Wall clock time and date at job start Mon Mar 8 2021 04:40:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38244 * 119.94230 * 299.99955 * 4 2 1 6 6 C 1.38236 * 120.04782 * 179.97438 * 5 4 2 7 7 Br 1.89097 * 120.03920 * 180.02562 * 6 5 4 8 8 C 1.38797 * 119.92791 * 0.02562 * 6 5 4 9 9 O 1.35917 * 120.05906 * 179.97438 * 8 6 5 10 10 C 1.42903 * 116.99858 * 180.02562 * 9 8 6 11 11 C 1.50696 * 109.46929 * 179.97438 * 10 9 8 12 12 O 1.21280 * 120.00302 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99761 * 179.97438 * 11 10 9 14 14 C 1.46504 * 119.99670 * 180.02562 * 13 11 10 15 15 H 1.08994 * 112.84961 * 25.34021 * 14 13 11 16 16 C 1.53781 * 113.61213 * 156.53789 * 14 13 11 17 17 C 1.53775 * 87.08461 * 89.11328 * 16 14 13 18 18 H 1.09001 * 113.61301 * 270.79977 * 17 16 14 19 19 C 1.50704 * 113.61568 * 139.98024 * 17 16 14 20 20 C 1.38224 * 119.97968 * 299.72926 * 19 17 16 21 21 C 1.38249 * 120.03553 * 179.72325 * 20 19 17 22 22 C 1.38299 * 119.99901 * 0.54985 * 21 20 19 23 23 Cl 1.73598 * 120.01753 * 179.70257 * 22 21 20 24 24 C 1.38484 * 119.96174 * 359.72263 * 22 21 20 25 25 Cl 1.73601 * 120.01636 * 180.02562 * 24 22 21 26 26 C 1.38244 * 119.98134 * 119.99818 * 19 17 16 27 27 C 1.53781 * 113.61338 * 254.13928 * 14 13 11 28 28 C 1.38723 * 119.88150 * 359.97438 * 8 6 5 29 29 C 1.38143 * 119.95022 * 359.73072 * 28 8 6 30 30 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 31 31 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 32 32 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 33 33 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 34 34 H 1.08003 * 119.97461 * 359.97438 * 5 4 2 35 35 H 1.09005 * 109.47066 * 299.99919 * 10 9 8 36 36 H 1.08993 * 109.47400 * 59.99838 * 10 9 8 37 37 H 0.96995 * 120.00380 * 0.02562 * 13 11 10 38 38 H 1.08998 * 113.61243 * 203.66443 * 16 14 13 39 39 H 1.09001 * 113.61208 * 334.56174 * 16 14 13 40 40 H 1.08007 * 119.97970 * 359.97438 * 20 19 17 41 41 H 1.07998 * 119.99548 * 180.29579 * 21 20 19 42 42 H 1.07999 * 119.99911 * 359.97438 * 26 19 17 43 43 H 1.09004 * 113.61560 * 25.43426 * 27 14 13 44 44 H 1.09002 * 113.61236 * 156.33360 * 27 14 13 45 45 H 1.07997 * 120.02524 * 180.02562 * 28 8 6 46 46 H 1.08008 * 119.96232 * 180.27252 * 29 28 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5965 -2.0338 -1.4482 6 6 2.0556 -2.6874 -2.5765 7 35 1.5970 -4.4975 -2.8744 8 6 2.8536 -2.0135 -3.4906 9 8 3.3069 -2.6536 -4.6006 10 6 4.1237 -1.8979 -5.4971 11 6 4.5294 -2.7663 -6.6600 12 8 4.1554 -3.9187 -6.7159 13 7 5.3069 -2.2620 -7.6386 14 6 5.7008 -3.1061 -8.7694 15 1 4.9998 -3.9199 -8.9545 16 6 6.0688 -2.3106 -10.0330 17 6 7.5081 -2.2701 -9.4932 18 1 7.7095 -1.4128 -8.8508 19 6 8.5576 -2.4635 -10.5572 20 6 8.5829 -3.6299 -11.2985 21 6 9.5417 -3.8061 -12.2788 22 6 10.4832 -2.8200 -12.5104 23 17 11.6921 -3.0441 -13.7360 24 6 10.4613 -1.6538 -11.7639 25 17 11.6421 -0.4147 -12.0539 26 6 9.4980 -1.4767 -10.7875 27 6 7.1698 -3.5580 -8.7185 28 6 3.1877 -0.6854 -3.2692 29 6 2.7211 -0.0353 -2.1431 30 1 -0.3934 0.4418 -0.7650 31 1 1.7923 -0.5138 0.8899 32 1 1.5616 2.4678 1.2086 33 1 3.5346 1.7703 -0.0322 34 1 0.9759 -2.5576 -0.7362 35 1 3.5622 -1.0384 -5.8635 36 1 5.0152 -1.5530 -4.9734 37 1 5.6058 -1.3403 -7.5942 38 1 5.9642 -2.8826 -10.9549 39 1 5.5944 -1.3307 -10.0856 40 1 7.8507 -4.4023 -11.1145 41 1 9.5579 -4.7157 -12.8608 42 1 9.4801 -0.5673 -10.2053 43 1 7.5839 -3.5843 -7.7105 44 1 7.3657 -4.4705 -9.2817 45 1 3.8081 -0.1586 -3.9791 46 1 2.9775 1.0000 -1.9728 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:40:17 Heat of formation + Delta-G solvation = -21.473924 kcal Electronic energy + Delta-G solvation = -33485.467425 eV Core-core repulsion = 28441.339473 eV Total energy + Delta-G solvation = -5044.127952 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 485.983 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -41.81810 -41.39903 -40.47434 -39.39399 -38.75331 -37.56473 -37.43235 -37.17925 -34.62958 -33.59422 -32.20026 -31.92189 -31.58026 -30.48409 -29.50146 -26.68091 -26.49641 -26.00023 -24.18707 -23.95793 -22.82300 -22.39569 -21.82414 -20.24026 -19.55750 -18.66702 -18.39648 -18.07430 -17.48713 -17.26616 -17.04662 -16.85526 -16.58163 -16.34545 -16.03036 -15.81100 -15.68331 -15.49756 -15.28182 -15.16766 -14.89436 -14.73069 -14.51192 -14.41592 -13.98604 -13.78190 -13.67398 -13.61933 -13.54761 -13.34844 -12.94524 -12.91719 -12.41678 -12.37777 -12.33412 -12.15846 -12.10049 -11.95496 -11.90087 -11.83603 -11.79957 -11.56818 -11.25754 -11.21893 -10.98758 -10.42324 -10.13018 -9.98538 -9.96172 -9.59537 -9.30070 -4.96993 -0.12660 -0.04203 0.06721 0.13270 0.65448 0.80464 1.20286 1.34771 1.42673 1.47420 1.66615 2.02735 2.35750 2.41325 2.52085 3.44257 3.48186 3.50632 3.54969 3.65827 3.69032 3.71362 3.77798 3.84709 3.93032 4.00972 4.05549 4.10798 4.12663 4.13602 4.20256 4.35524 4.39466 4.51820 4.64343 4.66317 4.69416 4.79643 4.84851 4.85978 4.90331 4.97993 5.01442 5.03906 5.09254 5.16384 5.24956 5.37899 5.49460 5.59631 5.61802 6.08463 6.48445 6.79918 7.17751 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.076 4.076 3 Si 0.788 3.212 4 C -0.153 4.153 5 C -0.036 4.036 6 C -0.145 4.145 7 Br -0.056 7.056 8 C 0.149 3.851 9 O -0.306 6.306 10 C 0.031 3.969 11 C 0.514 3.486 12 O -0.568 6.568 13 N -0.692 5.692 14 C 0.116 3.884 15 H 0.083 0.917 16 C -0.122 4.122 17 C -0.065 4.065 18 H 0.123 0.877 19 C -0.050 4.050 20 C -0.099 4.099 21 C -0.100 4.100 22 C -0.053 4.053 23 Cl -0.064 7.064 24 C -0.044 4.044 25 Cl -0.061 7.061 26 C -0.097 4.097 27 C -0.144 4.144 28 C -0.188 4.188 29 C -0.055 4.055 30 H 0.396 0.604 31 H 0.104 0.896 32 H -0.305 1.305 33 H -0.274 1.274 34 H 0.134 0.866 35 H 0.135 0.865 36 H 0.131 0.869 37 H 0.422 0.578 38 H 0.103 0.897 39 H 0.095 0.905 40 H 0.159 0.841 41 H 0.154 0.846 42 H 0.159 0.841 43 H 0.070 0.930 44 H 0.098 0.902 45 H 0.182 0.818 46 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.051 8.794 -1.905 8.998 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.185 4.185 3 Si 0.694 3.306 4 C -0.154 4.154 5 C -0.056 4.056 6 C -0.225 4.225 7 Br 0.030 6.970 8 C 0.101 3.899 9 O -0.218 6.218 10 C -0.046 4.046 11 C 0.301 3.699 12 O -0.446 6.446 13 N -0.346 5.346 14 C 0.010 3.990 15 H 0.101 0.899 16 C -0.160 4.160 17 C -0.083 4.083 18 H 0.141 0.859 19 C -0.051 4.051 20 C -0.117 4.117 21 C -0.119 4.119 22 C -0.081 4.081 23 Cl -0.035 7.035 24 C -0.072 4.072 25 Cl -0.032 7.032 26 C -0.116 4.116 27 C -0.183 4.183 28 C -0.207 4.207 29 C -0.073 4.073 30 H 0.246 0.754 31 H 0.121 0.879 32 H -0.234 1.234 33 H -0.201 1.201 34 H 0.152 0.848 35 H 0.153 0.847 36 H 0.148 0.852 37 H 0.261 0.739 38 H 0.121 0.879 39 H 0.114 0.886 40 H 0.177 0.823 41 H 0.171 0.829 42 H 0.176 0.824 43 H 0.089 0.911 44 H 0.117 0.883 45 H 0.199 0.801 46 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 0.359 7.446 -1.315 7.570 hybrid contribution 0.745 -0.239 0.121 0.792 sum 1.105 7.207 -1.194 7.388 Atomic orbital electron populations 1.86487 1.17409 1.82218 1.50538 1.25280 0.85265 1.11380 0.96610 0.93771 0.77834 0.74054 0.84977 1.20368 1.02017 0.94150 0.98882 1.20859 0.96380 0.94364 0.94031 1.21276 1.08267 0.92836 1.00094 1.96761 1.92409 1.11137 1.96733 1.18798 0.93089 0.91805 0.86191 1.86250 1.64633 1.39887 1.31044 1.22882 0.97861 0.94450 0.89436 1.20504 0.78047 0.87558 0.83831 1.90798 1.55472 1.20215 1.78072 1.45320 1.51282 1.16444 1.21571 1.21837 0.96137 0.94517 0.86510 0.89871 1.23384 0.93740 1.02146 0.96703 1.21733 0.92012 0.99848 0.94677 0.85899 1.19930 0.95477 0.92952 0.96714 1.21390 0.98207 0.98121 0.94005 1.21291 0.93365 0.98434 0.98809 1.21035 0.95532 0.96211 0.95313 1.98403 1.54905 1.96974 1.53243 1.20993 0.95573 0.90667 0.99946 1.98405 1.56822 1.52439 1.95528 1.21180 0.92866 1.01136 0.96372 1.23643 0.95334 0.98051 1.01247 1.21578 1.05515 0.92023 1.01561 1.21267 0.93646 1.00457 0.91888 0.75414 0.87857 1.23387 1.20087 0.84787 0.84737 0.85168 0.73927 0.87901 0.88621 0.82342 0.82864 0.82365 0.91119 0.88319 0.80088 0.81731 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.75 12.77 -148.98 -1.90 -1.16 16 2 C -0.08 0.23 2.82 71.24 0.20 0.43 16 3 Si 0.79 -4.99 29.78 68.60 2.04 -2.95 16 4 C -0.15 0.40 5.39 -19.85 -0.11 0.29 16 5 C -0.04 -0.08 9.35 22.27 0.21 0.13 16 6 C -0.14 -0.68 6.24 22.40 0.14 -0.54 16 7 Br -0.06 -0.49 33.16 -20.37 -0.68 -1.17 16 8 C 0.15 0.11 6.68 22.52 0.15 0.26 16 9 O -0.31 -0.85 9.01 -73.58 -0.66 -1.51 16 10 C 0.03 -0.24 5.22 71.23 0.37 0.13 16 11 C 0.51 -0.74 7.91 87.66 0.69 -0.05 16 12 O -0.57 -6.37 16.12 16.01 0.26 -6.12 16 13 N -0.69 6.36 5.26 -440.04 -2.32 4.05 16 14 C 0.12 -0.82 4.30 45.52 0.20 -0.62 16 15 H 0.08 -0.10 7.50 -2.39 -0.02 -0.12 16 16 C -0.12 1.40 7.29 31.12 0.23 1.63 16 17 C -0.06 0.72 3.87 -10.92 -0.04 0.68 16 18 H 0.12 -1.81 8.09 -2.39 -0.02 -1.83 16 19 C -0.05 0.35 5.29 -19.86 -0.11 0.24 16 20 C -0.10 0.61 8.62 22.27 0.19 0.80 16 21 C -0.10 0.27 9.83 22.29 0.22 0.49 16 22 C -0.05 -0.07 6.32 22.34 0.14 0.07 16 23 Cl -0.06 -0.23 27.96 -2.72 -0.08 -0.31 16 24 C -0.04 -0.03 6.32 22.34 0.14 0.12 16 25 Cl -0.06 -0.15 27.96 -2.72 -0.08 -0.23 16 26 C -0.10 0.42 9.49 22.29 0.21 0.63 16 27 C -0.14 1.15 7.27 31.21 0.23 1.38 16 28 C -0.19 1.35 9.04 22.36 0.20 1.56 16 29 C -0.05 0.40 8.66 22.26 0.19 0.59 16 30 H 0.40 -3.83 8.70 -74.05 -0.64 -4.47 16 31 H 0.10 -0.11 7.96 -2.39 -0.02 -0.13 16 32 H -0.31 -0.79 7.11 99.48 0.71 -0.08 16 33 H -0.27 0.90 7.11 99.48 0.71 1.60 16 34 H 0.13 0.41 8.06 -2.91 -0.02 0.39 16 35 H 0.14 -2.04 7.66 -2.38 -0.02 -2.06 16 36 H 0.13 -1.90 7.66 -2.39 -0.02 -1.92 16 37 H 0.42 -7.27 8.70 -92.71 -0.81 -8.08 16 38 H 0.10 -1.14 7.73 -2.39 -0.02 -1.16 16 39 H 0.10 -1.31 8.14 -2.39 -0.02 -1.33 16 40 H 0.16 -1.62 6.64 -2.91 -0.02 -1.64 16 41 H 0.15 -0.83 8.06 -2.91 -0.02 -0.85 16 42 H 0.16 -1.31 8.05 -2.91 -0.02 -1.34 16 43 H 0.07 -0.42 8.14 -2.38 -0.02 -0.43 16 44 H 0.10 -0.80 6.30 -2.39 -0.02 -0.81 16 45 H 0.18 -2.89 6.30 -2.91 -0.02 -2.91 16 46 H 0.17 -2.18 4.87 -2.91 -0.01 -2.20 16 Total: 0.00 -30.27 434.72 -0.27 -30.54 By element: Atomic # 1 Polarization: -29.03 SS G_CDS: -0.32 Total: -29.36 kcal Atomic # 6 Polarization: 4.75 SS G_CDS: 3.46 Total: 8.21 kcal Atomic # 7 Polarization: 6.36 SS G_CDS: -2.32 Total: 4.05 kcal Atomic # 8 Polarization: -6.48 SS G_CDS: -2.31 Total: -8.79 kcal Atomic # 14 Polarization: -4.99 SS G_CDS: 2.04 Total: -2.95 kcal Atomic # 17 Polarization: -0.39 SS G_CDS: -0.15 Total: -0.54 kcal Atomic # 35 Polarization: -0.49 SS G_CDS: -0.68 Total: -1.17 kcal Total: -30.27 -0.27 -30.54 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.064 kcal (2) G-P(sol) polarization free energy of solvation -30.265 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.201 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.273 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.538 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.474 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds