Wall clock time and date at job start Mon Mar 8 2021 04:08:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42896 * 114.00409 * 2 1 4 4 H 1.09008 * 112.84659 * 341.19300 * 3 2 1 5 5 C 1.53775 * 113.69245 * 112.46457 * 3 2 1 6 6 C 1.53779 * 87.08438 * 139.99471 * 5 3 2 7 7 H 1.09002 * 113.61731 * 89.11293 * 6 5 3 8 8 N 1.46500 * 113.68825 * 220.00754 * 6 5 3 9 9 C 1.34778 * 119.99919 * 254.05902 * 8 6 5 10 10 O 1.21692 * 120.00006 * 0.02562 * 9 8 6 11 11 C 1.46677 * 119.99862 * 179.97438 * 9 8 6 12 12 C 1.37868 * 126.22984 * 179.71264 * 11 9 8 13 13 C 1.39835 * 107.08334 * 179.85213 * 12 11 9 14 14 C 1.50704 * 126.07147 * 180.16053 * 13 12 11 15 15 O 1.42909 * 109.46896 * 65.32934 * 14 13 12 16 16 Si 1.86298 * 109.47663 * 185.33084 * 14 13 12 17 17 C 1.35456 * 107.86621 * 0.42128 * 13 12 11 18 18 N 1.35533 * 108.86935 * 359.73714 * 17 13 12 19 19 C 1.53777 * 113.61697 * 210.00061 * 3 2 1 20 20 H 1.09008 * 109.46734 * 60.00133 * 1 2 3 21 21 H 1.08998 * 109.47668 * 179.97438 * 1 2 3 22 22 H 1.08997 * 109.47186 * 300.00819 * 1 2 3 23 23 H 1.08993 * 113.61636 * 25.43835 * 5 3 2 24 24 H 1.09008 * 113.61006 * 254.54078 * 5 3 2 25 25 H 0.96998 * 119.99853 * 74.06469 * 8 6 5 26 26 H 1.07998 * 126.46081 * 0.02562 * 12 11 9 27 27 H 1.09006 * 109.47261 * 305.33476 * 14 13 12 28 28 H 0.96695 * 113.99565 * 60.00281 * 15 14 13 29 29 H 1.48501 * 109.99975 * 58.67909 * 16 14 13 30 30 H 1.48496 * 110.00069 * 180.02562 * 16 14 13 31 31 H 1.07999 * 125.56412 * 179.71932 * 17 13 12 32 32 H 0.96998 * 125.67776 * 179.97438 * 18 17 13 33 33 H 1.08997 * 113.61941 * 105.38035 * 19 3 2 34 34 H 1.09009 * 113.68972 * 334.49114 * 19 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3137 2.0789 -0.3239 5 6 2.7532 1.6510 1.3013 6 6 3.8221 2.3198 0.4210 7 1 3.6209 3.3706 0.2123 8 7 5.1936 2.0830 0.8783 9 6 5.8831 3.0717 1.4810 10 8 5.3663 4.1611 1.6459 11 6 7.2561 2.8345 1.9394 12 6 8.0768 3.7502 2.5627 13 6 9.2882 3.1035 2.8265 14 6 10.4900 3.7117 3.5024 15 8 10.1642 4.0303 4.8569 16 14 11.9011 2.4957 3.4727 17 6 9.1920 1.8349 2.3614 18 7 7.9620 1.6587 1.8200 19 6 3.3755 1.3718 -0.7045 20 1 -0.3633 0.5139 -0.8901 21 1 -0.3634 -1.0276 -0.0005 22 1 -0.3633 0.5139 0.8899 23 1 3.1168 0.7771 1.8418 24 1 2.2132 2.3503 1.9397 25 1 5.6054 1.2146 0.7471 26 1 7.8296 4.7734 2.8045 27 1 10.7822 4.6202 2.9757 28 1 9.8947 3.2675 5.3864 29 1 12.2286 2.1319 2.0707 30 1 13.0921 3.0834 4.1369 31 1 9.9686 1.0863 2.4132 32 1 7.6339 0.8405 1.4153 33 1 3.3382 1.8456 -1.6854 34 1 3.9105 0.4220 -0.7133 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_10543058.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:19 Heat of formation + Delta-G solvation = -38.858826 kcal Electronic energy + Delta-G solvation = -18208.738938 eV Core-core repulsion = 15110.054738 eV Total energy + Delta-G solvation = -3098.684200 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -42.49598 -41.03927 -39.63384 -37.63226 -37.31270 -34.43351 -32.47139 -30.72511 -27.87510 -26.85026 -26.65306 -25.36305 -23.43578 -21.47606 -21.08712 -20.72189 -19.79389 -18.28716 -17.49179 -17.06468 -16.87023 -16.55556 -16.09251 -16.07433 -15.79143 -15.48553 -15.09304 -14.73475 -14.59910 -14.34776 -13.93349 -13.54409 -13.48451 -13.47669 -12.80316 -12.27104 -12.25785 -12.18995 -11.97185 -11.89464 -11.32073 -10.51665 -10.32721 -10.27691 -9.96365 -9.29733 -4.92574 0.33476 1.42343 1.52081 1.74454 1.88609 2.09807 2.12325 2.21569 2.90208 3.37038 3.49198 3.68994 3.74475 3.78499 3.86575 3.98429 4.17401 4.27098 4.37061 4.49519 4.53172 4.65223 4.67241 4.68220 4.83006 4.85876 4.90099 4.91655 4.98091 5.02758 5.35657 5.57893 5.72213 6.21858 6.33015 6.51145 6.91311 7.01247 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.395 6.395 3 C 0.062 3.938 4 H 0.103 0.897 5 C -0.167 4.167 6 C 0.122 3.878 7 H 0.105 0.895 8 N -0.702 5.702 9 C 0.589 3.411 10 O -0.576 6.576 11 C -0.071 4.071 12 C -0.105 4.105 13 C -0.229 4.229 14 C -0.053 4.053 15 O -0.566 6.566 16 Si 0.804 3.196 17 C 0.063 3.937 18 N -0.515 5.515 19 C -0.131 4.131 20 H 0.052 0.948 21 H 0.093 0.907 22 H 0.046 0.954 23 H 0.093 0.907 24 H 0.069 0.931 25 H 0.412 0.588 26 H 0.122 0.878 27 H 0.090 0.910 28 H 0.393 0.607 29 H -0.274 1.274 30 H -0.310 1.310 31 H 0.219 0.781 32 H 0.437 0.563 33 H 0.092 0.908 34 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.301 -8.839 -1.725 9.011 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.314 6.314 3 C 0.003 3.997 4 H 0.120 0.880 5 C -0.206 4.206 6 C 0.017 3.983 7 H 0.123 0.877 8 N -0.353 5.353 9 C 0.378 3.622 10 O -0.456 6.456 11 C -0.184 4.184 12 C -0.132 4.132 13 C -0.235 4.235 14 C -0.162 4.162 15 O -0.374 6.374 16 Si 0.709 3.291 17 C -0.076 4.076 18 N -0.112 5.112 19 C -0.169 4.169 20 H 0.071 0.929 21 H 0.112 0.888 22 H 0.065 0.935 23 H 0.112 0.888 24 H 0.087 0.913 25 H 0.249 0.751 26 H 0.141 0.859 27 H 0.108 0.892 28 H 0.243 0.757 29 H -0.201 1.201 30 H -0.239 1.239 31 H 0.235 0.765 32 H 0.279 0.721 33 H 0.110 0.890 34 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 0.236 -7.942 -2.189 8.241 hybrid contribution -0.639 0.593 -0.340 0.935 sum -0.403 -7.349 -2.528 7.782 Atomic orbital electron populations 1.22962 0.79815 1.03754 1.00774 1.87892 1.21171 1.27636 1.94656 1.23537 0.94294 0.85670 0.96190 0.87959 1.23992 0.97462 1.01107 0.98014 1.22204 0.80050 1.00270 0.95824 0.87689 1.45628 1.14947 1.14826 1.59895 1.17302 0.84000 0.83968 0.76901 1.90842 1.70332 1.26112 1.58294 1.20093 0.93960 0.89418 1.14967 1.21237 0.93632 0.98772 0.99604 1.19958 0.97468 0.95555 1.10511 1.24758 1.02047 1.06030 0.83390 1.86459 1.90197 1.39734 1.21011 0.93915 0.72945 0.82715 0.79542 1.22417 0.88482 0.97933 0.98732 1.41867 1.11827 1.11789 1.45739 1.23564 0.94986 1.00159 0.98231 0.92939 0.88804 0.93514 0.88806 0.91255 0.75057 0.85947 0.89198 0.75690 1.20071 1.23895 0.76502 0.72108 0.88988 0.87611 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.39 -0.55 10.72 -148.98 -1.60 -2.15 16 3 C 0.06 -0.11 4.31 31.12 0.13 0.02 16 4 H 0.10 -0.40 7.87 -2.38 -0.02 -0.42 16 5 C -0.17 0.09 7.71 31.12 0.24 0.33 16 6 C 0.12 -0.08 4.22 45.52 0.19 0.11 16 7 H 0.11 0.32 7.50 -2.39 -0.02 0.31 16 8 N -0.70 1.06 5.36 -444.00 -2.38 -1.32 16 9 C 0.59 3.74 7.79 86.45 0.67 4.42 16 10 O -0.58 -9.25 16.50 -4.32 -0.07 -9.32 16 11 C -0.07 -0.22 7.06 40.35 0.28 0.06 16 12 C -0.11 -0.73 10.59 22.57 0.24 -0.49 16 13 C -0.23 -0.16 5.43 -20.12 -0.11 -0.27 16 14 C -0.05 -0.05 3.02 71.24 0.22 0.17 16 15 O -0.57 -1.75 12.88 -148.98 -1.92 -3.67 16 16 Si 0.80 -3.62 30.60 68.60 2.10 -1.53 16 17 C 0.06 -0.41 10.45 83.48 0.87 0.46 16 18 N -0.51 3.31 5.99 -183.62 -1.10 2.21 16 19 C -0.13 0.56 7.66 31.12 0.24 0.80 16 20 H 0.05 -0.24 8.14 -2.38 -0.02 -0.26 16 21 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 22 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 23 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 24 H 0.07 0.08 8.14 -2.38 -0.02 0.06 16 25 H 0.41 -3.57 7.84 -92.71 -0.73 -4.30 16 26 H 0.12 1.40 8.06 -2.91 -0.02 1.37 16 27 H 0.09 0.37 7.96 -2.38 -0.02 0.35 16 28 H 0.39 -2.29 8.70 -74.06 -0.64 -2.93 16 29 H -0.27 0.42 7.11 99.48 0.71 1.13 16 30 H -0.31 -1.44 7.11 99.48 0.71 -0.74 16 31 H 0.22 -3.30 6.21 -2.91 -0.02 -3.32 16 32 H 0.44 -6.23 8.19 -92.71 -0.76 -6.99 16 33 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 34 H 0.11 -0.63 8.11 -2.38 -0.02 -0.65 16 Total: 0.00 -24.85 294.63 -1.71 -26.56 By element: Atomic # 1 Polarization: -16.64 SS G_CDS: -0.95 Total: -17.59 kcal Atomic # 6 Polarization: 2.58 SS G_CDS: 4.21 Total: 6.79 kcal Atomic # 7 Polarization: 4.37 SS G_CDS: -3.48 Total: 0.89 kcal Atomic # 8 Polarization: -11.54 SS G_CDS: -3.59 Total: -15.13 kcal Atomic # 14 Polarization: -3.62 SS G_CDS: 2.10 Total: -1.53 kcal Total: -24.85 -1.71 -26.56 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_10543058.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.300 kcal (2) G-P(sol) polarization free energy of solvation -24.851 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.150 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.708 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.559 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.859 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds