Wall clock time and date at job start Mon Mar 8 2021 04:41:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36775 * 125.79923 * 2 1 4 4 C 1.47264 * 126.94203 * 0.03433 * 3 2 1 5 5 O 1.21625 * 119.99733 * 359.97438 * 4 3 2 6 6 N 1.34772 * 119.99846 * 179.97438 * 4 3 2 7 7 C 1.46498 * 119.99855 * 180.02562 * 6 4 3 8 8 H 1.08996 * 112.84890 * 336.19609 * 7 6 4 9 9 C 1.53782 * 113.61813 * 107.49903 * 7 6 4 10 10 C 1.53778 * 87.07948 * 89.11458 * 9 7 6 11 11 H 1.09001 * 113.69674 * 270.87533 * 10 9 7 12 12 C 1.50703 * 113.61496 * 139.98405 * 10 9 7 13 13 C 1.38204 * 119.98342 * 142.50494 * 12 10 9 14 14 C 1.38345 * 119.99972 * 179.97438 * 13 12 10 15 15 Cl 1.73598 * 120.02000 * 179.97438 * 14 13 12 16 16 C 1.38445 * 119.96378 * 359.97438 * 14 13 12 17 17 Cl 1.73597 * 120.02051 * 180.02562 * 16 14 13 18 18 C 1.38343 * 119.95917 * 0.02562 * 16 14 13 19 19 C 1.38209 * 120.00333 * 359.74354 * 18 16 14 20 20 C 1.53777 * 87.08267 * 25.43660 * 10 9 7 21 21 C 1.46688 * 106.11652 * 180.02562 * 3 2 1 22 22 C 1.34495 * 106.32907 * 359.97438 * 21 3 2 23 23 C 1.50696 * 125.56810 * 180.02562 * 22 21 3 24 24 O 1.42899 * 109.47298 * 64.99853 * 23 22 21 25 25 Si 1.86304 * 109.47240 * 185.00005 * 23 22 21 26 26 N 1.34655 * 125.80611 * 180.02562 * 2 1 3 27 27 H 1.08997 * 109.47290 * 270.02028 * 1 2 3 28 28 H 1.08995 * 109.47779 * 30.02466 * 1 2 3 29 29 H 1.09003 * 109.46718 * 150.02414 * 1 2 3 30 30 H 0.96998 * 119.99983 * 359.97438 * 6 4 3 31 31 H 1.08996 * 113.61904 * 203.66881 * 9 7 6 32 32 H 1.09006 * 113.61093 * 334.56828 * 9 7 6 33 33 H 1.07997 * 119.99921 * 359.95060 * 13 12 10 34 34 H 1.08004 * 119.99783 * 179.97438 * 18 16 14 35 35 H 1.07992 * 119.98358 * 180.27741 * 19 18 16 36 36 H 1.09003 * 113.61295 * 220.01850 * 20 10 9 37 37 H 1.09001 * 113.61799 * 89.11771 * 20 10 9 38 38 H 1.07998 * 126.83575 * 180.26241 * 21 3 2 39 39 H 1.09004 * 109.47585 * 304.99974 * 23 22 21 40 40 H 0.96698 * 113.99776 * 59.99907 * 24 23 22 41 41 H 1.48505 * 109.99798 * 58.68046 * 25 23 22 42 42 H 1.48492 * 110.00118 * 179.97438 * 25 23 22 43 43 H 0.97009 * 124.84912 * 359.97438 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8701 2.5157 0.0007 5 8 0.6838 2.7839 0.0009 6 7 2.7848 3.5055 0.0011 7 6 2.3502 4.9045 0.0024 8 1 1.3469 5.0363 -0.4025 9 6 2.5725 5.6175 1.3467 10 6 3.9688 5.9961 0.8253 11 1 4.7358 5.2546 1.0488 12 6 4.3879 7.3982 1.1853 13 6 5.7034 7.6622 1.5170 14 6 6.0886 8.9493 1.8471 15 17 7.7406 9.2813 2.2644 16 6 5.1559 9.9724 1.8443 17 17 5.6378 11.5881 2.2576 18 6 3.8396 9.7063 1.5121 19 6 3.4574 8.4208 1.1780 20 6 3.3867 5.8721 -0.5927 21 6 3.6882 0.6153 -0.0006 22 6 3.6095 -0.7274 -0.0004 23 6 4.7820 -1.6741 -0.0003 24 8 5.5104 -1.5302 1.2207 25 14 4.1658 -3.4257 -0.1530 26 7 2.2948 -1.0921 -0.0005 27 1 -0.3634 0.0004 1.0276 28 1 -0.3634 0.8897 -0.5142 29 1 -0.3633 -0.8902 -0.5135 30 1 3.7309 3.2915 0.0013 31 1 1.9166 6.4743 1.5003 32 1 2.5942 4.9412 2.2013 33 1 6.4304 6.8636 1.5189 34 1 3.1113 10.5039 1.5101 35 1 2.4307 8.2144 0.9143 36 1 4.0657 5.4015 -1.3037 37 1 2.9534 6.7987 -0.9694 38 1 4.5890 1.2111 0.0032 39 1 5.4350 -1.4440 -0.8422 40 1 4.9904 -1.7199 2.0135 41 1 3.3796 -3.5803 -1.4034 42 1 5.3125 -4.3691 -0.1547 43 1 1.9734 -2.0074 -0.0005 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:41:05 Heat of formation + Delta-G solvation = 16.612523 kcal Electronic energy + Delta-G solvation = -28814.154860 eV Core-core repulsion = 24492.978885 eV Total energy + Delta-G solvation = -4321.175975 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.069 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.47984 -41.49582 -40.20423 -38.89596 -37.71100 -37.56676 -37.40641 -34.50469 -32.77740 -32.35786 -32.00580 -31.24792 -28.90325 -26.66176 -26.56840 -25.40135 -24.12722 -23.59723 -22.54606 -21.53783 -20.73995 -20.04822 -18.69107 -18.51522 -17.73984 -17.15283 -16.94419 -16.82438 -16.59642 -16.44437 -15.89769 -15.65559 -15.43022 -15.21457 -15.03980 -14.89739 -14.76513 -14.48014 -14.31570 -14.06802 -13.85798 -13.65770 -13.51013 -13.34440 -13.31318 -12.94654 -12.91183 -12.66698 -12.54852 -12.38811 -12.33679 -12.23931 -11.95079 -11.80984 -11.54385 -11.23496 -10.94763 -10.47074 -10.10228 -9.98739 -9.79527 -9.58993 -9.14267 -5.15154 -0.12555 0.06659 0.71540 0.80104 1.15476 1.19685 1.25931 1.51547 1.85325 2.04211 2.35777 2.41339 2.53768 3.45325 3.46586 3.54582 3.70099 3.71859 3.74889 3.89358 3.95246 4.02233 4.10596 4.12117 4.20340 4.24949 4.39765 4.45866 4.52240 4.67117 4.70039 4.74999 4.78038 4.80391 4.87314 4.91395 4.98905 5.04699 5.06370 5.10348 5.18437 5.29758 5.43159 5.59501 5.68853 5.72433 5.87950 6.44238 6.67218 6.72726 7.37353 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.119 3.881 3 C -0.266 4.266 4 C 0.590 3.410 5 O -0.584 6.584 6 N -0.700 5.700 7 C 0.117 3.883 8 H 0.089 0.911 9 C -0.140 4.140 10 C -0.066 4.066 11 H 0.112 0.888 12 C -0.050 4.050 13 C -0.100 4.100 14 C -0.044 4.044 15 Cl -0.061 7.061 16 C -0.053 4.053 17 Cl -0.062 7.062 18 C -0.098 4.098 19 C -0.097 4.097 20 C -0.125 4.125 21 C -0.138 4.138 22 C -0.025 4.025 23 C -0.037 4.037 24 O -0.549 6.549 25 Si 0.763 3.237 26 N -0.534 5.534 27 H 0.087 0.913 28 H 0.081 0.919 29 H 0.089 0.911 30 H 0.411 0.589 31 H 0.104 0.896 32 H 0.067 0.933 33 H 0.154 0.846 34 H 0.157 0.843 35 H 0.162 0.838 36 H 0.085 0.915 37 H 0.107 0.893 38 H 0.157 0.843 39 H 0.123 0.877 40 H 0.396 0.604 41 H -0.279 1.279 42 H -0.292 1.292 43 H 0.427 0.573 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.144 -5.726 0.180 6.117 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.001 4.001 3 C -0.275 4.275 4 C 0.381 3.619 5 O -0.466 6.466 6 N -0.351 5.351 7 C 0.011 3.989 8 H 0.107 0.893 9 C -0.178 4.178 10 C -0.085 4.085 11 H 0.130 0.870 12 C -0.050 4.050 13 C -0.118 4.118 14 C -0.071 4.071 15 Cl -0.032 7.032 16 C -0.080 4.080 17 Cl -0.033 7.033 18 C -0.117 4.117 19 C -0.115 4.115 20 C -0.163 4.163 21 C -0.162 4.162 22 C -0.133 4.133 23 C -0.148 4.148 24 O -0.356 6.356 25 Si 0.668 3.332 26 N -0.134 5.134 27 H 0.105 0.895 28 H 0.099 0.901 29 H 0.107 0.893 30 H 0.247 0.753 31 H 0.122 0.878 32 H 0.086 0.914 33 H 0.171 0.829 34 H 0.175 0.825 35 H 0.179 0.821 36 H 0.103 0.897 37 H 0.125 0.875 38 H 0.174 0.826 39 H 0.140 0.860 40 H 0.246 0.754 41 H -0.205 1.205 42 H -0.219 1.219 43 H 0.268 0.732 Dipole moment (debyes) X Y Z Total from point charges -2.276 -6.078 -0.618 6.520 hybrid contribution 1.058 0.474 -0.137 1.167 sum -1.219 -5.604 -0.755 5.784 Atomic orbital electron populations 1.20617 0.86060 1.04518 1.04214 1.20572 0.94299 0.85615 0.99609 1.20184 0.94095 0.91759 1.21493 1.17578 0.84995 0.84891 0.74468 1.90729 1.18064 1.84926 1.52893 1.45359 1.09962 1.04785 1.74975 1.21825 0.99355 0.80229 0.97495 0.89281 1.23574 0.95978 1.00892 0.97395 1.21631 0.97613 0.92140 0.97078 0.86969 1.19914 0.92013 0.96274 0.96804 1.21152 0.97345 0.94230 0.99113 1.20971 0.86157 0.94826 1.05165 1.98401 1.17353 1.95667 1.91792 1.21029 0.95018 0.86147 1.05852 1.98400 1.92103 1.20905 1.91941 1.21306 0.93138 0.98980 0.98234 1.21389 1.01338 0.90824 0.97966 1.23409 0.97415 0.99833 0.95642 1.21966 0.95418 0.93211 1.05578 1.20670 0.84736 0.95659 1.12244 1.24563 0.92207 1.07217 0.90810 1.86519 1.40485 1.92897 1.15679 0.94371 0.81645 0.72599 0.84585 1.41678 1.05162 1.08794 1.57803 0.89458 0.90072 0.89274 0.75269 0.87758 0.91402 0.82866 0.82529 0.82069 0.89675 0.87473 0.82570 0.85963 0.75386 1.20530 1.21859 0.73191 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.13 9.88 71.24 0.70 0.83 16 2 C 0.12 0.05 7.17 41.78 0.30 0.34 16 3 C -0.27 -0.77 6.29 -19.04 -0.12 -0.89 16 4 C 0.59 3.32 7.81 86.62 0.68 3.99 16 5 O -0.58 -7.12 14.41 -4.11 -0.06 -7.18 16 6 N -0.70 0.54 5.26 -443.46 -2.33 -1.79 16 7 C 0.12 -0.26 4.32 45.52 0.20 -0.07 16 8 H 0.09 0.16 7.46 -2.39 -0.02 0.14 16 9 C -0.14 0.60 7.25 31.12 0.23 0.83 16 10 C -0.07 0.43 3.86 -11.02 -0.04 0.38 16 11 H 0.11 -0.90 8.09 -2.39 -0.02 -0.92 16 12 C -0.05 0.18 5.29 -19.86 -0.11 0.08 16 13 C -0.10 0.11 9.49 22.29 0.21 0.32 16 14 C -0.04 -0.13 6.32 22.34 0.14 0.02 16 15 Cl -0.06 -0.28 27.96 -2.72 -0.08 -0.36 16 16 C -0.05 -0.15 6.32 22.34 0.14 -0.01 16 17 Cl -0.06 -0.29 27.96 -2.72 -0.08 -0.37 16 18 C -0.10 0.14 9.83 22.29 0.22 0.36 16 19 C -0.10 0.41 8.59 22.27 0.19 0.60 16 20 C -0.13 0.82 7.29 31.12 0.23 1.05 16 21 C -0.14 0.10 10.45 23.62 0.25 0.35 16 22 C -0.02 0.08 6.09 40.98 0.25 0.33 16 23 C -0.04 0.18 2.98 71.23 0.21 0.39 16 24 O -0.55 2.16 12.88 -148.98 -1.92 0.24 16 25 Si 0.76 -5.18 30.96 68.60 2.12 -3.05 16 26 N -0.53 2.38 5.41 -171.07 -0.93 1.46 16 27 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 28 H 0.08 0.32 6.47 -2.39 -0.02 0.31 16 29 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 30 H 0.41 -2.13 7.82 -92.71 -0.73 -2.85 16 31 H 0.10 -0.63 6.32 -2.39 -0.02 -0.64 16 32 H 0.07 -0.11 8.14 -2.38 -0.02 -0.13 16 33 H 0.15 -0.63 8.05 -2.91 -0.02 -0.65 16 34 H 0.16 -0.73 8.06 -2.91 -0.02 -0.75 16 35 H 0.16 -1.41 6.67 -2.91 -0.02 -1.43 16 36 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 37 H 0.11 -0.82 7.71 -2.39 -0.02 -0.84 16 38 H 0.16 -0.60 7.70 -2.91 -0.02 -0.63 16 39 H 0.12 -0.53 7.96 -2.38 -0.02 -0.54 16 40 H 0.40 -4.53 8.70 -74.06 -0.64 -5.17 16 41 H -0.28 0.60 7.11 99.48 0.71 1.31 16 42 H -0.29 -0.41 7.11 99.48 0.71 0.30 16 43 H 0.43 -4.33 6.72 -92.70 -0.62 -4.96 16 Total: 0.00 -20.63 388.62 -0.44 -21.06 By element: Atomic # 1 Polarization: -18.05 SS G_CDS: -0.85 Total: -18.90 kcal Atomic # 6 Polarization: 5.22 SS G_CDS: 3.68 Total: 8.90 kcal Atomic # 7 Polarization: 2.92 SS G_CDS: -3.26 Total: -0.34 kcal Atomic # 8 Polarization: -4.96 SS G_CDS: -1.98 Total: -6.94 kcal Atomic # 14 Polarization: -5.18 SS G_CDS: 2.12 Total: -3.05 kcal Atomic # 17 Polarization: -0.58 SS G_CDS: -0.15 Total: -0.73 kcal Total: -20.63 -0.44 -21.06 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.677 kcal (2) G-P(sol) polarization free energy of solvation -20.626 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.051 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.439 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.065 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds