Wall clock time and date at job start Mon Mar 8 2021 04:08:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42889 * 114.00043 * 2 1 4 4 H 1.09006 * 112.85136 * 341.19211 * 3 2 1 5 5 C 1.53783 * 113.69479 * 112.46502 * 3 2 1 6 6 C 1.53780 * 87.08206 * 139.99041 * 5 3 2 7 7 H 1.09003 * 113.69162 * 89.12774 * 6 5 3 8 8 N 1.46504 * 113.61457 * 220.02190 * 6 5 3 9 9 C 1.34781 * 119.99970 * 252.50106 * 8 6 5 10 10 O 1.21699 * 119.99570 * 5.20307 * 9 8 6 11 11 C 1.46668 * 120.00040 * 185.21125 * 9 8 6 12 12 C 1.37871 * 126.23399 * 5.63379 * 11 9 8 13 13 C 1.39840 * 107.08561 * 180.12384 * 12 11 9 14 14 C 1.50697 * 126.06729 * 179.83884 * 13 12 11 15 15 O 1.42908 * 109.47192 * 64.71768 * 14 13 12 16 16 Si 1.86301 * 109.47268 * 184.71156 * 14 13 12 17 17 C 1.35452 * 107.86414 * 359.57409 * 13 12 11 18 18 N 1.35529 * 108.87181 * 0.26919 * 17 13 12 19 19 C 1.46503 * 125.67968 * 180.02562 * 18 17 13 20 20 C 1.53779 * 87.08244 * 334.56946 * 6 5 3 21 21 H 1.09001 * 109.47210 * 60.00264 * 1 2 3 22 22 H 1.09003 * 109.47203 * 180.02562 * 1 2 3 23 23 H 1.09001 * 109.47237 * 299.99705 * 1 2 3 24 24 H 1.08997 * 113.60769 * 25.44253 * 5 3 2 25 25 H 1.08995 * 113.61333 * 254.54289 * 5 3 2 26 26 H 0.97000 * 120.00364 * 72.49780 * 8 6 5 27 27 H 1.07996 * 126.45735 * 359.95536 * 12 11 9 28 28 H 1.08998 * 109.47307 * 304.71347 * 14 13 12 29 29 H 0.96695 * 113.99913 * 59.99549 * 15 14 13 30 30 H 1.48503 * 109.99922 * 58.67958 * 16 14 13 31 31 H 1.48496 * 110.00368 * 180.02562 * 16 14 13 32 32 H 1.08001 * 125.56136 * 180.24306 * 17 13 12 33 33 H 1.08997 * 109.47537 * 85.92164 * 19 18 17 34 34 H 1.09005 * 109.47073 * 205.92602 * 19 18 17 35 35 H 1.09002 * 109.47103 * 325.92259 * 19 18 17 36 36 H 1.09005 * 113.61472 * 139.98488 * 20 6 5 37 37 H 1.09002 * 113.61331 * 270.88204 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0788 -0.3238 5 6 2.7531 1.6511 1.3013 6 6 3.8220 2.3198 0.4209 7 1 3.6222 3.3707 0.2116 8 7 5.1929 2.0818 0.8794 9 6 5.8939 3.0790 1.4547 10 8 5.3581 4.1483 1.6794 11 6 7.3023 2.8754 1.8096 12 6 8.0640 1.7639 1.5173 13 6 9.3404 1.9912 2.0414 14 6 10.5115 1.0457 1.9664 15 8 10.8998 0.8756 0.6016 16 14 11.9395 1.7478 2.9352 17 6 9.3390 3.2144 2.6232 18 7 8.1065 3.7620 2.4893 19 6 7.6983 5.0789 2.9848 20 6 3.3755 1.3718 -0.7046 21 1 -0.3634 0.5138 -0.8900 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3634 0.5138 0.8900 24 1 3.1168 0.7771 1.8417 25 1 2.2132 2.3503 1.9397 26 1 5.5962 1.2065 0.7691 27 1 7.7358 0.8826 0.9864 28 1 10.2270 0.0809 2.3862 29 1 11.1663 1.6954 0.1634 30 1 11.5386 1.9593 4.3494 31 1 13.1010 0.8250 2.8686 32 1 10.1822 3.6774 3.1140 33 1 7.9487 5.8392 2.2451 34 1 6.6225 5.0834 3.1607 35 1 8.2198 5.2938 3.9175 36 1 3.3382 1.8457 -1.6855 37 1 3.9095 0.4215 -0.7125 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_10803934.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:21 Heat of formation + Delta-G solvation = -30.192100 kcal Electronic energy + Delta-G solvation = -20238.355214 eV Core-core repulsion = 16984.509212 eV Total energy + Delta-G solvation = -3253.846002 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.56957 -41.02198 -39.58704 -37.68321 -37.26195 -34.65310 -33.63312 -30.85539 -28.35446 -27.78458 -26.79646 -25.90704 -25.21764 -23.24554 -21.37897 -21.15923 -20.28124 -18.80543 -18.22464 -17.68556 -16.90684 -16.84013 -16.69925 -16.19149 -16.09032 -15.77978 -15.37953 -15.30950 -15.11670 -14.70276 -14.43431 -14.07318 -13.54590 -13.50022 -13.48265 -13.27352 -13.11618 -12.77458 -12.27571 -12.19999 -12.16434 -11.93242 -11.87901 -11.15510 -10.50459 -10.30196 -10.20142 -9.70909 -9.27472 -4.94022 0.37157 1.42347 1.51746 1.56272 1.74116 2.05257 2.22994 2.26715 2.92668 3.39757 3.51030 3.64720 3.72151 3.78106 3.82974 3.86958 4.04089 4.23335 4.28455 4.37655 4.39735 4.49633 4.53393 4.66456 4.67588 4.69571 4.72533 4.76778 4.83805 4.91787 4.93063 5.00026 5.18582 5.40481 5.66153 5.87019 6.16336 6.23781 6.41536 6.90852 7.05618 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.397 6.397 3 C 0.062 3.938 4 H 0.106 0.894 5 C -0.167 4.167 6 C 0.127 3.873 7 H 0.110 0.890 8 N -0.696 5.696 9 C 0.588 3.412 10 O -0.582 6.582 11 C -0.080 4.080 12 C -0.113 4.113 13 C -0.220 4.220 14 C -0.038 4.038 15 O -0.561 6.561 16 Si 0.781 3.219 17 C 0.037 3.963 18 N -0.412 5.412 19 C 0.061 3.939 20 C -0.134 4.134 21 H 0.053 0.947 22 H 0.092 0.908 23 H 0.047 0.953 24 H 0.088 0.912 25 H 0.071 0.929 26 H 0.415 0.585 27 H 0.154 0.846 28 H 0.101 0.899 29 H 0.393 0.607 30 H -0.283 1.283 31 H -0.305 1.305 32 H 0.204 0.796 33 H 0.088 0.912 34 H 0.083 0.917 35 H 0.111 0.889 36 H 0.094 0.906 37 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.487 2.316 -0.895 2.530 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.316 6.316 3 C 0.004 3.996 4 H 0.124 0.876 5 C -0.206 4.206 6 C 0.022 3.978 7 H 0.128 0.872 8 N -0.347 5.347 9 C 0.378 3.622 10 O -0.464 6.464 11 C -0.193 4.193 12 C -0.140 4.140 13 C -0.227 4.227 14 C -0.149 4.149 15 O -0.368 6.368 16 Si 0.687 3.313 17 C -0.100 4.100 18 N -0.084 5.084 19 C -0.079 4.079 20 C -0.172 4.172 21 H 0.072 0.928 22 H 0.111 0.889 23 H 0.065 0.935 24 H 0.107 0.893 25 H 0.090 0.910 26 H 0.252 0.748 27 H 0.172 0.828 28 H 0.118 0.882 29 H 0.243 0.757 30 H -0.210 1.210 31 H -0.233 1.233 32 H 0.220 0.780 33 H 0.106 0.894 34 H 0.102 0.898 35 H 0.129 0.871 36 H 0.112 0.888 37 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 0.448 2.544 0.155 2.588 hybrid contribution -0.694 -0.667 0.088 0.966 sum -0.246 1.877 0.243 1.908 Atomic orbital electron populations 1.22963 0.79794 1.03707 1.00827 1.87906 1.21223 1.27795 1.94654 1.23553 0.94257 0.85650 0.96131 0.87625 1.23987 0.97571 1.01041 0.98048 1.22206 0.79758 1.00307 0.95532 0.87163 1.45517 1.14599 1.13983 1.60591 1.17225 0.84572 0.83697 0.76750 1.90769 1.72095 1.27331 1.56172 1.20046 0.92860 0.94696 1.11693 1.21421 0.93235 0.97233 1.02081 1.19906 0.97005 0.97214 1.08527 1.24491 1.00409 1.00381 0.89573 1.86445 1.88016 1.38166 1.24206 0.93976 0.74244 0.86011 0.77052 1.22350 0.88507 0.94818 1.04375 1.44039 1.09079 1.14881 1.40378 1.22447 1.03409 0.80447 1.01633 1.23583 0.95020 1.00180 0.98445 0.92794 0.88949 0.93467 0.89338 0.90991 0.74806 0.82818 0.88187 0.75739 1.21006 1.23276 0.77982 0.89365 0.89798 0.87101 0.88758 0.88152 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.40 -1.25 10.72 -148.98 -1.60 -2.84 16 3 C 0.06 -0.03 4.31 31.12 0.13 0.10 16 4 H 0.11 -0.36 7.87 -2.38 -0.02 -0.38 16 5 C -0.17 -0.14 7.71 31.12 0.24 0.10 16 6 C 0.13 0.07 4.21 45.52 0.19 0.26 16 7 H 0.11 0.30 7.53 -2.39 -0.02 0.28 16 8 N -0.70 -0.95 5.33 -443.99 -2.37 -3.31 16 9 C 0.59 3.94 7.77 86.44 0.67 4.62 16 10 O -0.58 -7.26 14.29 -4.35 -0.06 -7.32 16 11 C -0.08 -0.37 6.88 40.34 0.28 -0.09 16 12 C -0.11 -0.25 10.28 22.57 0.23 -0.02 16 13 C -0.22 -0.08 5.43 -20.12 -0.11 -0.19 16 14 C -0.04 0.02 3.02 71.23 0.22 0.24 16 15 O -0.56 -0.31 12.88 -148.98 -1.92 -2.23 16 16 Si 0.78 -2.56 30.60 68.60 2.10 -0.46 16 17 C 0.04 -0.06 9.94 83.48 0.83 0.77 16 18 N -0.41 -0.80 3.16 -534.31 -1.69 -2.49 16 19 C 0.06 -0.09 10.64 127.77 1.36 1.27 16 20 C -0.13 0.30 7.66 31.12 0.24 0.54 16 21 H 0.05 -0.20 8.14 -2.39 -0.02 -0.22 16 22 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 23 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 24 H 0.09 0.19 8.14 -2.39 -0.02 0.18 16 25 H 0.07 0.12 8.14 -2.39 -0.02 0.10 16 26 H 0.41 -1.12 7.68 -92.71 -0.71 -1.83 16 27 H 0.15 -0.12 7.49 -2.91 -0.02 -0.15 16 28 H 0.10 0.11 7.96 -2.39 -0.02 0.09 16 29 H 0.39 -2.87 8.70 -74.06 -0.64 -3.51 16 30 H -0.28 -0.31 7.11 99.48 0.71 0.40 16 31 H -0.30 -1.51 7.11 99.48 0.71 -0.80 16 32 H 0.20 -1.79 6.21 -2.91 -0.02 -1.81 16 33 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 34 H 0.08 0.30 6.21 -2.38 -0.01 0.28 16 35 H 0.11 -0.79 8.14 -2.39 -0.02 -0.81 16 36 H 0.09 -0.39 8.14 -2.38 -0.02 -0.41 16 37 H 0.10 -0.25 8.12 -2.39 -0.02 -0.27 16 Total: 0.00 -19.24 312.81 -0.25 -19.49 By element: Atomic # 1 Polarization: -9.39 SS G_CDS: -0.23 Total: -9.62 kcal Atomic # 6 Polarization: 3.27 SS G_CDS: 5.51 Total: 8.78 kcal Atomic # 7 Polarization: -1.75 SS G_CDS: -4.06 Total: -5.80 kcal Atomic # 8 Polarization: -8.81 SS G_CDS: -3.58 Total: -12.39 kcal Atomic # 14 Polarization: -2.56 SS G_CDS: 2.10 Total: -0.46 kcal Total: -19.24 -0.25 -19.49 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_10803934.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.699 kcal (2) G-P(sol) polarization free energy of solvation -19.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.942 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.250 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.493 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.192 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds