Wall clock time and date at job start Mon Mar 8 2021 04:08:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42899 * 114.00320 * 2 1 4 4 H 1.08997 * 112.84738 * 341.20171 * 3 2 1 5 5 C 1.53785 * 113.68910 * 112.46317 * 3 2 1 6 6 C 1.53778 * 87.08064 * 139.99596 * 5 3 2 7 7 H 1.09003 * 113.69031 * 89.12700 * 6 5 3 8 8 N 1.46501 * 113.61517 * 220.01793 * 6 5 3 9 9 C 1.34778 * 120.00300 * 252.49984 * 8 6 5 10 10 O 1.21690 * 119.99706 * 4.82164 * 9 8 6 11 11 C 1.46678 * 119.99970 * 185.09794 * 9 8 6 12 12 C 1.37867 * 126.23629 * 354.36031 * 11 9 8 13 13 C 1.39829 * 107.08782 * 179.97438 * 12 11 9 14 14 C 1.35451 * 107.86418 * 359.97438 * 13 12 11 15 15 C 1.50707 * 125.56425 * 179.97438 * 14 13 12 16 16 O 1.42898 * 109.46696 * 150.02208 * 15 14 13 17 17 Si 1.86301 * 109.46809 * 30.02792 * 15 14 13 18 18 N 1.35531 * 108.87282 * 359.76921 * 14 13 12 19 19 C 1.46500 * 125.67940 * 180.23239 * 18 14 13 20 20 C 1.53775 * 113.61723 * 209.99774 * 3 2 1 21 21 H 1.08999 * 109.47102 * 179.97438 * 1 2 3 22 22 H 1.08997 * 109.47198 * 300.00338 * 1 2 3 23 23 H 1.08998 * 109.46764 * 59.99587 * 1 2 3 24 24 H 1.09000 * 113.61363 * 25.44243 * 5 3 2 25 25 H 1.09002 * 113.61563 * 254.54583 * 5 3 2 26 26 H 0.97004 * 119.99414 * 72.49258 * 8 6 5 27 27 H 1.08006 * 126.45637 * 359.96210 * 12 11 9 28 28 H 1.08000 * 126.07045 * 179.97438 * 13 12 11 29 29 H 1.08995 * 109.47165 * 270.02653 * 15 14 13 30 30 H 0.96705 * 113.99937 * 179.97438 * 16 15 14 31 31 H 1.48492 * 110.00302 * 59.99729 * 17 15 14 32 32 H 1.48500 * 109.99734 * 181.32059 * 17 15 14 33 33 H 1.09000 * 109.46930 * 276.00519 * 19 18 14 34 34 H 1.08992 * 109.47083 * 36.01304 * 19 18 14 35 35 H 1.09004 * 109.46887 * 156.00819 * 19 18 14 36 36 H 1.09002 * 113.61329 * 105.38647 * 20 3 2 37 37 H 1.08998 * 113.69187 * 334.49632 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0788 -0.3237 5 6 2.7532 1.6510 1.3014 6 6 3.8220 2.3198 0.4211 7 1 3.6222 3.3707 0.2119 8 7 5.1929 2.0818 0.8796 9 6 5.8939 3.0789 1.4549 10 8 5.3601 4.1504 1.6734 11 6 7.3017 2.8744 1.8122 12 6 8.0024 1.6907 1.7196 13 6 9.3040 1.9481 2.1608 14 6 9.3744 3.2557 2.5070 15 6 10.5984 3.9575 3.0370 16 8 10.5645 5.3323 2.6489 17 14 12.1267 3.1526 2.3388 18 7 8.1658 3.8312 2.2947 19 6 7.8334 5.2364 2.5415 20 6 3.3756 1.3718 -0.7044 21 1 -0.3633 -1.0277 -0.0005 22 1 -0.3633 0.5139 0.8899 23 1 -0.3633 0.5139 -0.8899 24 1 3.1168 0.7770 1.8418 25 1 2.2133 2.3502 1.9399 26 1 5.5961 1.2064 0.7692 27 1 7.6182 0.7430 1.3719 28 1 10.1102 1.2315 2.2157 29 1 10.6151 3.8871 4.1245 30 1 11.3234 5.8467 2.9568 31 1 12.1158 3.2418 0.8566 32 1 13.3411 3.8151 2.8787 33 1 7.5724 5.3690 3.5915 34 1 8.6929 5.8611 2.2990 35 1 6.9872 5.5245 1.9177 36 1 3.3382 1.8457 -1.6853 37 1 3.9105 0.4222 -0.7133 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_10803936.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:25 Heat of formation + Delta-G solvation = -28.033359 kcal Electronic energy + Delta-G solvation = -20334.911463 eV Core-core repulsion = 17081.159071 eV Total energy + Delta-G solvation = -3253.752392 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -42.47129 -40.95616 -39.45176 -37.92387 -37.20676 -34.50091 -33.43859 -31.38002 -27.97830 -27.37559 -26.96464 -26.75739 -24.70458 -22.89093 -21.33580 -21.20263 -20.09219 -18.70420 -18.50828 -18.11186 -17.00423 -16.83530 -16.58981 -16.24561 -16.05493 -15.91367 -15.31562 -15.06736 -14.74619 -14.53176 -14.31410 -13.93783 -13.64745 -13.51611 -13.45321 -13.09510 -12.98946 -12.77316 -12.49504 -12.19706 -12.14639 -12.05344 -11.87350 -10.99815 -10.72035 -10.48899 -10.05098 -9.64405 -8.98147 -4.98589 0.48715 1.11922 1.55400 1.70813 1.77470 1.97656 2.39958 2.45541 2.91237 2.97444 3.41066 3.51812 3.65217 3.77770 3.81013 3.88421 4.10364 4.26585 4.28245 4.42019 4.44433 4.45794 4.50852 4.64348 4.66990 4.70015 4.76023 4.89136 4.95194 4.95883 5.05865 5.08786 5.20922 5.49669 5.79885 6.07961 6.21265 6.22885 6.26639 6.53375 7.23866 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.168 4.168 6 C 0.128 3.872 7 H 0.119 0.881 8 N -0.706 5.706 9 C 0.593 3.407 10 O -0.547 6.547 11 C -0.056 4.056 12 C -0.134 4.134 13 C -0.201 4.201 14 C 0.058 3.942 15 C -0.057 4.057 16 O -0.541 6.541 17 Si 0.715 3.285 18 N -0.388 5.388 19 C 0.060 3.940 20 C -0.143 4.143 21 H 0.087 0.913 22 H 0.043 0.957 23 H 0.043 0.957 24 H 0.096 0.904 25 H 0.076 0.924 26 H 0.405 0.595 27 H 0.148 0.852 28 H 0.154 0.846 29 H 0.082 0.918 30 H 0.383 0.617 31 H -0.253 1.253 32 H -0.259 1.259 33 H 0.071 0.929 34 H 0.104 0.896 35 H 0.099 0.901 36 H 0.082 0.918 37 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.273 -2.688 0.605 3.035 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.293 6.293 3 C 0.005 3.995 4 H 0.110 0.890 5 C -0.207 4.207 6 C 0.023 3.977 7 H 0.137 0.863 8 N -0.357 5.357 9 C 0.381 3.619 10 O -0.426 6.426 11 C -0.170 4.170 12 C -0.160 4.160 13 C -0.225 4.225 14 C -0.060 4.060 15 C -0.166 4.166 16 O -0.350 6.350 17 Si 0.613 3.387 18 N -0.060 5.060 19 C -0.081 4.081 20 C -0.182 4.182 21 H 0.105 0.895 22 H 0.061 0.939 23 H 0.062 0.938 24 H 0.114 0.886 25 H 0.094 0.906 26 H 0.241 0.759 27 H 0.166 0.834 28 H 0.172 0.828 29 H 0.100 0.900 30 H 0.233 0.767 31 H -0.177 1.177 32 H -0.184 1.184 33 H 0.089 0.911 34 H 0.122 0.878 35 H 0.117 0.883 36 H 0.101 0.899 37 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 1.041 -1.750 0.048 2.037 hybrid contribution -0.044 1.040 0.321 1.090 sum 0.997 -0.710 0.370 1.279 Atomic orbital electron populations 1.22829 0.80762 1.03062 1.00131 1.87939 1.19992 1.26842 1.94557 1.23449 0.93735 0.85794 0.96507 0.88961 1.24025 0.97414 1.01481 0.97795 1.22206 0.80091 1.00492 0.94912 0.86343 1.45523 1.14614 1.14039 1.61560 1.17012 0.84161 0.83852 0.76827 1.90789 1.71238 1.25886 1.54695 1.20015 0.92213 0.90308 1.14484 1.21262 0.93861 0.96458 1.04437 1.20463 0.98583 0.94268 1.09148 1.19978 0.86008 0.93343 1.06683 1.24605 1.03720 0.85688 1.02546 1.86491 1.48689 1.19736 1.80049 0.94452 0.73112 0.89794 0.81309 1.43727 1.07746 1.09164 1.45365 1.22524 1.04368 0.78108 1.03081 1.23632 0.95657 1.00456 0.98420 0.89453 0.93856 0.93825 0.88596 0.90555 0.75884 0.83434 0.82829 0.90025 0.76698 1.17654 1.18416 0.91077 0.87751 0.88264 0.89899 0.88317 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.57 10.72 -35.23 -0.38 -0.95 16 3 C 0.06 -0.01 4.31 -25.92 -0.11 -0.12 16 4 H 0.09 -0.13 7.87 -51.93 -0.41 -0.54 16 5 C -0.17 -0.03 7.71 -25.92 -0.20 -0.23 16 6 C 0.13 0.03 4.21 -67.12 -0.28 -0.25 16 7 H 0.12 0.16 7.52 -51.93 -0.39 -0.24 16 8 N -0.71 -0.44 5.34 -54.32 -0.29 -0.73 16 9 C 0.59 2.22 7.77 -12.85 -0.10 2.12 16 10 O -0.55 -3.67 14.26 5.20 0.07 -3.60 16 11 C -0.06 -0.19 6.88 -81.98 -0.56 -0.75 16 12 C -0.13 -0.13 10.35 -39.12 -0.41 -0.54 16 13 C -0.20 -0.13 9.37 -39.98 -0.37 -0.51 16 14 C 0.06 0.12 6.18 -81.95 -0.51 -0.39 16 15 C -0.06 0.03 2.98 36.01 0.11 0.13 16 16 O -0.54 0.00 9.79 -35.23 -0.35 -0.34 16 17 Si 0.71 -1.13 31.10 -169.99 -5.29 -6.41 16 18 N -0.39 -1.42 3.16 -115.62 -0.37 -1.79 16 19 C 0.06 0.18 10.20 59.85 0.61 0.79 16 20 C -0.14 0.14 7.66 -25.92 -0.20 -0.06 16 21 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 22 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 23 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 24 H 0.10 0.06 8.14 -51.93 -0.42 -0.37 16 25 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 26 H 0.41 -0.71 7.63 -40.82 -0.31 -1.02 16 27 H 0.15 -0.31 7.45 -52.48 -0.39 -0.70 16 28 H 0.15 -0.39 6.85 -52.49 -0.36 -0.75 16 29 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 30 H 0.38 -1.55 8.74 45.56 0.40 -1.15 16 31 H -0.25 -0.58 7.11 56.52 0.40 -0.17 16 32 H -0.26 -0.03 7.11 56.52 0.40 0.37 16 33 H 0.07 0.17 8.14 -51.93 -0.42 -0.26 16 34 H 0.10 0.23 5.49 -51.93 -0.29 -0.05 16 35 H 0.10 0.41 6.12 -51.93 -0.32 0.10 16 36 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.10 -0.12 8.12 -51.93 -0.42 -0.54 16 LS Contribution 307.83 15.07 4.64 4.64 Total: 0.00 -8.33 307.83 -7.94 -16.27 By element: Atomic # 1 Polarization: -3.29 SS G_CDS: -5.06 Total: -8.35 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: -0.93 Total: 1.27 kcal Atomic # 7 Polarization: -1.86 SS G_CDS: -0.66 Total: -2.52 kcal Atomic # 8 Polarization: -4.24 SS G_CDS: -0.65 Total: -4.89 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: -5.29 Total: -6.41 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -8.33 -7.94 -16.27 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_10803936.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.764 kcal (2) G-P(sol) polarization free energy of solvation -8.330 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.094 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.269 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.033 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds