -0.514 1.052 1.344 sum -0.360 -1.068 1.411 1.806 Atomic orbital electron populations 1.86567 1.18635 1.80312 1.50150 1.25096 0.83287 1.11332 0.98660 0.94124 0.90543 0.72593 0.76223 1.20235 1.02633 0.95169 0.97849 1.20990 0.96563 0.93685 0.96428 1.20678 1.01763 1.01395 0.93870 1.19177 0.94514 0.91297 0.87120 1.85956 1.69185 1.38862 1.29505 1.22471 0.95811 0.93644 0.88450 1.21441 1.03049 0.99176 0.93599 1.20604 0.78375 0.87471 0.82510 1.90744 1.59938 1.18097 1.77345 1.45536 1.55452 1.13985 1.20093 1.21845 0.92033 0.96257 0.88999 0.89437 1.23397 0.97537 0.99902 0.95403 1.21675 0.93270 1.00291 0.93276 0.86404 1.19929 0.96699 0.91769 0.96681 1.21170 0.95678 1.00003 0.94901 1.20993 1.00491 0.86098 0.99583 1.98405 1.90386 1.28081 1.86371 1.21039 0.96783 0.94532 0.95726 1.98402 1.55595 1.98771 1.50686 1.21302 0.97695 0.95966 0.96830 1.21390 0.95183 0.99942 0.95094 1.23581 0.96224 0.98892 0.99340 1.21411 1.06544 0.93907 1.00985 1.21022 0.96047 1.00080 0.92761 0.76580 0.85633 1.23040 1.21207 0.84167 0.84004 0.91769 0.91438 0.85415 0.85565 0.74329 0.87778 0.89158 0.82649 0.82698 0.82142 0.91107 0.88064 0.84259 0.84122 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.65 12.83 -148.98 -1.91 -3.56 16 2 C -0.07 0.00 2.80 71.24 0.20 0.20 16 3 Si 0.76 -0.73 29.88 68.60 2.05 1.32 16 4 C -0.16 -0.15 5.35 -19.85 -0.11 -0.26 16 5 C -0.06 -0.08 9.68 22.25 0.22 0.14 16 6 C -0.16 -0.32 9.99 22.37 0.22 -0.10 16 7 C 0.12 0.38 6.69 22.51 0.15 0.53 16 8 O -0.32 -0.58 10.14 -92.35 -0.94 -1.52 16 9 C 0.07 -0.08 4.03 71.98 0.29 0.21 16 10 C -0.13 0.91 6.07 29.85 0.18 1.10 16 11 C 0.52 -1.37 7.83 87.66 0.69 -0.69 16 12 O -0.58 -3.86 15.60 -3.02 -0.05 -3.91 16 13 N -0.70 5.74 5.27 -440.04 -2.32 3.42 16 14 C 0.11 -0.81 4.30 45.52 0.20 -0.61 16 15 H 0.09 -0.21 7.50 -2.39 -0.02 -0.23 16 16 C -0.12 1.32 7.29 31.12 0.23 1.54 16 17 C -0.07 0.68 3.87 -11.01 -0.04 0.64 16 18 H 0.12 -1.50 8.09 -2.39 -0.02 -1.52 16 19 C -0.05 0.31 5.29 -19.87 -0.11 0.21 16 20 C -0.10 0.34 9.49 22.29 0.21 0.55 16 21 C -0.04 -0.05 6.32 22.35 0.14 0.09 16 22 Cl -0.06 -0.20 27.96 -2.72 -0.08 -0.27 16 23 C -0.05 -0.08 6.32 22.35 0.14 0.06 16 24 Cl -0.06 -0.24 27.96 -2.72 -0.08 -0.31 16 25 C -0.10 0.28 9.83 22.29 0.22 0.50 16 26 C -0.10 0.60 8.62 22.27 0.19 0.79 16 27 C -0.14 1.14 7.25 31.12 0.23 1.37 16 28 C -0.21 -0.41 9.04 22.37 0.20 -0.21 16 29 C -0.08 -0.06 8.66 22.25 0.19 0.14 16 30 H 0.39 -0.86 8.70 -74.06 -0.64 -1.51 16 31 H 0.13 -0.24 7.96 -2.38 -0.02 -0.26 16 32 H -0.30 -2.00 7.11 99.48 0.71 -1.29 16 33 H -0.29 -0.85 7.01 99.48 0.70 -0.15 16 34 H 0.14 -0.10 8.06 -2.91 -0.02 -0.12 16 35 H 0.14 -0.07 8.06 -2.91 -0.02 -0.10 16 36 H 0.06 0.03 7.61 -2.39 -0.02 0.01 16 37 H 0.07 0.00 7.63 -2.39 -0.02 -0.02 16 38 H 0.13 -1.35 8.14 -2.39 -0.02 -1.37 16 39 H 0.13 -1.30 8.14 -2.38 -0.02 -1.32 16 40 H 0.42 -5.98 8.71 -92.71 -0.81 -6.78 16 41 H 0.10 -1.11 7.73 -2.39 -0.02 -1.13 16 42 H 0.09 -1.07 8.14 -2.38 -0.02 -1.09 16 43 H 0.16 -1.06 8.05 -2.91 -0.02 -1.08 16 44 H 0.16 -0.89 8.06 -2.90 -0.02 -0.91 16 45 H 0.16 -1.70 6.64 -2.91 -0.02 -1.72 16 46 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 47 H 0.10 -0.89 6.30 -2.38 -0.01 -0.90 16 48 H 0.14 0.02 6.30 -2.91 -0.02 0.01 16 49 H 0.14 -0.36 4.83 -2.91 -0.01 -0.37 16 Total: 0.00 -20.88 435.27 -0.07 -20.95 By element: Atomic # 1 Polarization: -21.91 SS G_CDS: -0.40 Total: -22.31 kcal Atomic # 6 Polarization: 2.55 SS G_CDS: 3.64 Total: 6.19 kcal Atomic # 7 Polarization: 5.74 SS G_CDS: -2.32 Total: 3.42 kcal Atomic # 8 Polarization: -6.09 SS G_CDS: -2.90 Total: -8.99 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: 2.05 Total: 1.32 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -0.15 Total: -0.58 kcal Total: -20.88 -0.07 -20.95 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.134 kcal (2) G-P(sol) polarization free energy of solvation -20.876 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.010 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.072 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.948 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.082 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.64 seconds