Wall clock time and date at job start Mon Mar 8 2021 04:40:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86300 * 109.47218 * 2 1 4 4 C 1.50697 * 109.47299 * 239.99648 * 2 1 3 5 5 C 1.32770 * 124.71519 * 300.00186 * 4 2 1 6 6 C 1.44424 * 113.08847 * 179.97438 * 5 4 2 7 7 C 1.47190 * 123.46536 * 179.97438 * 6 5 4 8 8 O 1.21639 * 119.99614 * 0.02562 * 7 6 5 9 9 N 1.34773 * 120.00124 * 180.02562 * 7 6 5 10 10 C 1.46502 * 120.00150 * 180.02562 * 9 7 6 11 11 H 1.09005 * 112.84772 * 23.80489 * 10 9 7 12 12 C 1.53781 * 113.61346 * 154.99446 * 10 9 7 13 13 C 1.53788 * 87.07832 * 89.12091 * 12 10 9 14 14 H 1.09000 * 113.60896 * 270.79859 * 13 12 10 15 15 C 1.50692 * 113.61290 * 139.97904 * 13 12 10 16 16 C 1.38224 * 119.98630 * 299.97483 * 15 13 12 17 17 C 1.38239 * 120.04028 * 180.02562 * 16 15 13 18 18 C 1.38305 * 120.00472 * 359.97438 * 17 16 15 19 19 Cl 1.73595 * 120.02354 * 180.02562 * 18 17 16 20 20 C 1.38489 * 119.95773 * 359.71004 * 18 17 16 21 21 Cl 1.73604 * 120.02167 * 180.29678 * 20 18 17 22 22 C 1.38256 * 119.97923 * 120.00218 * 15 13 12 23 23 C 1.53775 * 113.61479 * 252.49570 * 10 9 7 24 24 C 1.36009 * 113.07550 * 0.25049 * 6 5 4 25 25 S 1.70453 * 110.81707 * 359.61976 * 24 6 5 26 26 H 0.96703 * 113.99777 * 60.00332 * 1 2 3 27 27 H 1.09006 * 109.46654 * 120.00026 * 2 1 3 28 28 H 1.48503 * 109.99805 * 298.67812 * 3 2 1 29 29 H 1.48499 * 110.00049 * 59.99644 * 3 2 1 30 30 H 1.08004 * 123.45576 * 359.97438 * 5 4 2 31 31 H 0.97001 * 120.00197 * 359.97438 * 9 7 6 32 32 H 1.08994 * 113.61895 * 334.56913 * 12 10 9 33 33 H 1.08996 * 113.68697 * 203.67474 * 12 10 9 34 34 H 1.08005 * 119.97313 * 359.97438 * 16 15 13 35 35 H 1.08000 * 119.99872 * 179.97438 * 17 16 15 36 36 H 1.08002 * 119.99676 * 359.97438 * 22 15 13 37 37 H 1.09004 * 113.61539 * 156.33343 * 23 10 9 38 38 H 1.09003 * 113.61551 * 25.43356 * 23 10 9 39 39 H 1.08005 * 124.59227 * 179.73335 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.6690 -1.9764 -1.5326 6 6 2.2773 -2.4006 -2.7719 7 6 2.1353 -3.7581 -3.3229 8 8 1.4771 -4.5901 -2.7277 9 7 2.7344 -4.0791 -4.4866 10 6 2.5926 -5.4301 -5.0353 11 1 1.6975 -5.9399 -4.6788 12 6 2.7736 -5.4975 -6.5609 13 6 4.2739 -5.7056 -6.2947 14 1 4.8392 -4.7758 -6.2323 15 6 4.9139 -6.7196 -7.2075 16 6 4.4569 -8.0241 -7.2193 17 6 5.0435 -8.9553 -8.0557 18 6 6.0880 -8.5819 -8.8819 19 17 6.8246 -9.7508 -9.9329 20 6 6.5416 -7.2735 -8.8748 21 17 7.8475 -6.8012 -9.9167 22 6 5.9583 -6.3447 -8.0322 23 6 3.8713 -6.2771 -4.9250 24 6 2.9998 -1.4185 -3.3747 25 16 2.9441 0.0208 -2.4632 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5139 0.8901 28 1 1.5880 2.4585 -1.2243 29 1 1.5615 2.4679 1.2084 30 1 1.0628 -2.6226 -0.9151 31 1 3.2589 -3.4155 -4.9614 32 1 2.5461 -4.5607 -7.0695 33 1 2.2885 -6.3579 -7.0218 34 1 3.6415 -8.3160 -6.5740 35 1 4.6862 -9.9744 -8.0641 36 1 6.3149 -5.3253 -8.0225 37 1 3.6861 -7.3512 -4.9374 38 1 4.5301 -5.9696 -4.1128 39 1 3.5347 -1.5343 -4.3058 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9750034_6894386.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:40:43 Heat of formation + Delta-G solvation = 5.089625 kcal Electronic energy + Delta-G solvation = -26269.411730 eV Core-core repulsion = 22129.625721 eV Total energy + Delta-G solvation = -4139.786009 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.014 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.84277 -40.71615 -39.45426 -38.69960 -37.54823 -37.46156 -37.14175 -34.66290 -32.36555 -31.99068 -31.27431 -27.07549 -26.94429 -26.83449 -25.40081 -24.17854 -22.92133 -22.21635 -20.63158 -20.43508 -19.01271 -18.69208 -18.12373 -17.73297 -17.30542 -16.89211 -16.69913 -16.47697 -16.09939 -15.80402 -15.68153 -15.48256 -15.23026 -15.02737 -14.76250 -14.42975 -14.09936 -14.02466 -13.79842 -13.65581 -13.60129 -13.42900 -13.04863 -12.89860 -12.72946 -12.49289 -12.44500 -12.43490 -11.96069 -11.93063 -11.87357 -11.73419 -11.45525 -11.00206 -10.80357 -10.23282 -10.08624 -10.06034 -9.67304 -9.57206 -5.17139 -0.43538 -0.21277 -0.05189 0.27436 0.62421 0.80049 0.83743 1.13306 1.16834 1.46472 1.82093 1.96345 2.22872 2.28729 3.18935 3.20868 3.36603 3.45690 3.48936 3.52902 3.68728 3.75230 3.80276 3.88216 3.90815 4.05055 4.20818 4.23830 4.41051 4.42835 4.51385 4.51700 4.64106 4.66584 4.70088 4.79475 4.82008 4.91136 4.92517 5.00126 5.15351 5.23719 5.43057 5.45077 6.24838 6.35185 7.13244 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.522 6.522 2 C -0.033 4.033 3 Si 0.650 3.350 4 C -0.242 4.242 5 C -0.054 4.054 6 C -0.156 4.156 7 C 0.582 3.418 8 O -0.528 6.528 9 N -0.710 5.710 10 C 0.121 3.879 11 H 0.109 0.891 12 C -0.135 4.135 13 C -0.075 4.075 14 H 0.102 0.898 15 C -0.054 4.054 16 C -0.101 4.101 17 C -0.094 4.094 18 C -0.036 4.036 19 Cl -0.047 7.047 20 C -0.028 4.028 21 Cl -0.047 7.047 22 C -0.096 4.096 23 C -0.143 4.143 24 C -0.207 4.207 25 S 0.200 5.800 26 H 0.378 0.622 27 H 0.129 0.871 28 H -0.239 1.239 29 H -0.234 1.234 30 H 0.157 0.843 31 H 0.399 0.601 32 H 0.079 0.921 33 H 0.101 0.899 34 H 0.140 0.860 35 H 0.144 0.856 36 H 0.142 0.858 37 H 0.098 0.902 38 H 0.078 0.922 39 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.863 3.708 -0.720 4.211 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.145 4.145 3 Si 0.548 3.452 4 C -0.358 4.358 5 C -0.083 4.083 6 C -0.174 4.174 7 C 0.368 3.632 8 O -0.405 6.405 9 N -0.362 5.362 10 C 0.016 3.984 11 H 0.127 0.873 12 C -0.173 4.173 13 C -0.094 4.094 14 H 0.120 0.880 15 C -0.055 4.055 16 C -0.119 4.119 17 C -0.113 4.113 18 C -0.064 4.064 19 Cl -0.018 7.018 20 C -0.056 4.056 21 Cl -0.018 7.018 22 C -0.115 4.115 23 C -0.182 4.182 24 C -0.345 4.345 25 S 0.466 5.534 26 H 0.226 0.774 27 H 0.146 0.854 28 H -0.163 1.163 29 H -0.157 1.157 30 H 0.174 0.826 31 H 0.234 0.766 32 H 0.098 0.902 33 H 0.120 0.880 34 H 0.158 0.842 35 H 0.162 0.838 36 H 0.159 0.841 37 H 0.116 0.884 38 H 0.097 0.903 39 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges 2.060 5.025 -0.117 5.432 hybrid contribution -0.959 -1.462 -1.038 2.033 sum 1.101 3.563 -1.155 3.904 Atomic orbital electron populations 1.86650 1.17125 1.79848 1.49231 1.24412 0.83896 1.10008 0.96178 0.95331 0.91650 0.75013 0.83161 1.24757 1.08650 0.99091 1.03327 1.21050 0.98187 0.94393 0.94630 1.20222 1.04557 0.94619 0.98020 1.17607 0.78716 0.86573 0.80344 1.90834 1.39996 1.50408 1.59240 1.45497 1.53627 1.13337 1.23694 1.21842 0.99640 0.83116 0.93838 0.87279 1.23450 0.94565 1.03840 0.95454 1.21655 0.95714 0.97459 0.94534 0.88011 1.19734 0.94919 0.94595 0.96212 1.21111 1.00105 0.92206 0.98490 1.21086 0.94296 1.01108 0.94805 1.20854 0.98169 0.89650 0.97698 1.98415 1.81683 1.57237 1.64465 1.20819 0.94454 0.93002 0.97328 1.98416 1.46441 1.91878 1.65017 1.20951 0.96063 0.99427 0.95042 1.23593 0.97557 1.00723 0.96324 1.25801 1.04418 0.98983 1.05283 1.83141 1.46403 1.11017 1.12793 0.77412 0.85390 1.16298 1.15657 0.82555 0.76555 0.90201 0.88036 0.84184 0.83804 0.84068 0.88371 0.90307 0.81175 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.30 12.85 -35.23 -0.45 -0.75 16 2 C -0.03 0.03 2.95 36.00 0.11 0.14 16 3 Si 0.65 -1.24 30.91 -169.99 -5.25 -6.50 16 4 C -0.24 0.17 5.68 -36.18 -0.21 -0.03 16 5 C -0.05 -0.05 9.91 -39.02 -0.39 -0.44 16 6 C -0.16 -0.04 5.98 -104.63 -0.63 -0.67 16 7 C 0.58 0.95 7.79 -12.63 -0.10 0.85 16 8 O -0.53 -3.01 16.40 5.24 0.09 -2.93 16 9 N -0.71 1.25 5.23 -54.16 -0.28 0.96 16 10 C 0.12 -0.24 4.32 -67.12 -0.29 -0.53 16 11 H 0.11 -0.02 7.46 -51.93 -0.39 -0.41 16 12 C -0.14 0.50 7.29 -25.91 -0.19 0.31 16 13 C -0.08 0.27 3.86 -90.96 -0.35 -0.08 16 14 H 0.10 -0.47 8.09 -51.93 -0.42 -0.89 16 15 C -0.05 0.11 5.29 -104.62 -0.55 -0.44 16 16 C -0.10 0.21 8.61 -39.59 -0.34 -0.13 16 17 C -0.09 0.09 9.83 -39.56 -0.39 -0.30 16 18 C -0.04 -0.03 6.32 -39.46 -0.25 -0.28 16 19 Cl -0.05 -0.07 27.96 -51.86 -1.45 -1.52 16 20 C -0.03 -0.02 6.32 -39.46 -0.25 -0.27 16 21 Cl -0.05 -0.06 27.96 -51.86 -1.45 -1.51 16 22 C -0.10 0.10 9.49 -39.55 -0.38 -0.28 16 23 C -0.14 0.39 7.25 -25.92 -0.19 0.20 16 24 C -0.21 0.49 10.38 29.93 0.31 0.80 16 25 S 0.20 -0.49 20.18 -107.50 -2.17 -2.66 16 26 H 0.38 -0.89 8.70 45.56 0.40 -0.50 16 27 H 0.13 -0.22 7.96 -51.93 -0.41 -0.64 16 28 H -0.24 0.10 7.11 56.52 0.40 0.50 16 29 H -0.23 -0.24 7.11 56.52 0.40 0.16 16 30 H 0.16 0.32 8.06 -52.48 -0.42 -0.10 16 31 H 0.40 -1.78 7.20 -40.82 -0.29 -2.08 16 32 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 33 H 0.10 -0.39 7.72 -51.93 -0.40 -0.80 16 34 H 0.14 -0.56 6.65 -52.48 -0.35 -0.91 16 35 H 0.14 -0.35 8.06 -52.49 -0.42 -0.77 16 36 H 0.14 -0.37 8.05 -52.49 -0.42 -0.79 16 37 H 0.10 -0.31 6.31 -51.93 -0.33 -0.64 16 38 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 39 H 0.17 -0.92 7.01 -52.48 -0.37 -1.29 16 LS Contribution 374.55 15.07 5.64 5.64 Total: 0.00 -7.58 374.55 -13.28 -20.86 By element: Atomic # 1 Polarization: -6.57 SS G_CDS: -3.88 Total: -10.45 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: -4.08 Total: -1.15 kcal Atomic # 7 Polarization: 1.25 SS G_CDS: -0.28 Total: 0.96 kcal Atomic # 8 Polarization: -3.31 SS G_CDS: -0.37 Total: -3.68 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: -5.25 Total: -6.50 kcal Atomic # 16 Polarization: -0.49 SS G_CDS: -2.17 Total: -2.66 kcal Atomic # 17 Polarization: -0.14 SS G_CDS: -2.90 Total: -3.04 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -7.58 -13.28 -20.86 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_6894386.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.948 kcal (2) G-P(sol) polarization free energy of solvation -7.578 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.370 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.280 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.858 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.090 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds