Wall clock time and date at job start Mon Mar 8 2021 04:41:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86304 * 109.47341 * 2 1 4 4 C 1.50701 * 109.46869 * 119.99795 * 2 1 3 5 5 C 1.34238 * 126.50414 * 255.03740 * 4 2 1 6 6 N 1.36831 * 109.93734 * 179.97438 * 5 4 2 7 7 C 1.46497 * 125.05946 * 180.27049 * 6 5 4 8 8 C 1.50706 * 109.46888 * 264.69854 * 7 6 5 9 9 O 1.21276 * 120.00049 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99784 * 180.02562 * 8 7 6 11 11 C 1.46500 * 119.99735 * 179.97438 * 10 8 7 12 12 H 1.09001 * 112.85146 * 25.33495 * 11 10 8 13 13 C 1.53786 * 113.61378 * 156.53074 * 11 10 8 14 14 C 1.53774 * 87.08427 * 89.11905 * 13 11 10 15 15 H 1.09005 * 113.61315 * 270.80359 * 14 13 11 16 16 C 1.50694 * 113.61860 * 139.98399 * 14 13 11 17 17 C 1.38204 * 119.98401 * 119.99862 * 16 14 13 18 18 C 1.38342 * 119.99811 * 179.97438 * 17 16 14 19 19 Cl 1.73605 * 120.01474 * 179.97438 * 18 17 16 20 20 C 1.38444 * 119.96675 * 359.97438 * 18 17 16 21 21 Cl 1.73599 * 120.02033 * 180.02562 * 20 18 17 22 22 C 1.38342 * 119.95706 * 0.02562 * 20 18 17 23 23 C 1.38201 * 120.00284 * 359.74316 * 22 20 18 24 24 C 1.53788 * 113.61774 * 254.13539 * 11 10 8 25 25 C 1.37695 * 109.87616 * 0.02562 * 6 5 4 26 26 C 1.39078 * 133.51168 * 180.02562 * 25 6 5 27 27 C 1.37791 * 119.77620 * 179.97438 * 26 25 6 28 28 C 1.38786 * 120.66938 * 0.02562 * 27 26 25 29 29 C 1.36658 * 120.52498 * 359.95710 * 28 27 26 30 30 C 1.39591 * 119.76648 * 0.04442 * 29 28 27 31 31 H 0.96698 * 114.00001 * 300.00562 * 1 2 3 32 32 H 1.08994 * 109.47069 * 239.99838 * 2 1 3 33 33 H 1.48495 * 110.00115 * 178.67799 * 3 2 1 34 34 H 1.48493 * 110.00164 * 300.00015 * 3 2 1 35 35 H 1.07994 * 125.02768 * 359.97438 * 5 4 2 36 36 H 1.09002 * 109.47359 * 24.69466 * 7 6 5 37 37 H 1.08997 * 109.47204 * 144.70083 * 7 6 5 38 38 H 0.96998 * 120.00549 * 0.02562 * 10 8 7 39 39 H 1.09004 * 113.61451 * 203.66888 * 13 11 10 40 40 H 1.09000 * 113.61381 * 334.47703 * 13 11 10 41 41 H 1.07996 * 119.99745 * 359.95693 * 17 16 14 42 42 H 1.08004 * 119.99700 * 179.97438 * 22 20 18 43 43 H 1.07999 * 119.98553 * 180.27675 * 23 22 20 44 44 H 1.09000 * 113.60953 * 25.43026 * 24 11 10 45 45 H 1.08995 * 113.61498 * 156.33489 * 24 11 10 46 46 H 1.08001 * 120.11439 * 359.95196 * 26 25 6 47 47 H 1.08001 * 119.66625 * 179.97438 * 27 26 25 48 48 H 1.08003 * 119.73668 * 179.97438 * 28 27 26 49 49 H 1.08006 * 120.11944 * 180.02562 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4601 -0.1376 2.3233 6 7 2.8017 -1.0990 3.2351 7 6 3.4005 -0.8400 4.5467 8 6 4.8992 -0.9646 4.4481 9 8 5.4160 -1.2428 3.3868 10 7 5.6650 -0.7678 5.5395 11 6 7.1218 -0.8895 5.4438 12 1 7.4969 -0.7031 4.4375 13 6 7.8778 -0.1149 6.5363 14 6 7.7750 -1.3847 7.3975 15 1 6.8704 -1.4289 8.0040 16 6 9.0238 -1.6813 8.1871 17 6 8.9709 -1.7404 9.5668 18 6 10.1171 -2.0132 10.2919 19 17 10.0512 -2.0869 12.0252 20 6 11.3166 -2.2275 9.6347 21 17 12.7555 -2.5706 10.5431 22 6 11.3677 -2.1680 8.2535 23 6 10.2208 -1.9000 7.5304 24 6 7.6757 -2.1757 6.0793 25 6 2.4937 -2.3457 2.7384 26 6 2.6285 -3.6362 3.2393 27 6 2.2154 -4.7107 2.4822 28 6 1.6657 -4.5195 1.2222 29 6 1.5238 -3.2602 0.7108 30 6 1.9355 -2.1571 1.4606 31 1 -0.3933 0.4418 0.7650 32 1 1.7923 -0.5138 -0.8899 33 1 3.5346 1.7703 0.0322 34 1 1.5616 2.4679 -1.2084 35 1 2.5958 0.9248 2.4623 36 1 3.1404 0.1672 4.8725 37 1 3.0225 -1.5643 5.2682 38 1 5.2516 -0.5464 6.3886 39 1 8.9000 0.1439 6.2601 40 1 7.3202 0.7320 6.9362 41 1 8.0349 -1.5733 10.0789 42 1 12.3032 -2.3346 7.7401 43 1 10.2602 -1.8580 6.4519 44 1 6.9544 -2.9923 6.1118 45 1 8.6427 -2.4793 5.6785 46 1 3.0557 -3.7955 4.2183 47 1 2.3213 -5.7121 2.8727 48 1 1.3474 -5.3726 0.6415 49 1 1.0947 -3.1189 -0.2703 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9750034_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:41:00 Heat of formation + Delta-G solvation = 45.123222 kcal Electronic energy + Delta-G solvation = -35174.063701 eV Core-core repulsion = 30313.908003 eV Total energy + Delta-G solvation = -4860.155699 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 431.084 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -42.53584 -41.80205 -40.56919 -39.24158 -38.00909 -37.58659 -37.57769 -37.42256 -34.80398 -33.99987 -32.34041 -31.79969 -31.23637 -30.14186 -29.00430 -27.02924 -26.58000 -25.61011 -24.26160 -23.71560 -23.08928 -22.60996 -21.90301 -20.63672 -20.44795 -18.96789 -18.50978 -18.41822 -17.69593 -17.44617 -17.23126 -16.87445 -16.74880 -16.39700 -16.34663 -16.02223 -15.82239 -15.58167 -15.34161 -15.29238 -15.13420 -14.90790 -14.69096 -14.61445 -14.38105 -14.07779 -13.93264 -13.85791 -13.67220 -13.56960 -13.32876 -13.09763 -12.93089 -12.61147 -12.55229 -12.51327 -12.48362 -12.13482 -12.03185 -12.00272 -11.96730 -11.80948 -11.69696 -11.53564 -11.17852 -10.45046 -10.34284 -10.24093 -10.12801 -9.71533 -9.04882 -8.55413 -5.04297 -0.25712 -0.09398 0.25371 0.76512 0.76663 1.13275 1.29934 1.34629 1.40011 1.63785 1.75956 2.01814 2.05325 2.18947 3.08773 3.12272 3.30454 3.31609 3.41179 3.46908 3.47877 3.61872 3.63430 3.72519 3.73856 3.76918 3.83425 3.85666 4.00471 4.04543 4.18172 4.29241 4.33767 4.34519 4.43980 4.46010 4.55896 4.56492 4.63237 4.69258 4.72637 4.74606 4.77335 4.83521 4.87483 4.88024 4.96400 5.15336 5.23109 5.32795 5.38734 5.62289 5.78299 5.83731 5.87681 6.08240 6.26915 6.33677 6.74164 6.92327 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.197 4.197 5 C 0.068 3.932 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.493 3.507 9 O -0.510 6.510 10 N -0.712 5.712 11 C 0.120 3.880 12 H 0.106 0.894 13 C -0.134 4.134 14 C -0.074 4.074 15 H 0.103 0.897 16 C -0.055 4.055 17 C -0.096 4.096 18 C -0.028 4.028 19 Cl -0.046 7.046 20 C -0.036 4.036 21 Cl -0.046 7.046 22 C -0.094 4.094 23 C -0.101 4.101 24 C -0.143 4.143 25 C 0.109 3.891 26 C -0.128 4.128 27 C -0.097 4.097 28 C -0.145 4.145 29 C -0.066 4.066 30 C -0.087 4.087 31 H 0.376 0.624 32 H 0.111 0.889 33 H -0.256 1.256 34 H -0.254 1.254 35 H 0.171 0.829 36 H 0.125 0.875 37 H 0.118 0.882 38 H 0.403 0.597 39 H 0.101 0.899 40 H 0.081 0.919 41 H 0.142 0.858 42 H 0.144 0.856 43 H 0.140 0.860 44 H 0.077 0.923 45 H 0.097 0.903 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.877 3.346 4.658 6.034 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.140 4.140 3 Si 0.583 3.417 4 C -0.205 4.205 5 C -0.056 4.056 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.277 3.723 9 O -0.384 6.384 10 N -0.365 5.365 11 C 0.015 3.985 12 H 0.124 0.876 13 C -0.172 4.172 14 C -0.092 4.092 15 H 0.121 0.879 16 C -0.056 4.056 17 C -0.114 4.114 18 C -0.056 4.056 19 Cl -0.017 7.017 20 C -0.063 4.063 21 Cl -0.017 7.017 22 C -0.113 4.113 23 C -0.119 4.119 24 C -0.182 4.182 25 C 0.004 3.996 26 C -0.148 4.148 27 C -0.116 4.116 28 C -0.164 4.164 29 C -0.084 4.084 30 C -0.091 4.091 31 H 0.223 0.777 32 H 0.128 0.872 33 H -0.181 1.181 34 H -0.179 1.179 35 H 0.188 0.812 36 H 0.143 0.857 37 H 0.136 0.864 38 H 0.238 0.762 39 H 0.119 0.881 40 H 0.099 0.901 41 H 0.160 0.840 42 H 0.162 0.838 43 H 0.157 0.843 44 H 0.096 0.904 45 H 0.116 0.884 46 H 0.132 0.868 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -0.668 3.485 3.409 4.921 hybrid contribution 0.303 -0.622 0.792 1.052 sum -0.365 2.863 4.201 5.097 Atomic orbital electron populations 1.86503 1.17511 1.81754 1.48915 1.24328 0.84629 1.08748 0.96301 0.95424 0.80966 0.77534 0.87735 1.20641 1.10016 0.92389 0.97434 1.21502 1.00954 0.93834 0.89311 1.43186 1.52769 1.04671 1.14362 1.21583 0.90586 1.05981 0.85270 1.21061 0.89601 0.77304 0.84304 1.90825 1.74298 1.45166 1.28063 1.45627 1.06446 1.72369 1.12090 1.21848 0.79610 0.96410 1.00637 0.87585 1.23428 1.01932 0.96567 0.95241 1.21694 0.95367 0.97347 0.94836 0.87909 1.19722 0.95203 0.98045 0.92613 1.20944 0.97169 0.99994 0.93340 1.20821 0.93885 1.04681 0.86212 1.98418 1.98621 1.96561 1.08081 1.20858 0.87886 1.04891 0.92694 1.98417 1.35988 1.93164 1.74160 1.21088 1.00039 0.99222 0.90950 1.21107 0.91284 0.98793 1.00748 1.23628 1.02572 0.97431 0.94531 1.18156 1.01238 0.85840 0.94317 1.19944 1.05017 0.89252 1.00617 1.20826 0.98330 0.97945 0.94472 1.20672 1.02425 0.96940 0.96405 1.20310 0.97967 0.90957 0.99181 1.18947 1.03361 0.92815 0.93951 0.77720 0.87176 1.18057 1.17900 0.81194 0.85748 0.86367 0.76244 0.88098 0.90079 0.84039 0.83803 0.84260 0.90407 0.88446 0.86771 0.85735 0.85930 0.85977 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.73 12.88 -35.23 -0.45 -1.19 16 2 C -0.03 -0.03 3.06 36.01 0.11 0.08 16 3 Si 0.68 -0.33 30.76 -169.99 -5.23 -5.56 16 4 C -0.20 -0.40 5.57 -102.71 -0.57 -0.97 16 5 C 0.07 0.01 9.89 -16.73 -0.17 -0.16 16 6 N -0.47 -0.22 2.27 -115.71 -0.26 -0.48 16 7 C 0.09 -0.33 6.48 -5.19 -0.03 -0.36 16 8 C 0.49 -0.54 7.90 -10.98 -0.09 -0.63 16 9 O -0.51 -2.22 16.04 5.56 0.09 -2.13 16 10 N -0.71 2.92 5.26 -53.01 -0.28 2.64 16 11 C 0.12 -0.38 4.30 -67.11 -0.29 -0.67 16 12 H 0.11 -0.10 7.50 -51.93 -0.39 -0.49 16 13 C -0.13 0.63 7.29 -25.92 -0.19 0.44 16 14 C -0.07 0.33 3.87 -90.82 -0.35 -0.02 16 15 H 0.10 -0.57 8.09 -51.93 -0.42 -0.99 16 16 C -0.06 0.14 5.29 -104.63 -0.55 -0.41 16 17 C -0.10 0.14 9.49 -39.56 -0.38 -0.23 16 18 C -0.03 -0.01 6.32 -39.47 -0.25 -0.26 16 19 Cl -0.05 -0.05 27.96 -51.86 -1.45 -1.50 16 20 C -0.04 -0.02 6.32 -39.47 -0.25 -0.27 16 21 Cl -0.05 -0.06 27.96 -51.86 -1.45 -1.51 16 22 C -0.09 0.11 9.83 -39.56 -0.39 -0.28 16 23 C -0.10 0.25 8.62 -39.58 -0.34 -0.10 16 24 C -0.14 0.49 7.27 -25.77 -0.19 0.30 16 25 C 0.11 0.32 6.80 -83.99 -0.57 -0.25 16 26 C -0.13 -0.27 10.00 -39.43 -0.39 -0.67 16 27 C -0.10 -0.19 10.01 -39.54 -0.40 -0.59 16 28 C -0.15 -0.36 9.97 -39.95 -0.40 -0.76 16 29 C -0.07 -0.23 10.05 -39.65 -0.40 -0.63 16 30 C -0.09 -0.34 6.35 -105.14 -0.67 -1.01 16 31 H 0.38 -1.05 8.70 45.56 0.40 -0.65 16 32 H 0.11 0.25 7.96 -51.93 -0.41 -0.17 16 33 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 34 H -0.25 -0.69 7.11 56.52 0.40 -0.29 16 35 H 0.17 -0.60 6.35 -52.49 -0.33 -0.93 16 36 H 0.12 -0.88 8.12 -51.93 -0.42 -1.30 16 37 H 0.12 -0.66 8.14 -51.93 -0.42 -1.08 16 38 H 0.40 -2.91 8.70 -40.82 -0.36 -3.26 16 39 H 0.10 -0.46 7.73 -51.93 -0.40 -0.86 16 40 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 41 H 0.14 -0.44 8.05 -52.49 -0.42 -0.86 16 42 H 0.14 -0.38 8.06 -52.48 -0.42 -0.80 16 43 H 0.14 -0.59 6.64 -52.49 -0.35 -0.94 16 44 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 45 H 0.10 -0.34 6.30 -51.93 -0.33 -0.67 16 46 H 0.11 0.01 8.06 -52.49 -0.42 -0.41 16 47 H 0.12 -0.02 8.06 -52.49 -0.42 -0.45 16 48 H 0.12 0.08 8.06 -52.48 -0.42 -0.35 16 49 H 0.12 0.34 8.06 -52.48 -0.42 -0.09 16 LS Contribution 440.90 15.07 6.64 6.64 Total: 0.00 -11.67 440.90 -15.15 -26.82 By element: Atomic # 1 Polarization: -10.28 SS G_CDS: -6.02 Total: -16.30 kcal Atomic # 6 Polarization: -0.70 SS G_CDS: -6.75 Total: -7.45 kcal Atomic # 7 Polarization: 2.71 SS G_CDS: -0.54 Total: 2.17 kcal Atomic # 8 Polarization: -2.95 SS G_CDS: -0.36 Total: -3.31 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: -5.23 Total: -5.56 kcal Atomic # 17 Polarization: -0.11 SS G_CDS: -2.90 Total: -3.01 kcal Total LS contribution 6.64 Total: 6.64 kcal Total: -11.67 -15.15 -26.82 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.947 kcal (2) G-P(sol) polarization free energy of solvation -11.668 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.278 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -15.155 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.823 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.123 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds