Wall clock time and date at job start Mon Mar 8 2021 04:40:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35988 * 117.00050 * 2 1 4 4 C 1.39159 * 120.07398 * 180.02562 * 3 2 1 5 5 O 1.35990 * 120.07156 * 359.95861 * 4 3 2 6 6 C 1.42895 * 117.00021 * 179.97438 * 5 4 3 7 7 C 1.50707 * 109.47246 * 180.02562 * 6 5 4 8 8 O 1.21285 * 119.99735 * 359.97438 * 7 6 5 9 9 N 1.34775 * 119.99924 * 180.02562 * 7 6 5 10 10 C 1.46506 * 119.99679 * 179.97438 * 9 7 6 11 11 H 1.09002 * 112.84888 * 25.33679 * 10 9 7 12 12 C 1.53783 * 113.60815 * 156.52770 * 10 9 7 13 13 C 1.53778 * 87.08121 * 89.12189 * 12 10 9 14 14 H 1.09000 * 113.61531 * 270.80083 * 13 12 10 15 15 C 1.50697 * 113.61956 * 139.97546 * 13 12 10 16 16 C 1.38208 * 119.98077 * 299.72999 * 15 13 12 17 17 C 1.38341 * 119.99568 * 179.72123 * 16 15 13 18 18 Cl 1.73604 * 120.01617 * 180.26870 * 17 16 15 19 19 C 1.38442 * 119.96529 * 0.54945 * 17 16 15 20 20 Cl 1.73599 * 120.02315 * 179.74829 * 19 17 16 21 21 C 1.38346 * 119.95998 * 359.72231 * 19 17 16 22 22 C 1.38200 * 120.00337 * 0.02562 * 21 19 17 23 23 C 1.53780 * 113.61703 * 254.13759 * 10 9 7 24 24 C 1.38562 * 119.85457 * 179.97438 * 4 3 2 25 25 C 1.38246 * 119.99978 * 359.75019 * 24 4 3 26 26 C 1.38255 * 120.14603 * 0.50920 * 25 24 4 27 27 C 1.50699 * 119.92682 * 179.76682 * 26 25 24 28 28 O 1.42901 * 109.46830 * 119.72111 * 27 26 25 29 29 Si 1.86298 * 109.46950 * 359.72548 * 27 26 25 30 30 C 1.38241 * 120.14388 * 359.48603 * 26 25 24 31 31 H 1.08997 * 109.47260 * 179.97438 * 1 2 3 32 32 H 1.08996 * 109.46870 * 300.00097 * 1 2 3 33 33 H 1.09001 * 109.47130 * 60.00141 * 1 2 3 34 34 H 1.09002 * 109.47219 * 299.99627 * 6 5 4 35 35 H 1.08995 * 109.47486 * 60.00094 * 6 5 4 36 36 H 0.96998 * 120.00352 * 359.97438 * 9 7 6 37 37 H 1.09008 * 113.60927 * 203.66482 * 12 10 9 38 38 H 1.09000 * 113.61746 * 334.57034 * 12 10 9 39 39 H 1.07999 * 119.99859 * 359.97438 * 16 15 13 40 40 H 1.08003 * 120.00164 * 180.02562 * 21 19 17 41 41 H 1.08003 * 119.98478 * 179.97438 * 22 21 19 42 42 H 1.09000 * 113.61228 * 25.42925 * 23 10 9 43 43 H 1.08996 * 113.61398 * 156.34128 * 23 10 9 44 44 H 1.08002 * 120.00132 * 180.02562 * 24 4 3 45 45 H 1.08005 * 119.92689 * 180.25343 * 25 24 4 46 46 H 1.08991 * 109.47351 * 239.72258 * 27 26 25 47 47 H 0.96708 * 114.00246 * 299.99864 * 28 27 26 48 48 H 1.48506 * 109.99834 * 180.02562 * 29 27 26 49 49 H 1.48502 * 110.00011 * 301.31529 * 29 27 26 50 50 H 1.08001 * 119.99967 * 180.23686 * 30 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1795 0.1476 -0.0002 6 6 5.6003 0.3006 -0.0014 7 6 6.2519 -1.0583 -0.0015 8 8 5.5669 -2.0593 -0.0001 9 7 7.5957 -1.1613 -0.0019 10 6 8.2291 -2.4824 -0.0015 11 1 7.5932 -3.2568 -0.4306 12 6 9.6606 -2.4793 -0.5633 13 6 10.1383 -2.1910 0.8697 14 1 10.1903 -1.1285 1.1072 15 6 11.3906 -2.9378 1.2504 16 6 11.4014 -4.3197 1.2380 17 6 12.5527 -5.0055 1.5818 18 17 12.5689 -6.7413 1.5597 19 6 13.6900 -4.3069 1.9491 20 17 15.1335 -5.1660 2.3872 21 6 13.6758 -2.9236 1.9664 22 6 12.5265 -2.2399 1.6176 23 6 8.8432 -2.8706 1.3539 24 6 4.0603 2.5233 -0.0011 25 6 3.3030 3.6798 -0.0063 26 6 1.9224 3.6057 -0.0004 27 6 1.1017 4.8696 -0.0008 28 8 0.2773 4.9017 -1.1675 29 14 2.2366 6.3470 -0.0015 30 6 1.2933 2.3748 0.0001 31 1 -0.3633 -1.0276 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 -0.3633 0.5138 -0.8900 34 1 5.9059 0.8496 -0.8920 35 1 5.9072 0.8510 0.8879 36 1 8.1435 -0.3608 -0.0026 37 1 9.9823 -3.4487 -0.9440 38 1 9.8543 -1.6641 -1.2605 39 1 10.5124 -4.8642 0.9559 40 1 14.5628 -2.3779 2.2524 41 1 12.5155 -1.1601 1.6316 42 1 8.3776 -2.3710 2.2034 43 1 8.9419 -3.9468 1.4963 44 1 5.1387 2.5839 -0.0019 45 1 3.7909 4.6434 -0.0108 46 1 0.4730 4.8949 0.8892 47 1 0.7711 4.8819 -1.9988 48 1 1.4394 7.5999 -0.0013 49 1 3.1214 6.3084 1.1906 50 1 0.2147 2.3196 0.0009 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:40:12 Heat of formation + Delta-G solvation = -61.412282 kcal Electronic energy + Delta-G solvation = -35970.711183 eV Core-core repulsion = 30790.449566 eV Total energy + Delta-G solvation = -5180.261617 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 438.088 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -41.87878 -41.55049 -40.59983 -39.55749 -38.97629 -38.70362 -37.57084 -37.44189 -36.90165 -34.65161 -32.13816 -31.93999 -31.71291 -31.40444 -29.47092 -28.45329 -26.70624 -26.35431 -25.97788 -24.12636 -23.62244 -22.80604 -22.51175 -21.80648 -20.26284 -19.78058 -18.68728 -18.50173 -18.27764 -17.87596 -17.50418 -17.27770 -17.05178 -16.79409 -16.67057 -16.59064 -16.08054 -15.90515 -15.77856 -15.65950 -15.45464 -15.34252 -15.15378 -14.96812 -14.74261 -14.47197 -14.29211 -13.79714 -13.75118 -13.60918 -13.54787 -13.48649 -13.37592 -12.94994 -12.89996 -12.63537 -12.53062 -12.41776 -12.27866 -12.15697 -12.05810 -12.03846 -11.99095 -11.82057 -11.72110 -11.57520 -11.25344 -10.99524 -10.42774 -10.15385 -9.97417 -9.77463 -9.59595 -8.89816 -4.95688 -0.11324 0.06270 0.18199 0.29184 0.80302 1.20508 1.35010 1.46287 1.48774 1.68036 2.01466 2.31644 2.36644 2.57722 2.58314 3.42272 3.49976 3.52955 3.58886 3.63849 3.68640 3.71067 3.88441 3.90901 3.93630 4.06810 4.07209 4.12670 4.15186 4.15779 4.26892 4.28208 4.29798 4.30269 4.37503 4.50672 4.60895 4.65273 4.66557 4.73500 4.78472 4.84289 4.88798 4.99204 5.01816 5.03186 5.05813 5.13691 5.16350 5.38567 5.39279 5.56937 5.60937 5.63704 5.98333 6.43536 6.56270 6.78645 7.17658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.335 6.335 3 C 0.076 3.924 4 C 0.085 3.915 5 O -0.315 6.315 6 C 0.034 3.966 7 C 0.514 3.486 8 O -0.573 6.573 9 N -0.689 5.689 10 C 0.115 3.885 11 H 0.078 0.922 12 C -0.123 4.123 13 C -0.061 4.061 14 H 0.133 0.867 15 C -0.052 4.052 16 C -0.103 4.103 17 C -0.045 4.045 18 Cl -0.064 7.064 19 C -0.053 4.053 20 Cl -0.064 7.064 21 C -0.100 4.100 22 C -0.091 4.091 23 C -0.148 4.148 24 C -0.158 4.158 25 C -0.110 4.110 26 C -0.119 4.119 27 C -0.077 4.077 28 O -0.558 6.558 29 Si 0.788 3.212 30 C -0.153 4.153 31 H 0.111 0.889 32 H 0.062 0.938 33 H 0.065 0.935 34 H 0.132 0.868 35 H 0.128 0.872 36 H 0.424 0.576 37 H 0.096 0.904 38 H 0.100 0.900 39 H 0.148 0.852 40 H 0.158 0.842 41 H 0.171 0.829 42 H 0.072 0.928 43 H 0.090 0.910 44 H 0.179 0.821 45 H 0.160 0.840 46 H 0.103 0.897 47 H 0.395 0.605 48 H -0.304 1.304 49 H -0.277 1.277 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.803 9.532 -2.735 11.019 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.249 6.249 3 C 0.030 3.970 4 C 0.040 3.960 5 O -0.229 6.229 6 C -0.044 4.044 7 C 0.300 3.700 8 O -0.451 6.451 9 N -0.344 5.344 10 C 0.009 3.991 11 H 0.097 0.903 12 C -0.160 4.160 13 C -0.079 4.079 14 H 0.151 0.849 15 C -0.053 4.053 16 C -0.122 4.122 17 C -0.073 4.073 18 Cl -0.035 7.035 19 C -0.081 4.081 20 Cl -0.035 7.035 21 C -0.119 4.119 22 C -0.109 4.109 23 C -0.186 4.186 24 C -0.176 4.176 25 C -0.128 4.128 26 C -0.120 4.120 27 C -0.187 4.187 28 O -0.366 6.366 29 Si 0.694 3.306 30 C -0.172 4.172 31 H 0.129 0.871 32 H 0.080 0.920 33 H 0.083 0.917 34 H 0.149 0.851 35 H 0.146 0.854 36 H 0.262 0.738 37 H 0.115 0.885 38 H 0.118 0.882 39 H 0.165 0.835 40 H 0.175 0.825 41 H 0.189 0.811 42 H 0.091 0.909 43 H 0.108 0.892 44 H 0.196 0.804 45 H 0.177 0.823 46 H 0.120 0.880 47 H 0.245 0.755 48 H -0.233 1.233 49 H -0.204 1.204 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 4.242 8.897 -1.844 10.028 hybrid contribution -0.431 -0.972 0.640 1.241 sum 3.812 7.925 -1.204 8.876 Atomic orbital electron populations 1.23271 0.76874 1.05166 1.02043 1.86186 1.22938 1.26711 1.89109 1.18685 0.90008 0.85538 1.02733 1.18580 0.88118 0.86587 1.02736 1.86222 1.18336 1.29045 1.89298 1.22798 0.79273 0.95077 1.07209 1.20596 0.83041 0.90838 0.75478 1.90786 1.64167 1.40285 1.49905 1.45286 1.04949 1.09560 1.74581 1.21830 0.94305 0.85304 0.97673 0.90330 1.23374 0.92021 1.04571 0.96082 1.21750 0.89067 1.00627 0.96428 0.84899 1.19941 0.96245 0.92047 0.97021 1.21073 0.96389 0.94752 0.99993 1.20956 0.95356 0.85312 1.05642 1.98405 1.98723 1.09428 1.96991 1.21055 0.88004 0.93664 1.05349 1.98402 1.36477 1.77367 1.91279 1.21363 1.00927 0.90418 0.99163 1.21515 0.90636 1.02183 0.96531 1.23636 0.95680 1.01776 0.97532 1.21398 1.02355 0.89202 1.04659 1.21021 0.92232 0.99082 1.00434 1.20200 0.94555 0.94748 1.02482 1.25281 0.99817 1.02588 0.90971 1.86464 1.36805 1.96949 1.16391 0.93638 0.78283 0.72325 0.86384 1.20994 1.00456 0.90636 1.05127 0.87114 0.91989 0.91666 0.85079 0.85446 0.73751 0.88545 0.88158 0.83465 0.82461 0.81139 0.90898 0.89155 0.80406 0.82327 0.87961 0.75459 1.23267 1.20403 0.84333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.05 9.81 113.37 1.11 1.16 16 2 O -0.34 -3.60 10.28 -79.54 -0.82 -4.42 16 3 C 0.08 0.56 6.70 22.57 0.15 0.71 16 4 C 0.09 0.37 6.70 22.57 0.15 0.52 16 5 O -0.32 -2.23 9.45 -67.02 -0.63 -2.87 16 6 C 0.03 -0.16 5.22 71.24 0.37 0.21 16 7 C 0.51 0.64 7.91 87.66 0.69 1.33 16 8 O -0.57 -8.31 16.12 15.99 0.26 -8.05 16 9 N -0.69 5.09 5.26 -440.01 -2.32 2.77 16 10 C 0.11 -0.56 4.29 45.52 0.20 -0.37 16 11 H 0.08 0.13 7.50 -2.39 -0.02 0.11 16 12 C -0.12 1.21 7.29 31.12 0.23 1.44 16 13 C -0.06 0.64 3.87 -10.92 -0.04 0.60 16 14 H 0.13 -2.08 8.09 -2.39 -0.02 -2.10 16 15 C -0.05 0.33 5.29 -19.86 -0.11 0.23 16 16 C -0.10 0.22 8.41 22.29 0.19 0.41 16 17 C -0.05 -0.09 6.32 22.34 0.14 0.05 16 18 Cl -0.06 -0.30 27.96 -2.72 -0.08 -0.37 16 19 C -0.05 -0.08 6.32 22.34 0.14 0.06 16 20 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.32 16 21 C -0.10 0.36 9.83 22.29 0.22 0.58 16 22 C -0.09 0.69 9.71 22.27 0.22 0.90 16 23 C -0.15 0.86 7.27 31.22 0.23 1.08 16 24 C -0.16 0.66 9.04 22.35 0.20 0.86 16 25 C -0.11 0.50 8.66 22.28 0.19 0.69 16 26 C -0.12 0.08 5.39 -19.86 -0.11 -0.03 16 27 C -0.08 0.14 2.82 71.24 0.20 0.34 16 28 O -0.56 0.38 12.77 -148.98 -1.90 -1.53 16 29 Si 0.79 -3.89 29.78 68.60 2.04 -1.85 16 30 C -0.15 -0.52 8.60 22.35 0.19 -0.32 16 31 H 0.11 -0.03 8.14 -2.39 -0.02 -0.05 16 32 H 0.06 0.02 7.66 -2.39 -0.02 0.00 16 33 H 0.06 0.00 7.66 -2.39 -0.02 -0.01 16 34 H 0.13 -1.62 7.66 -2.39 -0.02 -1.63 16 35 H 0.13 -1.50 7.66 -2.39 -0.02 -1.52 16 36 H 0.42 -6.82 8.70 -92.71 -0.81 -7.63 16 37 H 0.10 -0.80 7.73 -2.38 -0.02 -0.82 16 38 H 0.10 -1.30 8.14 -2.39 -0.02 -1.32 16 39 H 0.15 -0.54 6.64 -2.91 -0.02 -0.56 16 40 H 0.16 -1.09 8.06 -2.91 -0.02 -1.12 16 41 H 0.17 -2.40 8.05 -2.91 -0.02 -2.43 16 42 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 43 H 0.09 -0.39 6.30 -2.39 -0.02 -0.41 16 44 H 0.18 -2.31 6.30 -2.91 -0.02 -2.33 16 45 H 0.16 -1.65 4.87 -2.91 -0.01 -1.66 16 46 H 0.10 -0.01 7.96 -2.39 -0.02 -0.03 16 47 H 0.40 -3.47 8.70 -74.05 -0.64 -4.12 16 48 H -0.30 -1.03 7.11 99.48 0.71 -0.32 16 49 H -0.28 0.41 7.11 99.48 0.71 1.12 16 50 H 0.14 0.33 6.30 -2.91 -0.02 0.31 16 Total: 0.00 -33.70 443.54 0.67 -33.03 By element: Atomic # 1 Polarization: -26.47 SS G_CDS: -0.38 Total: -26.85 kcal Atomic # 6 Polarization: 5.88 SS G_CDS: 4.57 Total: 10.45 kcal Atomic # 7 Polarization: 5.09 SS G_CDS: -2.32 Total: 2.77 kcal Atomic # 8 Polarization: -13.77 SS G_CDS: -3.10 Total: -16.87 kcal Atomic # 14 Polarization: -3.89 SS G_CDS: 2.04 Total: -1.85 kcal Atomic # 17 Polarization: -0.54 SS G_CDS: -0.15 Total: -0.70 kcal Total: -33.70 0.67 -33.03 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.381 kcal (2) G-P(sol) polarization free energy of solvation -33.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.084 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.672 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.032 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.412 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds