Wall clock time and date at job start Mon Mar 8 2021 04:08:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42889 * 114.00043 * 2 1 4 4 H 1.09006 * 112.85136 * 341.19211 * 3 2 1 5 5 C 1.53783 * 113.69479 * 112.46502 * 3 2 1 6 6 C 1.53780 * 87.08206 * 139.99041 * 5 3 2 7 7 H 1.09003 * 113.69162 * 89.12774 * 6 5 3 8 8 N 1.46504 * 113.61457 * 220.02190 * 6 5 3 9 9 C 1.34781 * 119.99970 * 252.50106 * 8 6 5 10 10 O 1.21699 * 119.99570 * 5.20307 * 9 8 6 11 11 C 1.46668 * 120.00040 * 185.21125 * 9 8 6 12 12 C 1.37871 * 126.23399 * 5.63379 * 11 9 8 13 13 C 1.39840 * 107.08561 * 180.12384 * 12 11 9 14 14 C 1.50697 * 126.06729 * 179.83884 * 13 12 11 15 15 O 1.42908 * 109.47192 * 64.71768 * 14 13 12 16 16 Si 1.86301 * 109.47268 * 184.71156 * 14 13 12 17 17 C 1.35452 * 107.86414 * 359.57409 * 13 12 11 18 18 N 1.35529 * 108.87181 * 0.26919 * 17 13 12 19 19 C 1.46503 * 125.67968 * 180.02562 * 18 17 13 20 20 C 1.53779 * 87.08244 * 334.56946 * 6 5 3 21 21 H 1.09001 * 109.47210 * 60.00264 * 1 2 3 22 22 H 1.09003 * 109.47203 * 180.02562 * 1 2 3 23 23 H 1.09001 * 109.47237 * 299.99705 * 1 2 3 24 24 H 1.08997 * 113.60769 * 25.44253 * 5 3 2 25 25 H 1.08995 * 113.61333 * 254.54289 * 5 3 2 26 26 H 0.97000 * 120.00364 * 72.49780 * 8 6 5 27 27 H 1.07996 * 126.45735 * 359.95536 * 12 11 9 28 28 H 1.08998 * 109.47307 * 304.71347 * 14 13 12 29 29 H 0.96695 * 113.99913 * 59.99549 * 15 14 13 30 30 H 1.48503 * 109.99922 * 58.67958 * 16 14 13 31 31 H 1.48496 * 110.00368 * 180.02562 * 16 14 13 32 32 H 1.08001 * 125.56136 * 180.24306 * 17 13 12 33 33 H 1.08997 * 109.47537 * 85.92164 * 19 18 17 34 34 H 1.09005 * 109.47073 * 205.92602 * 19 18 17 35 35 H 1.09002 * 109.47103 * 325.92259 * 19 18 17 36 36 H 1.09005 * 113.61472 * 139.98488 * 20 6 5 37 37 H 1.09002 * 113.61331 * 270.88204 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0788 -0.3238 5 6 2.7531 1.6511 1.3013 6 6 3.8220 2.3198 0.4209 7 1 3.6222 3.3707 0.2116 8 7 5.1929 2.0818 0.8794 9 6 5.8939 3.0790 1.4547 10 8 5.3581 4.1483 1.6794 11 6 7.3023 2.8754 1.8096 12 6 8.0640 1.7639 1.5173 13 6 9.3404 1.9912 2.0414 14 6 10.5115 1.0457 1.9664 15 8 10.8998 0.8756 0.6016 16 14 11.9395 1.7478 2.9352 17 6 9.3390 3.2144 2.6232 18 7 8.1065 3.7620 2.4893 19 6 7.6983 5.0789 2.9848 20 6 3.3755 1.3718 -0.7046 21 1 -0.3634 0.5138 -0.8900 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3634 0.5138 0.8900 24 1 3.1168 0.7771 1.8417 25 1 2.2132 2.3503 1.9397 26 1 5.5962 1.2065 0.7691 27 1 7.7358 0.8826 0.9864 28 1 10.2270 0.0809 2.3862 29 1 11.1663 1.6954 0.1634 30 1 11.5386 1.9593 4.3494 31 1 13.1010 0.8250 2.8686 32 1 10.1822 3.6774 3.1140 33 1 7.9487 5.8392 2.2451 34 1 6.6225 5.0834 3.1607 35 1 8.2198 5.2938 3.9175 36 1 3.3382 1.8457 -1.6855 37 1 3.9095 0.4215 -0.7125 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_10803934.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:22 Heat of formation + Delta-G solvation = -29.397990 kcal Electronic energy + Delta-G solvation = -20238.320779 eV Core-core repulsion = 16984.509212 eV Total energy + Delta-G solvation = -3253.811567 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -42.54518 -40.98809 -39.48400 -37.69213 -37.21549 -34.59612 -33.60899 -30.83131 -28.38894 -27.83901 -26.81938 -25.88912 -25.23013 -23.20563 -21.33635 -21.13955 -20.26583 -18.79874 -18.19639 -17.65521 -16.91072 -16.80462 -16.67289 -16.19039 -16.09624 -15.76206 -15.35159 -15.26301 -15.11653 -14.69894 -14.36663 -14.04405 -13.55504 -13.52230 -13.51063 -13.30110 -13.16633 -12.80946 -12.23508 -12.19987 -12.18057 -11.90756 -11.89816 -10.98950 -10.51333 -10.30998 -10.10933 -9.69156 -9.25229 -5.02317 0.44464 1.37029 1.50929 1.55417 1.70076 2.02100 2.26456 2.35427 2.88631 3.37803 3.48871 3.59900 3.70605 3.76787 3.78580 3.82998 3.91621 4.18173 4.24465 4.26747 4.37065 4.41577 4.43110 4.62474 4.65845 4.67138 4.67488 4.74348 4.77720 4.87360 4.92156 5.00971 5.18661 5.43673 5.67834 5.90219 6.12096 6.19661 6.46119 6.70550 7.16284 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.168 4.168 6 C 0.128 3.872 7 H 0.120 0.880 8 N -0.706 5.706 9 C 0.593 3.407 10 O -0.547 6.547 11 C -0.055 4.055 12 C -0.112 4.112 13 C -0.208 4.208 14 C -0.031 4.031 15 O -0.543 6.543 16 Si 0.683 3.317 17 C 0.027 3.973 18 N -0.404 5.404 19 C 0.062 3.938 20 C -0.144 4.144 21 H 0.044 0.956 22 H 0.087 0.913 23 H 0.043 0.957 24 H 0.095 0.905 25 H 0.076 0.924 26 H 0.406 0.594 27 H 0.145 0.855 28 H 0.111 0.889 29 H 0.377 0.623 30 H -0.257 1.257 31 H -0.256 1.256 32 H 0.174 0.826 33 H 0.081 0.919 34 H 0.105 0.895 35 H 0.084 0.916 36 H 0.083 0.917 37 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.069 2.063 -0.711 2.183 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.293 6.293 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.207 4.207 6 C 0.023 3.977 7 H 0.138 0.862 8 N -0.357 5.357 9 C 0.381 3.619 10 O -0.427 6.427 11 C -0.168 4.168 12 C -0.138 4.138 13 C -0.214 4.214 14 C -0.142 4.142 15 O -0.348 6.348 16 Si 0.585 3.415 17 C -0.110 4.110 18 N -0.076 5.076 19 C -0.079 4.079 20 C -0.182 4.182 21 H 0.062 0.938 22 H 0.105 0.895 23 H 0.061 0.939 24 H 0.113 0.887 25 H 0.095 0.905 26 H 0.241 0.759 27 H 0.163 0.837 28 H 0.128 0.872 29 H 0.224 0.776 30 H -0.182 1.182 31 H -0.180 1.180 32 H 0.191 0.809 33 H 0.099 0.901 34 H 0.124 0.876 35 H 0.103 0.897 36 H 0.102 0.898 37 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -0.078 2.301 0.373 2.333 hybrid contribution -0.538 -0.530 0.024 0.756 sum -0.616 1.771 0.398 1.917 Atomic orbital electron populations 1.22832 0.80739 1.03080 1.00136 1.87942 1.20013 1.26826 1.94549 1.23448 0.93754 0.85825 0.96457 0.88919 1.24023 0.97419 1.01467 0.97826 1.22219 0.80003 1.00529 0.94937 0.86249 1.45551 1.14607 1.13991 1.61524 1.16998 0.84084 0.83833 0.76947 1.90794 1.71346 1.26017 1.54496 1.20011 0.92922 0.93711 1.10154 1.21201 0.92948 0.97248 1.02433 1.19784 0.97072 0.96622 1.07957 1.24321 0.99787 1.00713 0.89426 1.86485 1.87917 1.36600 1.23836 0.95102 0.78353 0.88108 0.79913 1.21859 0.88309 0.95215 1.05567 1.43814 1.08759 1.14480 1.40521 1.22377 1.04390 0.80908 1.00198 1.23640 0.95662 1.00454 0.98445 0.93785 0.89454 0.93864 0.88660 0.90534 0.75861 0.83695 0.87200 0.77558 1.18223 1.18043 0.80950 0.90084 0.87634 0.89698 0.89817 0.88338 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.56 10.72 -35.23 -0.38 -0.93 16 3 C 0.06 -0.02 4.31 -25.92 -0.11 -0.14 16 4 H 0.09 -0.15 7.87 -51.93 -0.41 -0.56 16 5 C -0.17 0.01 7.71 -25.92 -0.20 -0.19 16 6 C 0.13 -0.02 4.21 -67.12 -0.28 -0.30 16 7 H 0.12 0.08 7.53 -51.93 -0.39 -0.31 16 8 N -0.71 -0.13 5.33 -54.32 -0.29 -0.42 16 9 C 0.59 1.60 7.77 -12.86 -0.10 1.50 16 10 O -0.55 -2.91 14.29 5.19 0.07 -2.84 16 11 C -0.05 -0.11 6.88 -81.98 -0.56 -0.67 16 12 C -0.11 -0.11 10.28 -39.12 -0.40 -0.51 16 13 C -0.21 -0.09 5.43 -105.02 -0.57 -0.66 16 14 C -0.03 0.00 3.02 36.00 0.11 0.11 16 15 O -0.54 -0.27 12.88 -35.23 -0.45 -0.72 16 16 Si 0.68 -0.87 30.60 -169.99 -5.20 -6.07 16 17 C 0.03 -0.01 9.94 -16.91 -0.17 -0.18 16 18 N -0.40 -0.42 3.16 -120.24 -0.38 -0.80 16 19 C 0.06 -0.05 10.64 59.85 0.64 0.59 16 20 C -0.14 0.17 7.66 -25.92 -0.20 -0.03 16 21 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 22 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 23 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.09 0.05 8.14 -51.93 -0.42 -0.37 16 25 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 26 H 0.41 -0.69 7.68 -40.82 -0.31 -1.01 16 27 H 0.15 -0.08 7.49 -52.49 -0.39 -0.47 16 28 H 0.11 0.05 7.96 -51.93 -0.41 -0.36 16 29 H 0.38 -1.22 8.70 45.56 0.40 -0.82 16 30 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 31 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 32 H 0.17 -0.56 6.21 -52.49 -0.33 -0.89 16 33 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 34 H 0.11 0.11 6.21 -51.93 -0.32 -0.21 16 35 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 36 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 37 H 0.10 -0.12 8.12 -51.93 -0.42 -0.54 16 LS Contribution 312.81 15.07 4.71 4.71 Total: 0.00 -7.95 312.81 -7.84 -15.79 By element: Atomic # 1 Polarization: -4.14 SS G_CDS: -5.17 Total: -9.32 kcal Atomic # 6 Polarization: 1.34 SS G_CDS: -0.76 Total: 0.59 kcal Atomic # 7 Polarization: -0.55 SS G_CDS: -0.67 Total: -1.22 kcal Atomic # 8 Polarization: -3.74 SS G_CDS: -0.76 Total: -4.49 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: -5.20 Total: -6.07 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -7.95 -7.84 -15.79 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_10803934.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.604 kcal (2) G-P(sol) polarization free energy of solvation -7.951 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.555 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.843 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.794 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.398 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds