Wall clock time and date at job start Mon Mar 8 2021 04:08:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42896 * 114.00409 * 2 1 4 4 H 1.09008 * 112.84659 * 341.19300 * 3 2 1 5 5 C 1.53775 * 113.69245 * 112.46457 * 3 2 1 6 6 C 1.53779 * 87.08438 * 139.99471 * 5 3 2 7 7 H 1.09002 * 113.61731 * 89.11293 * 6 5 3 8 8 N 1.46500 * 113.68825 * 220.00754 * 6 5 3 9 9 C 1.34778 * 119.99919 * 254.05902 * 8 6 5 10 10 O 1.21692 * 120.00006 * 0.02562 * 9 8 6 11 11 C 1.46677 * 119.99862 * 179.97438 * 9 8 6 12 12 C 1.37868 * 126.22984 * 179.71264 * 11 9 8 13 13 C 1.39835 * 107.08334 * 179.85213 * 12 11 9 14 14 C 1.50704 * 126.07147 * 180.16053 * 13 12 11 15 15 O 1.42909 * 109.46896 * 65.32934 * 14 13 12 16 16 Si 1.86298 * 109.47663 * 185.33084 * 14 13 12 17 17 C 1.35456 * 107.86621 * 0.42128 * 13 12 11 18 18 N 1.35533 * 108.86935 * 359.73714 * 17 13 12 19 19 C 1.53777 * 113.61697 * 210.00061 * 3 2 1 20 20 H 1.09008 * 109.46734 * 60.00133 * 1 2 3 21 21 H 1.08998 * 109.47668 * 179.97438 * 1 2 3 22 22 H 1.08997 * 109.47186 * 300.00819 * 1 2 3 23 23 H 1.08993 * 113.61636 * 25.43835 * 5 3 2 24 24 H 1.09008 * 113.61006 * 254.54078 * 5 3 2 25 25 H 0.96998 * 119.99853 * 74.06469 * 8 6 5 26 26 H 1.07998 * 126.46081 * 0.02562 * 12 11 9 27 27 H 1.09006 * 109.47261 * 305.33476 * 14 13 12 28 28 H 0.96695 * 113.99565 * 60.00281 * 15 14 13 29 29 H 1.48501 * 109.99975 * 58.67909 * 16 14 13 30 30 H 1.48496 * 110.00069 * 180.02562 * 16 14 13 31 31 H 1.07999 * 125.56412 * 179.71932 * 17 13 12 32 32 H 0.96998 * 125.67776 * 179.97438 * 18 17 13 33 33 H 1.08997 * 113.61941 * 105.38035 * 19 3 2 34 34 H 1.09009 * 113.68972 * 334.49114 * 19 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3137 2.0789 -0.3239 5 6 2.7532 1.6510 1.3013 6 6 3.8221 2.3198 0.4210 7 1 3.6209 3.3706 0.2123 8 7 5.1936 2.0830 0.8783 9 6 5.8831 3.0717 1.4810 10 8 5.3663 4.1611 1.6459 11 6 7.2561 2.8345 1.9394 12 6 8.0768 3.7502 2.5627 13 6 9.2882 3.1035 2.8265 14 6 10.4900 3.7117 3.5024 15 8 10.1642 4.0303 4.8569 16 14 11.9011 2.4957 3.4727 17 6 9.1920 1.8349 2.3614 18 7 7.9620 1.6587 1.8200 19 6 3.3755 1.3718 -0.7045 20 1 -0.3633 0.5139 -0.8901 21 1 -0.3634 -1.0276 -0.0005 22 1 -0.3633 0.5139 0.8899 23 1 3.1168 0.7771 1.8418 24 1 2.2132 2.3503 1.9397 25 1 5.6054 1.2146 0.7471 26 1 7.8296 4.7734 2.8045 27 1 10.7822 4.6202 2.9757 28 1 9.8947 3.2675 5.3864 29 1 12.2286 2.1319 2.0707 30 1 13.0921 3.0834 4.1369 31 1 9.9686 1.0863 2.4132 32 1 7.6339 0.8405 1.4153 33 1 3.3382 1.8456 -1.6854 34 1 3.9105 0.4220 -0.7133 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_10543058.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:20 Heat of formation + Delta-G solvation = -34.619562 kcal Electronic energy + Delta-G solvation = -18208.555110 eV Core-core repulsion = 15110.054738 eV Total energy + Delta-G solvation = -3098.500372 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -42.49965 -41.03368 -39.52850 -37.61517 -37.29454 -34.34981 -32.48425 -30.70297 -27.95983 -26.90568 -26.66834 -25.38727 -23.41317 -21.43369 -21.09706 -20.74359 -19.81421 -18.29988 -17.46741 -17.04428 -16.91347 -16.49725 -16.13707 -16.08367 -15.72544 -15.48889 -15.11554 -14.72085 -14.59054 -14.28521 -13.89921 -13.62035 -13.49795 -13.47941 -12.87729 -12.29295 -12.24225 -12.22333 -11.96500 -11.94041 -11.11962 -10.56815 -10.33800 -10.19691 -9.96052 -9.31516 -5.04460 0.39781 1.35244 1.49449 1.66325 1.90021 1.99394 2.03032 2.35172 2.81747 3.30663 3.42853 3.61869 3.68584 3.73013 3.79602 3.88492 4.02785 4.19776 4.34052 4.38781 4.39971 4.58264 4.59145 4.68655 4.69581 4.80514 4.86162 4.89147 4.96777 5.05579 5.34726 5.59233 5.79104 6.13826 6.19577 6.40255 6.72369 7.10644 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.094 0.906 5 C -0.168 4.168 6 C 0.126 3.874 7 H 0.121 0.879 8 N -0.720 5.720 9 C 0.592 3.408 10 O -0.524 6.524 11 C -0.060 4.060 12 C -0.075 4.075 13 C -0.211 4.211 14 C -0.033 4.033 15 O -0.542 6.542 16 Si 0.686 3.314 17 C 0.036 3.964 18 N -0.535 5.535 19 C -0.144 4.144 20 H 0.044 0.956 21 H 0.087 0.913 22 H 0.043 0.957 23 H 0.094 0.906 24 H 0.078 0.922 25 H 0.396 0.604 26 H 0.150 0.850 27 H 0.111 0.889 28 H 0.377 0.623 29 H -0.257 1.257 30 H -0.256 1.256 31 H 0.176 0.824 32 H 0.418 0.582 33 H 0.083 0.917 34 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.821 -6.364 -1.088 6.509 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.006 3.994 4 H 0.112 0.888 5 C -0.207 4.207 6 C 0.021 3.979 7 H 0.139 0.861 8 N -0.371 5.371 9 C 0.380 3.620 10 O -0.399 6.399 11 C -0.172 4.172 12 C -0.101 4.101 13 C -0.218 4.218 14 C -0.145 4.145 15 O -0.347 6.347 16 Si 0.588 3.412 17 C -0.101 4.101 18 N -0.131 5.131 19 C -0.182 4.182 20 H 0.062 0.938 21 H 0.106 0.894 22 H 0.062 0.938 23 H 0.112 0.888 24 H 0.096 0.904 25 H 0.230 0.770 26 H 0.168 0.832 27 H 0.129 0.871 28 H 0.224 0.776 29 H -0.182 1.182 30 H -0.181 1.181 31 H 0.193 0.807 32 H 0.256 0.744 33 H 0.102 0.898 34 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -0.226 -5.402 -1.530 5.619 hybrid contribution -0.483 -0.221 -0.571 0.779 sum -0.708 -5.622 -2.101 6.044 Atomic orbital electron populations 1.22837 0.80650 1.03100 1.00212 1.87929 1.20101 1.26830 1.94560 1.23445 0.93717 0.85866 0.96413 0.88827 1.24020 0.97435 1.01427 0.97841 1.22231 0.80066 1.00692 0.94917 0.86077 1.45779 1.15209 1.14760 1.61324 1.17083 0.83502 0.84243 0.77200 1.90875 1.69117 1.23957 1.55964 1.20400 0.94361 0.88179 1.14235 1.21232 0.91746 0.99189 0.97942 1.19900 0.98185 0.94446 1.09291 1.24378 1.00590 1.05618 0.83913 1.86507 1.89946 1.37977 1.20285 0.95189 0.77757 0.85291 0.82915 1.21876 0.88232 0.98387 1.01583 1.41927 1.12317 1.12194 1.46695 1.23626 0.95813 1.00251 0.98537 0.93767 0.89434 0.93783 0.88772 0.90373 0.77030 0.83207 0.87137 0.77582 1.18224 1.18079 0.80665 0.74417 0.89834 0.88582 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.34 10.72 -35.23 -0.38 -0.72 16 3 C 0.06 -0.05 4.31 -25.92 -0.11 -0.17 16 4 H 0.09 -0.18 7.87 -51.92 -0.41 -0.59 16 5 C -0.17 0.09 7.71 -25.92 -0.20 -0.11 16 6 C 0.13 -0.07 4.22 -67.12 -0.28 -0.36 16 7 H 0.12 0.08 7.50 -51.93 -0.39 -0.31 16 8 N -0.72 0.60 5.36 -54.32 -0.29 0.31 16 9 C 0.59 1.45 7.79 -12.85 -0.10 1.35 16 10 O -0.52 -3.42 16.50 5.20 0.09 -3.33 16 11 C -0.06 -0.07 7.06 -81.98 -0.58 -0.65 16 12 C -0.07 -0.18 10.59 -39.12 -0.41 -0.59 16 13 C -0.21 -0.05 5.43 -105.02 -0.57 -0.62 16 14 C -0.03 0.00 3.02 36.01 0.11 0.11 16 15 O -0.54 -0.53 12.88 -35.23 -0.45 -0.98 16 16 Si 0.69 -1.16 30.60 -169.99 -5.20 -6.36 16 17 C 0.04 -0.08 10.45 -16.91 -0.18 -0.26 16 18 N -0.54 1.29 5.99 -9.39 -0.06 1.24 16 19 C -0.14 0.26 7.66 -25.92 -0.20 0.06 16 20 H 0.04 -0.09 8.14 -51.92 -0.42 -0.51 16 21 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 22 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 23 H 0.09 -0.02 8.14 -51.93 -0.42 -0.45 16 24 H 0.08 -0.01 8.14 -51.92 -0.42 -0.43 16 25 H 0.40 -1.49 7.84 -40.82 -0.32 -1.81 16 26 H 0.15 0.51 8.06 -52.49 -0.42 0.09 16 27 H 0.11 0.10 7.96 -51.93 -0.41 -0.31 16 28 H 0.38 -1.15 8.70 45.56 0.40 -0.76 16 29 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 30 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 31 H 0.18 -0.95 6.21 -52.49 -0.33 -1.27 16 32 H 0.42 -2.41 8.19 -40.82 -0.33 -2.75 16 33 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 34 H 0.10 -0.21 8.11 -51.92 -0.42 -0.63 16 LS Contribution 294.63 15.07 4.44 4.44 Total: 0.00 -9.17 294.63 -7.66 -16.83 By element: Atomic # 1 Polarization: -6.88 SS G_CDS: -4.37 Total: -11.25 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: -1.43 Total: -0.17 kcal Atomic # 7 Polarization: 1.89 SS G_CDS: -0.35 Total: 1.55 kcal Atomic # 8 Polarization: -4.29 SS G_CDS: -0.75 Total: -5.03 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.20 Total: -6.36 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -9.17 -7.66 -16.83 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_10543058.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.789 kcal (2) G-P(sol) polarization free energy of solvation -9.174 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.963 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.656 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.830 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.620 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds