Wall clock time and date at job start Mon Mar 8 2021 04:38:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47004 * 2 1 4 4 C 1.50706 * 109.47147 * 240.00515 * 2 1 3 5 5 C 1.38244 * 119.97491 * 119.72203 * 4 2 1 6 6 C 1.38283 * 120.11200 * 179.76679 * 5 4 2 7 7 C 1.38130 * 120.05429 * 0.50914 * 6 5 4 8 8 C 1.38751 * 119.94324 * 359.74770 * 7 6 5 9 9 O 1.35900 * 120.05239 * 179.97438 * 8 7 6 10 10 C 1.42897 * 117.00288 * 0.02562 * 9 8 7 11 11 C 1.52997 * 109.47089 * 180.02562 * 10 9 8 12 12 C 1.53000 * 109.47094 * 180.02562 * 11 10 9 13 13 C 1.50703 * 109.47449 * 180.02562 * 12 11 10 14 14 O 1.21284 * 119.99857 * 359.97438 * 13 12 11 15 15 N 1.34773 * 120.00341 * 179.97438 * 13 12 11 16 16 C 1.46497 * 120.00179 * 179.97438 * 15 13 12 17 17 H 1.09000 * 112.85306 * 336.20264 * 16 15 13 18 18 C 1.53790 * 113.61090 * 107.50422 * 16 15 13 19 19 C 1.53778 * 87.07653 * 89.11717 * 18 16 15 20 20 H 1.08999 * 113.61611 * 270.87610 * 19 18 16 21 21 C 1.50708 * 113.68390 * 139.99254 * 19 18 16 22 22 C 1.38207 * 119.97886 * 142.46715 * 21 19 18 23 23 C 1.38349 * 119.99957 * 179.97438 * 22 21 19 24 24 Cl 1.73602 * 120.01766 * 179.97438 * 23 22 21 25 25 C 1.38444 * 119.96222 * 359.97438 * 23 22 21 26 26 Cl 1.73591 * 120.01977 * 179.97438 * 25 23 22 27 27 C 1.38346 * 119.95993 * 359.97438 * 25 23 22 28 28 C 1.38214 * 120.00001 * 359.73214 * 27 25 23 29 29 C 1.53776 * 113.61806 * 205.00280 * 16 15 13 30 30 C 1.38166 * 119.96660 * 299.99525 * 4 2 1 31 31 H 0.96700 * 114.00205 * 299.99223 * 1 2 3 32 32 H 1.09001 * 109.47626 * 120.00659 * 2 1 3 33 33 H 1.48504 * 110.00088 * 178.68145 * 3 2 1 34 34 H 1.48494 * 110.00213 * 300.00024 * 3 2 1 35 35 H 1.08001 * 119.94451 * 359.97438 * 5 4 2 36 36 H 1.07998 * 119.97599 * 180.23111 * 6 5 4 37 37 H 1.07996 * 120.02813 * 179.72007 * 7 6 5 38 38 H 1.08996 * 109.46899 * 300.00586 * 10 9 8 39 39 H 1.08997 * 109.47080 * 60.00416 * 10 9 8 40 40 H 1.08996 * 109.47624 * 300.00015 * 11 10 9 41 41 H 1.09002 * 109.47345 * 59.99999 * 11 10 9 42 42 H 1.09007 * 109.47154 * 300.00089 * 12 11 10 43 43 H 1.08997 * 109.47166 * 60.00233 * 12 11 10 44 44 H 0.96998 * 119.99891 * 359.97438 * 15 13 12 45 45 H 1.09001 * 113.60992 * 203.67051 * 18 16 15 46 46 H 1.08995 * 113.61348 * 334.56875 * 18 16 15 47 47 H 1.07999 * 120.00202 * 0.02562 * 22 21 19 48 48 H 1.08003 * 119.99951 * 179.97438 * 27 25 23 49 49 H 1.08001 * 119.98069 * 180.29357 * 28 27 25 50 50 H 1.08998 * 113.61689 * 25.42790 * 29 16 15 51 51 H 1.08994 * 113.62029 * 156.34345 * 29 16 15 52 52 H 1.07999 * 120.03143 * 359.96296 * 30 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.7213 -0.0362 -2.1431 6 6 3.1878 -0.6866 -3.2707 7 6 2.8566 -2.0090 -3.4934 8 6 2.0594 -2.6863 -2.5817 9 8 1.7318 -3.9872 -2.7988 10 6 2.2433 -4.5956 -3.9863 11 6 1.7718 -6.0493 -4.0582 12 6 2.3200 -6.7010 -5.3293 13 6 1.8552 -8.1327 -5.4006 14 8 1.1548 -8.5874 -4.5210 15 7 2.2178 -8.9080 -6.4417 16 6 1.7663 -10.3000 -6.5106 17 1 1.5177 -10.7133 -5.5331 18 6 0.6866 -10.5452 -7.5779 19 6 1.8348 -10.8129 -8.5651 20 1 2.1894 -9.9175 -9.0755 21 6 1.5676 -11.9573 -9.5086 22 6 1.9917 -11.8829 -10.8219 23 6 1.7471 -12.9334 -11.6883 24 17 2.2789 -12.8403 -13.3383 25 6 1.0780 -14.0590 -11.2388 26 17 0.7697 -15.3777 -12.3248 27 6 0.6552 -14.1321 -9.9235 28 6 0.9057 -13.0843 -9.0578 29 6 2.6865 -11.2054 -7.3462 30 6 1.5972 -2.0331 -1.4486 31 1 -0.3933 0.4416 0.7651 32 1 1.7924 -0.5139 0.8899 33 1 3.5345 1.7703 0.0321 34 1 1.5614 2.4679 -1.2084 35 1 2.9774 0.9992 -1.9732 36 1 3.8079 -0.1590 -3.9802 37 1 3.2174 -2.5152 -4.3765 38 1 1.8795 -4.0524 -4.8585 39 1 3.3327 -4.5670 -3.9689 40 1 2.1352 -6.5928 -3.1861 41 1 0.6823 -6.0776 -4.0758 42 1 1.9570 -6.1576 -6.2018 43 1 3.4095 -6.6728 -5.3113 44 1 2.7776 -8.5443 -7.1454 45 1 0.0679 -11.4205 -7.3799 46 1 0.1014 -9.6578 -7.8189 47 1 2.5147 -11.0051 -11.1717 48 1 0.1328 -15.0097 -9.5723 49 1 0.5797 -13.1437 -8.0299 50 1 3.7157 -10.8509 -7.4005 51 1 2.6145 -12.2612 -7.0852 52 1 0.9768 -2.5582 -0.7374 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_4549616.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:38:50 Heat of formation + Delta-G solvation = -42.582478 kcal Electronic energy + Delta-G solvation = -34464.867480 eV Core-core repulsion = 29448.566957 eV Total energy + Delta-G solvation = -5016.300522 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 436.104 amu Computer time = 1.75 seconds Orbital eigenvalues (eV) -41.68298 -41.34809 -40.56288 -39.28801 -39.02538 -37.58498 -37.46053 -37.35210 -34.93092 -34.47734 -32.66876 -32.18173 -31.62194 -31.26151 -28.49049 -26.89602 -26.70040 -26.10348 -24.16227 -23.82700 -23.66205 -22.66619 -21.85914 -21.46404 -20.19192 -18.99061 -18.65513 -18.42115 -18.11714 -17.52500 -17.49396 -17.20359 -17.03274 -16.85251 -16.61075 -16.36846 -15.89644 -15.72350 -15.45572 -15.32816 -15.17680 -14.88836 -14.73942 -14.62841 -14.55433 -14.34858 -14.04569 -13.78457 -13.61376 -13.51678 -13.42627 -13.23089 -13.16747 -12.96505 -12.93409 -12.61707 -12.47888 -12.41022 -12.36055 -12.29827 -12.09887 -11.97228 -11.84237 -11.76872 -11.64708 -11.57785 -11.27619 -10.96512 -10.42746 -10.07949 -10.00711 -9.96052 -9.61636 -9.37279 -4.93119 -0.14940 0.04329 0.09046 0.25162 0.78324 1.17986 1.28171 1.60182 1.65332 1.88339 1.97638 2.32836 2.33832 2.53125 3.37986 3.43003 3.51943 3.59755 3.67087 3.68804 3.72645 3.80301 3.84301 3.86473 3.91817 3.98223 4.00311 4.08221 4.11908 4.16780 4.17836 4.31379 4.33361 4.36882 4.40140 4.41955 4.59455 4.61099 4.66425 4.67960 4.76819 4.84427 4.86860 4.89055 4.96727 5.00056 5.01420 5.06618 5.09258 5.15647 5.19495 5.22480 5.31180 5.38632 5.57078 5.59198 5.63532 6.33649 6.53985 6.88182 7.26015 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.088 4.088 3 Si 0.786 3.214 4 C -0.052 4.052 5 C -0.184 4.184 6 C -0.074 4.074 7 C -0.205 4.205 8 C 0.124 3.876 9 O -0.334 6.334 10 C 0.055 3.945 11 C -0.101 4.101 12 C -0.128 4.128 13 C 0.512 3.488 14 O -0.588 6.588 15 N -0.701 5.701 16 C 0.112 3.888 17 H 0.083 0.917 18 C -0.143 4.143 19 C -0.065 4.065 20 H 0.119 0.881 21 C -0.051 4.051 22 C -0.098 4.098 23 C -0.044 4.044 24 Cl -0.061 7.061 25 C -0.053 4.053 26 Cl -0.063 7.063 27 C -0.099 4.099 28 C -0.099 4.099 29 C -0.124 4.124 30 C -0.147 4.147 31 H 0.404 0.596 32 H 0.092 0.908 33 H -0.285 1.285 34 H -0.295 1.295 35 H 0.121 0.879 36 H 0.155 0.845 37 H 0.160 0.840 38 H 0.083 0.917 39 H 0.085 0.915 40 H 0.061 0.939 41 H 0.060 0.940 42 H 0.127 0.873 43 H 0.129 0.871 44 H 0.419 0.581 45 H 0.099 0.901 46 H 0.069 0.931 47 H 0.157 0.843 48 H 0.155 0.845 49 H 0.159 0.841 50 H 0.091 0.909 51 H 0.102 0.898 52 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.172 3.837 0.871 5.735 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.197 4.197 3 Si 0.691 3.309 4 C -0.052 4.052 5 C -0.202 4.202 6 C -0.092 4.092 7 C -0.223 4.223 8 C 0.078 3.922 9 O -0.248 6.248 10 C -0.019 4.019 11 C -0.140 4.140 12 C -0.167 4.167 13 C 0.300 3.700 14 O -0.468 6.468 15 N -0.353 5.353 16 C 0.006 3.994 17 H 0.101 0.899 18 C -0.181 4.181 19 C -0.083 4.083 20 H 0.137 0.863 21 C -0.051 4.051 22 C -0.117 4.117 23 C -0.071 4.071 24 Cl -0.032 7.032 25 C -0.080 4.080 26 Cl -0.034 7.034 27 C -0.118 4.118 28 C -0.117 4.117 29 C -0.162 4.162 30 C -0.166 4.166 31 H 0.255 0.745 32 H 0.110 0.890 33 H -0.212 1.212 34 H -0.223 1.223 35 H 0.138 0.862 36 H 0.173 0.827 37 H 0.178 0.822 38 H 0.101 0.899 39 H 0.103 0.897 40 H 0.080 0.920 41 H 0.079 0.921 42 H 0.145 0.855 43 H 0.147 0.853 44 H 0.256 0.744 45 H 0.117 0.883 46 H 0.088 0.912 47 H 0.175 0.825 48 H 0.173 0.827 49 H 0.177 0.823 50 H 0.109 0.891 51 H 0.121 0.879 52 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 4.147 3.526 0.390 5.457 hybrid contribution 0.113 -0.853 -1.076 1.378 sum 4.260 2.673 -0.687 5.076 Atomic orbital electron populations 1.86447 1.17200 1.82526 1.51339 1.25005 0.85979 1.11752 0.96962 0.94310 0.77224 0.74663 0.84708 1.19507 0.96562 0.93258 0.95907 1.20993 1.02835 0.99635 0.96754 1.21222 0.97517 0.94074 0.96341 1.21585 1.02881 0.96327 1.01546 1.19180 0.94623 0.83750 0.94635 1.86060 1.71529 1.22379 1.44814 1.23050 0.99794 0.93373 0.85703 1.21152 1.01628 0.92679 0.98496 1.21539 1.04695 0.90695 0.99819 1.21140 0.78994 0.89132 0.80750 1.90743 1.39644 1.75949 1.40417 1.45585 1.53285 1.11388 1.25071 1.21829 0.96250 0.82162 0.99122 0.89889 1.23577 0.96530 1.02968 0.95053 1.21660 0.97698 0.96057 0.92903 0.86267 1.19925 0.96123 0.95920 0.93139 1.21170 1.00268 0.97777 0.92458 1.20985 1.02364 0.96133 0.87638 1.98404 1.88776 1.98243 1.17736 1.21031 1.03597 0.90295 0.93114 1.98402 1.94444 1.46535 1.64019 1.21299 0.99415 1.00939 0.90151 1.21381 0.97414 0.91867 1.01023 1.23390 0.99130 1.00655 0.93023 1.20371 1.03632 0.94558 0.98034 0.74490 0.88996 1.21190 1.22282 0.86197 0.82716 0.82230 0.89933 0.89668 0.91976 0.92146 0.85458 0.85321 0.74356 0.88289 0.91178 0.82543 0.82726 0.82324 0.89084 0.87944 0.85460 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.26 12.74 -148.98 -1.90 -3.16 16 2 C -0.09 -0.15 2.81 71.24 0.20 0.05 16 3 Si 0.79 -1.04 29.79 68.60 2.04 1.00 16 4 C -0.05 -0.38 5.42 -19.88 -0.11 -0.49 16 5 C -0.18 -1.13 8.67 22.28 0.19 -0.93 16 6 C -0.07 -0.20 10.04 22.25 0.22 0.03 16 7 C -0.20 -0.46 9.04 22.37 0.20 -0.25 16 8 C 0.12 0.86 6.69 22.51 0.15 1.01 16 9 O -0.33 -2.21 10.14 -92.42 -0.94 -3.15 16 10 C 0.06 -0.13 4.74 71.98 0.34 0.21 16 11 C -0.10 0.08 4.87 30.59 0.15 0.23 16 12 C -0.13 1.02 5.70 29.85 0.17 1.19 16 13 C 0.51 -0.47 7.83 87.66 0.69 0.22 16 14 O -0.59 -6.04 15.58 -3.04 -0.05 -6.08 16 15 N -0.70 4.91 5.26 -440.03 -2.32 2.60 16 16 C 0.11 -0.60 4.32 45.52 0.20 -0.40 16 17 H 0.08 0.02 7.46 -2.39 -0.02 0.00 16 18 C -0.14 0.93 7.26 31.12 0.23 1.16 16 19 C -0.07 0.60 3.85 -11.01 -0.04 0.56 16 20 H 0.12 -1.46 8.09 -2.39 -0.02 -1.48 16 21 C -0.05 0.28 5.29 -19.86 -0.11 0.17 16 22 C -0.10 0.29 9.49 22.29 0.21 0.51 16 23 C -0.04 -0.07 6.32 22.35 0.14 0.07 16 24 Cl -0.06 -0.20 27.96 -2.72 -0.08 -0.28 16 25 C -0.05 -0.10 6.32 22.34 0.14 0.04 16 26 Cl -0.06 -0.26 27.96 -2.72 -0.08 -0.33 16 27 C -0.10 0.21 9.83 22.29 0.22 0.42 16 28 C -0.10 0.51 8.59 22.27 0.19 0.70 16 29 C -0.12 1.17 7.29 31.12 0.23 1.39 16 30 C -0.15 -1.32 9.55 22.37 0.21 -1.11 16 31 H 0.40 -3.57 8.74 -74.06 -0.65 -4.21 16 32 H 0.09 -0.18 7.96 -2.39 -0.02 -0.20 16 33 H -0.28 -0.97 7.11 99.48 0.71 -0.26 16 34 H -0.30 -1.75 7.11 99.48 0.71 -1.04 16 35 H 0.12 0.58 4.87 -2.91 -0.01 0.56 16 36 H 0.16 -0.50 8.06 -2.91 -0.02 -0.52 16 37 H 0.16 -0.72 6.30 -2.91 -0.02 -0.74 16 38 H 0.08 -0.49 7.66 -2.39 -0.02 -0.51 16 39 H 0.09 -0.55 7.66 -2.39 -0.02 -0.57 16 40 H 0.06 0.22 8.10 -2.39 -0.02 0.20 16 41 H 0.06 0.24 8.10 -2.39 -0.02 0.22 16 42 H 0.13 -1.69 8.14 -2.38 -0.02 -1.71 16 43 H 0.13 -1.74 8.14 -2.39 -0.02 -1.76 16 44 H 0.42 -5.79 8.70 -92.71 -0.81 -6.60 16 45 H 0.10 -0.69 6.34 -2.39 -0.02 -0.71 16 46 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 47 H 0.16 -1.04 8.05 -2.91 -0.02 -1.06 16 48 H 0.16 -0.77 8.06 -2.91 -0.02 -0.79 16 49 H 0.16 -1.48 6.69 -2.91 -0.02 -1.50 16 50 H 0.09 -1.00 8.14 -2.39 -0.02 -1.02 16 51 H 0.10 -0.96 7.71 -2.39 -0.02 -0.98 16 52 H 0.13 1.19 8.06 -2.91 -0.02 1.16 16 Total: 0.00 -28.55 456.77 0.09 -28.46 By element: Atomic # 1 Polarization: -23.41 SS G_CDS: -0.43 Total: -23.84 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: 3.83 Total: 4.78 kcal Atomic # 7 Polarization: 4.91 SS G_CDS: -2.32 Total: 2.60 kcal Atomic # 8 Polarization: -9.51 SS G_CDS: -2.88 Total: -12.39 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: 2.04 Total: 1.00 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -0.15 Total: -0.61 kcal Total: -28.55 0.09 -28.46 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_4549616.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.125 kcal (2) G-P(sol) polarization free energy of solvation -28.551 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.676 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.093 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.457 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.582 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.75 seconds