Wall clock time and date at job start Mon Mar 8 2021 04:40:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37933 * 120.07546 * 2 1 4 4 C 1.38378 * 120.14663 * 180.02562 * 3 2 1 5 5 C 1.50703 * 119.85169 * 180.02562 * 4 3 2 6 6 C 1.38334 * 120.29492 * 359.97438 * 4 3 2 7 7 C 1.50703 * 119.92864 * 180.02562 * 6 4 3 8 8 O 1.42895 * 109.46753 * 75.00365 * 7 6 4 9 9 Si 1.86304 * 109.47019 * 195.00423 * 7 6 4 10 10 C 1.37986 * 120.14250 * 359.77154 * 6 4 3 11 11 C 1.39555 * 119.84901 * 0.48410 * 10 6 4 12 12 C 1.47846 * 120.13971 * 179.76696 * 11 10 6 13 13 O 1.21553 * 120.00106 * 173.74481 * 12 11 10 14 14 N 1.34779 * 120.00090 * 354.01488 * 12 11 10 15 15 C 1.46502 * 119.99678 * 179.72592 * 14 12 11 16 16 H 1.08999 * 112.85433 * 336.19536 * 15 14 12 17 17 C 1.53780 * 113.61479 * 107.50597 * 15 14 12 18 18 C 1.53787 * 87.08094 * 89.11329 * 17 15 14 19 19 H 1.09002 * 113.61674 * 270.88401 * 18 17 15 20 20 C 1.50695 * 113.68820 * 139.99511 * 18 17 15 21 21 C 1.38211 * 119.98060 * 142.46970 * 20 18 17 22 22 C 1.38350 * 119.99941 * 180.02562 * 21 20 18 23 23 Cl 1.73592 * 120.01691 * 179.97438 * 22 21 20 24 24 C 1.38443 * 119.96281 * 359.97438 * 22 21 20 25 25 Cl 1.73591 * 120.02105 * 179.97438 * 24 22 21 26 26 C 1.38349 * 119.95961 * 0.02562 * 24 22 21 27 27 C 1.38200 * 120.00024 * 359.72722 * 26 24 22 28 28 C 1.53777 * 87.08334 * 25.43332 * 18 17 15 29 29 H 1.08998 * 109.47117 * 263.38492 * 1 2 3 30 30 H 1.09003 * 109.46779 * 23.39298 * 1 2 3 31 31 H 1.09005 * 109.47088 * 143.38691 * 1 2 3 32 32 H 1.08004 * 119.92666 * 0.02562 * 3 2 1 33 33 H 1.08998 * 109.47736 * 89.99907 * 5 4 3 34 34 H 1.09004 * 109.46741 * 209.99490 * 5 4 3 35 35 H 1.08996 * 109.47481 * 329.99278 * 5 4 3 36 36 H 1.08995 * 109.47357 * 315.00156 * 7 6 4 37 37 H 0.96707 * 114.00093 * 60.00539 * 8 7 6 38 38 H 1.48495 * 109.99889 * 180.02562 * 9 7 6 39 39 H 1.48504 * 109.99700 * 301.31821 * 9 7 6 40 40 H 1.08004 * 120.07156 * 180.25381 * 10 6 4 41 41 H 0.96995 * 119.99952 * 359.72827 * 14 12 11 42 42 H 1.08994 * 113.61606 * 203.65993 * 17 15 14 43 43 H 1.08994 * 113.61334 * 334.56562 * 17 15 14 44 44 H 1.07993 * 119.99797 * 0.02562 * 21 20 18 45 45 H 1.08005 * 119.99903 * 179.97438 * 26 24 22 46 46 H 1.08009 * 119.98031 * 180.29596 * 27 26 24 47 47 H 1.08997 * 113.61892 * 220.02278 * 28 18 17 48 48 H 1.08997 * 113.69188 * 89.12313 * 28 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1983 1.1936 0.0000 4 6 3.5820 1.1953 -0.0005 5 6 4.3305 2.5034 0.0001 6 6 4.2813 0.0018 -0.0005 7 6 5.7883 0.0133 -0.0005 8 8 6.2619 0.3655 1.3008 9 14 6.4223 -1.6785 -0.4553 10 6 3.6021 -1.1993 0.0047 11 6 2.2066 -1.2080 -0.0001 12 6 1.4722 -2.4912 0.0003 13 8 0.2617 -2.4987 0.1108 14 7 2.1455 -3.6530 -0.1163 15 6 1.4183 -4.9248 -0.1099 16 1 0.4517 -4.8572 0.3894 17 6 1.3559 -5.6057 -1.4873 18 6 2.6780 -6.2986 -1.1171 19 1 3.5635 -5.7280 -1.3973 20 6 2.7488 -7.7397 -1.5521 21 6 3.9398 -8.2623 -2.0195 22 6 4.0051 -9.5851 -2.4194 23 17 5.5007 -10.2419 -3.0073 24 6 2.8771 -10.3848 -2.3505 25 17 2.9572 -12.0446 -2.8525 26 6 1.6857 -9.8600 -1.8823 27 6 1.6236 -8.5398 -1.4785 28 6 2.2694 -6.1186 0.3544 29 1 -0.3633 -0.1184 1.0208 30 1 -0.3633 0.9432 -0.4080 31 1 -0.3633 -0.8249 -0.6129 32 1 1.6583 2.1290 0.0004 33 1 4.5114 2.8181 1.0278 34 1 5.2833 2.3769 -0.5142 35 1 3.7385 3.2611 -0.5131 36 1 6.1461 0.7427 -0.7271 37 1 5.9812 -0.2417 1.9992 38 1 7.9072 -1.6806 -0.4582 39 1 5.9153 -2.6871 0.5097 40 1 4.1492 -2.1305 0.0089 41 1 3.1114 -3.6470 -0.2045 42 1 0.5179 -6.2941 -1.5965 43 1 1.4459 -4.9110 -2.3223 44 1 4.8195 -7.6381 -2.0726 45 1 0.8052 -10.4831 -1.8287 46 1 0.6945 -8.1317 -1.1085 47 1 3.0966 -5.8378 1.0061 48 1 1.6811 -6.9465 0.7500 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:40:52 Heat of formation + Delta-G solvation = 4.253984 kcal Electronic energy + Delta-G solvation = -32691.060823 eV Core-core repulsion = 28151.011093 eV Total energy + Delta-G solvation = -4540.049730 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.089 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -41.91827 -41.17042 -40.10753 -39.04461 -37.71772 -37.55901 -37.40526 -34.94755 -34.40217 -33.16928 -32.11770 -31.44904 -29.30235 -28.54718 -26.67590 -26.26391 -25.54648 -24.11463 -23.72703 -23.10922 -22.28816 -21.05946 -20.13358 -19.17365 -18.48488 -17.57754 -17.42610 -17.09896 -16.74014 -16.50657 -16.35886 -16.28652 -16.10638 -15.85128 -15.45516 -15.26826 -15.13767 -14.87130 -14.67373 -14.61314 -14.36621 -14.01809 -13.97261 -13.66882 -13.59454 -13.46415 -13.26042 -13.08209 -12.94255 -12.92058 -12.80781 -12.70026 -12.53744 -12.39226 -12.33046 -11.95037 -11.91116 -11.80932 -11.74115 -11.55876 -11.24989 -10.69471 -10.56176 -10.16078 -9.97812 -9.88636 -9.61906 -9.57250 -4.93903 -0.23725 -0.11840 0.07574 0.18260 0.81093 1.20870 1.29057 1.53833 1.74018 1.96375 2.04722 2.36595 2.65495 3.40726 3.43643 3.49957 3.55189 3.61816 3.69391 3.70980 3.73039 3.83063 3.93968 4.01999 4.11291 4.16663 4.20916 4.21782 4.39103 4.50556 4.53318 4.61173 4.65191 4.69695 4.70583 4.79617 4.79955 4.81466 4.84837 4.90055 4.93594 4.97216 5.03997 5.06636 5.10800 5.14476 5.17160 5.28574 5.41020 5.50487 5.52433 5.60384 5.64349 5.82315 6.45313 6.49495 7.15687 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.025 4.025 3 C -0.137 4.137 4 C -0.030 4.030 5 C -0.120 4.120 6 C -0.133 4.133 7 C -0.082 4.082 8 O -0.543 6.543 9 Si 0.754 3.246 10 C -0.073 4.073 11 C -0.158 4.158 12 C 0.560 3.440 13 O -0.560 6.560 14 N -0.700 5.700 15 C 0.114 3.886 16 H 0.092 0.908 17 C -0.139 4.139 18 C -0.069 4.069 19 H 0.118 0.882 20 C -0.049 4.049 21 C -0.099 4.099 22 C -0.044 4.044 23 Cl -0.061 7.061 24 C -0.054 4.054 25 Cl -0.064 7.064 26 C -0.099 4.099 27 C -0.097 4.097 28 C -0.127 4.127 29 H 0.068 0.932 30 H 0.072 0.928 31 H 0.080 0.920 32 H 0.144 0.856 33 H 0.075 0.925 34 H 0.077 0.923 35 H 0.078 0.922 36 H 0.126 0.874 37 H 0.385 0.615 38 H -0.303 1.303 39 H -0.261 1.261 40 H 0.147 0.853 41 H 0.410 0.590 42 H 0.104 0.896 43 H 0.073 0.927 44 H 0.157 0.843 45 H 0.155 0.845 46 H 0.162 0.838 47 H 0.085 0.915 48 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.362 2.487 -0.466 2.556 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.026 4.026 3 C -0.154 4.154 4 C -0.031 4.031 5 C -0.176 4.176 6 C -0.134 4.134 7 C -0.190 4.190 8 O -0.351 6.351 9 Si 0.658 3.342 10 C -0.091 4.091 11 C -0.161 4.161 12 C 0.350 3.650 13 O -0.440 6.440 14 N -0.352 5.352 15 C 0.009 3.991 16 H 0.110 0.890 17 C -0.178 4.178 18 C -0.087 4.087 19 H 0.136 0.864 20 C -0.050 4.050 21 C -0.117 4.117 22 C -0.072 4.072 23 Cl -0.032 7.032 24 C -0.081 4.081 25 Cl -0.035 7.035 26 C -0.118 4.118 27 C -0.115 4.115 28 C -0.165 4.165 29 H 0.086 0.914 30 H 0.091 0.909 31 H 0.099 0.901 32 H 0.162 0.838 33 H 0.094 0.906 34 H 0.096 0.904 35 H 0.097 0.903 36 H 0.144 0.856 37 H 0.234 0.766 38 H -0.231 1.231 39 H -0.187 1.187 40 H 0.164 0.836 41 H 0.248 0.752 42 H 0.123 0.877 43 H 0.092 0.908 44 H 0.174 0.826 45 H 0.173 0.827 46 H 0.179 0.821 47 H 0.104 0.896 48 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 0.381 2.046 -0.564 2.157 hybrid contribution 0.521 -0.216 0.988 1.137 sum 0.902 1.830 0.424 2.084 Atomic orbital electron populations 1.21029 0.90145 1.03320 1.02994 1.20217 0.96955 0.91996 0.93422 1.21187 0.93700 0.98017 1.02537 1.20214 0.93437 0.95928 0.93473 1.20939 1.00451 0.93092 1.03157 1.20078 0.96360 0.92664 1.04280 1.25205 0.91246 1.14351 0.88239 1.86597 1.76384 1.55054 1.17055 0.94325 0.77595 0.73526 0.88765 1.21315 0.92596 0.98405 0.96786 1.19652 0.93719 0.92808 1.09899 1.18394 0.86769 0.84303 0.75565 1.90741 1.15028 1.87459 1.50752 1.45535 1.11097 1.04705 1.73876 1.21897 0.96818 0.82320 0.98083 0.88967 1.23575 0.97549 0.99391 0.97246 1.21693 0.99920 0.90511 0.96594 0.86360 1.19898 0.92146 0.96334 0.96592 1.21180 0.99954 0.92132 0.98468 1.20983 0.87297 0.94874 1.04007 1.98404 1.31862 1.86149 1.86818 1.21042 0.95311 0.86768 1.04980 1.98401 1.98626 1.16776 1.89674 1.21298 0.96074 0.96668 0.97732 1.21388 0.99836 0.92143 0.98168 1.23432 1.00281 0.97295 0.95517 0.91383 0.90870 0.90125 0.83834 0.90617 0.90383 0.90279 0.85612 0.76568 1.23090 1.18670 0.83592 0.75220 0.87746 0.90815 0.82553 0.82702 0.82102 0.89648 0.87425 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.39 8.73 71.24 0.62 0.23 16 2 C -0.02 -0.06 5.91 -19.61 -0.12 -0.18 16 3 C -0.14 0.01 9.31 22.23 0.21 0.21 16 4 C -0.03 0.04 5.89 -19.81 -0.12 -0.08 16 5 C -0.12 0.41 9.53 71.24 0.68 1.09 16 6 C -0.13 0.36 5.25 -19.90 -0.10 0.26 16 7 C -0.08 0.34 2.04 71.24 0.15 0.49 16 8 O -0.54 0.62 12.80 -148.98 -1.91 -1.29 16 9 Si 0.75 -4.76 30.25 68.60 2.08 -2.69 16 10 C -0.07 0.24 8.13 22.53 0.18 0.43 16 11 C -0.16 -0.19 5.87 -20.09 -0.12 -0.30 16 12 C 0.56 1.48 7.70 86.79 0.67 2.15 16 13 O -0.56 -5.23 12.94 -3.88 -0.05 -5.28 16 14 N -0.70 2.85 5.21 -442.88 -2.31 0.54 16 15 C 0.11 -0.59 4.32 45.52 0.20 -0.39 16 16 H 0.09 -0.10 7.46 -2.39 -0.02 -0.12 16 17 C -0.14 1.01 7.26 31.12 0.23 1.23 16 18 C -0.07 0.63 3.85 -11.01 -0.04 0.59 16 19 H 0.12 -1.41 8.09 -2.39 -0.02 -1.43 16 20 C -0.05 0.29 5.29 -19.87 -0.11 0.18 16 21 C -0.10 0.31 9.49 22.29 0.21 0.52 16 22 C -0.04 -0.06 6.32 22.35 0.14 0.08 16 23 Cl -0.06 -0.20 27.96 -2.72 -0.08 -0.28 16 24 C -0.05 -0.09 6.32 22.35 0.14 0.05 16 25 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.32 16 26 C -0.10 0.26 9.83 22.29 0.22 0.47 16 27 C -0.10 0.57 8.60 22.27 0.19 0.76 16 28 C -0.13 1.15 7.29 31.12 0.23 1.37 16 29 H 0.07 0.32 8.14 -2.39 -0.02 0.30 16 30 H 0.07 0.00 8.04 -2.39 -0.02 -0.02 16 31 H 0.08 0.55 5.85 -2.38 -0.01 0.54 16 32 H 0.14 -0.44 8.06 -2.91 -0.02 -0.47 16 33 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 34 H 0.08 -0.33 6.22 -2.38 -0.01 -0.34 16 35 H 0.08 -0.42 8.08 -2.39 -0.02 -0.44 16 36 H 0.13 -0.69 6.48 -2.39 -0.02 -0.71 16 37 H 0.39 -2.45 8.70 -74.05 -0.64 -3.10 16 38 H -0.30 -0.70 7.11 99.48 0.71 0.01 16 39 H -0.26 1.51 6.67 99.48 0.66 2.17 16 40 H 0.15 -1.21 3.25 -2.91 -0.01 -1.22 16 41 H 0.41 -3.75 6.77 -92.71 -0.63 -4.38 16 42 H 0.10 -0.88 6.33 -2.39 -0.02 -0.90 16 43 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 44 H 0.16 -1.05 8.05 -2.91 -0.02 -1.08 16 45 H 0.16 -0.85 8.06 -2.91 -0.02 -0.88 16 46 H 0.16 -1.67 6.68 -2.91 -0.02 -1.69 16 47 H 0.08 -0.82 8.14 -2.39 -0.02 -0.84 16 48 H 0.11 -1.05 7.72 -2.39 -0.02 -1.07 16 Total: 0.00 -17.31 414.28 0.88 -16.42 By element: Atomic # 1 Polarization: -16.03 SS G_CDS: -0.23 Total: -16.26 kcal Atomic # 6 Polarization: 5.71 SS G_CDS: 3.46 Total: 9.17 kcal Atomic # 7 Polarization: 2.85 SS G_CDS: -2.31 Total: 0.54 kcal Atomic # 8 Polarization: -4.62 SS G_CDS: -1.96 Total: -6.57 kcal Atomic # 14 Polarization: -4.76 SS G_CDS: 2.08 Total: -2.69 kcal Atomic # 17 Polarization: -0.45 SS G_CDS: -0.15 Total: -0.60 kcal Total: -17.31 0.88 -16.42 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.678 kcal (2) G-P(sol) polarization free energy of solvation -17.307 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.371 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.883 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.424 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.254 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds