Wall clock time and date at job start Mon Mar 8 2021 04:08:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42899 * 114.00320 * 2 1 4 4 H 1.08997 * 112.84738 * 341.20171 * 3 2 1 5 5 C 1.53785 * 113.68910 * 112.46317 * 3 2 1 6 6 C 1.53778 * 87.08064 * 139.99596 * 5 3 2 7 7 H 1.09003 * 113.69031 * 89.12700 * 6 5 3 8 8 N 1.46501 * 113.61517 * 220.01793 * 6 5 3 9 9 C 1.34778 * 120.00300 * 252.49984 * 8 6 5 10 10 O 1.21690 * 119.99706 * 4.82164 * 9 8 6 11 11 C 1.46678 * 119.99970 * 185.09794 * 9 8 6 12 12 C 1.37867 * 126.23629 * 354.36031 * 11 9 8 13 13 C 1.39829 * 107.08782 * 179.97438 * 12 11 9 14 14 C 1.35451 * 107.86418 * 359.97438 * 13 12 11 15 15 C 1.50707 * 125.56425 * 179.97438 * 14 13 12 16 16 O 1.42898 * 109.46696 * 150.02208 * 15 14 13 17 17 Si 1.86301 * 109.46809 * 30.02792 * 15 14 13 18 18 N 1.35531 * 108.87282 * 359.76921 * 14 13 12 19 19 C 1.46500 * 125.67940 * 180.23239 * 18 14 13 20 20 C 1.53775 * 113.61723 * 209.99774 * 3 2 1 21 21 H 1.08999 * 109.47102 * 179.97438 * 1 2 3 22 22 H 1.08997 * 109.47198 * 300.00338 * 1 2 3 23 23 H 1.08998 * 109.46764 * 59.99587 * 1 2 3 24 24 H 1.09000 * 113.61363 * 25.44243 * 5 3 2 25 25 H 1.09002 * 113.61563 * 254.54583 * 5 3 2 26 26 H 0.97004 * 119.99414 * 72.49258 * 8 6 5 27 27 H 1.08006 * 126.45637 * 359.96210 * 12 11 9 28 28 H 1.08000 * 126.07045 * 179.97438 * 13 12 11 29 29 H 1.08995 * 109.47165 * 270.02653 * 15 14 13 30 30 H 0.96705 * 113.99937 * 179.97438 * 16 15 14 31 31 H 1.48492 * 110.00302 * 59.99729 * 17 15 14 32 32 H 1.48500 * 109.99734 * 181.32059 * 17 15 14 33 33 H 1.09000 * 109.46930 * 276.00519 * 19 18 14 34 34 H 1.08992 * 109.47083 * 36.01304 * 19 18 14 35 35 H 1.09004 * 109.46887 * 156.00819 * 19 18 14 36 36 H 1.09002 * 113.61329 * 105.38647 * 20 3 2 37 37 H 1.08998 * 113.69187 * 334.49632 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0788 -0.3237 5 6 2.7532 1.6510 1.3014 6 6 3.8220 2.3198 0.4211 7 1 3.6222 3.3707 0.2119 8 7 5.1929 2.0818 0.8796 9 6 5.8939 3.0789 1.4549 10 8 5.3601 4.1504 1.6734 11 6 7.3017 2.8744 1.8122 12 6 8.0024 1.6907 1.7196 13 6 9.3040 1.9481 2.1608 14 6 9.3744 3.2557 2.5070 15 6 10.5984 3.9575 3.0370 16 8 10.5645 5.3323 2.6489 17 14 12.1267 3.1526 2.3388 18 7 8.1658 3.8312 2.2947 19 6 7.8334 5.2364 2.5415 20 6 3.3756 1.3718 -0.7044 21 1 -0.3633 -1.0277 -0.0005 22 1 -0.3633 0.5139 0.8899 23 1 -0.3633 0.5139 -0.8899 24 1 3.1168 0.7770 1.8418 25 1 2.2133 2.3502 1.9399 26 1 5.5961 1.2064 0.7692 27 1 7.6182 0.7430 1.3719 28 1 10.1102 1.2315 2.2157 29 1 10.6151 3.8871 4.1245 30 1 11.3234 5.8467 2.9568 31 1 12.1158 3.2418 0.8566 32 1 13.3411 3.8151 2.8787 33 1 7.5724 5.3690 3.5915 34 1 8.6929 5.8611 2.2990 35 1 6.9872 5.5245 1.9177 36 1 3.3382 1.8457 -1.6853 37 1 3.9105 0.4222 -0.7133 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_10803936.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:24 Heat of formation + Delta-G solvation = -29.113754 kcal Electronic energy + Delta-G solvation = -20334.958312 eV Core-core repulsion = 17081.159071 eV Total energy + Delta-G solvation = -3253.799241 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.57030 -41.02645 -39.59841 -37.88512 -37.27642 -34.63670 -33.57144 -31.42948 -27.95086 -27.50367 -27.01985 -26.74408 -24.72391 -22.98682 -21.44854 -21.22979 -20.18922 -18.73732 -18.53061 -18.16250 -17.11881 -16.85003 -16.70571 -16.28626 -16.07860 -15.94154 -15.41162 -15.21664 -14.77049 -14.60617 -14.42941 -13.98907 -13.65659 -13.52171 -13.46530 -13.20066 -13.06002 -12.75654 -12.56565 -12.20580 -12.15148 -12.08940 -11.86657 -11.16130 -10.76646 -10.48930 -10.18371 -9.74469 -9.06201 -4.86551 0.34457 1.16911 1.58390 1.69600 1.75433 2.03431 2.28958 2.31247 2.93757 3.08778 3.40894 3.52231 3.63590 3.73415 3.79699 3.88153 3.99222 4.28591 4.29538 4.37778 4.40054 4.51232 4.54778 4.57043 4.69277 4.71592 4.76376 4.85343 4.93134 4.94677 5.00614 5.10090 5.17221 5.42515 5.76685 5.99954 6.14246 6.24789 6.44601 6.50961 7.08100 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.395 6.395 3 C 0.063 3.937 4 H 0.103 0.897 5 C -0.166 4.166 6 C 0.125 3.875 7 H 0.105 0.895 8 N -0.692 5.692 9 C 0.587 3.413 10 O -0.588 6.588 11 C -0.091 4.091 12 C -0.123 4.123 13 C -0.205 4.205 14 C 0.043 3.957 15 C -0.070 4.070 16 O -0.561 6.561 17 Si 0.811 3.189 18 N -0.407 5.407 19 C 0.066 3.934 20 C -0.132 4.132 21 H 0.093 0.907 22 H 0.046 0.954 23 H 0.052 0.948 24 H 0.093 0.907 25 H 0.069 0.931 26 H 0.418 0.582 27 H 0.178 0.822 28 H 0.187 0.813 29 H 0.101 0.899 30 H 0.400 0.600 31 H -0.307 1.307 32 H -0.280 1.280 33 H 0.071 0.929 34 H 0.109 0.891 35 H 0.080 0.920 36 H 0.092 0.908 37 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.031 -4.097 0.650 4.618 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.314 6.314 3 C 0.004 3.996 4 H 0.121 0.879 5 C -0.206 4.206 6 C 0.020 3.980 7 H 0.123 0.877 8 N -0.343 5.343 9 C 0.377 3.623 10 O -0.471 6.471 11 C -0.204 4.204 12 C -0.150 4.150 13 C -0.229 4.229 14 C -0.075 4.075 15 C -0.177 4.177 16 O -0.372 6.372 17 Si 0.714 3.286 18 N -0.080 5.080 19 C -0.075 4.075 20 C -0.170 4.170 21 H 0.112 0.888 22 H 0.065 0.935 23 H 0.071 0.929 24 H 0.111 0.889 25 H 0.087 0.913 26 H 0.256 0.744 27 H 0.195 0.805 28 H 0.204 0.796 29 H 0.119 0.881 30 H 0.252 0.748 31 H -0.235 1.235 32 H -0.206 1.206 33 H 0.089 0.911 34 H 0.127 0.873 35 H 0.099 0.901 36 H 0.110 0.890 37 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 1.786 -3.196 0.111 3.663 hybrid contribution -0.258 1.488 0.290 1.537 sum 1.528 -1.708 0.401 2.327 Atomic orbital electron populations 1.22961 0.79835 1.03747 1.00757 1.87903 1.21163 1.27651 1.94648 1.23529 0.94238 0.85651 0.96145 0.87888 1.23991 0.97444 1.01108 0.98009 1.22197 0.79898 1.00160 0.95786 0.87720 1.45441 1.14526 1.14003 1.60352 1.17264 0.84653 0.83751 0.76653 1.90758 1.72098 1.27531 1.56697 1.20234 0.92264 0.91408 1.16487 1.21722 0.93768 0.96691 1.02787 1.20969 0.99339 0.94342 1.08212 1.20615 0.86153 0.94274 1.06439 1.24941 1.03351 0.85526 1.03858 1.86441 1.50054 1.20275 1.80443 0.93404 0.70563 0.88183 0.76492 1.43911 1.08561 1.09229 1.46338 1.22382 1.03772 0.78683 1.02617 1.23573 0.94972 1.00260 0.98209 0.88816 0.93524 0.92919 0.88871 0.91265 0.74413 0.80485 0.79566 0.88113 0.74810 1.23519 1.20626 0.91081 0.87312 0.90145 0.88974 0.87661 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.39 -1.12 10.72 -148.98 -1.60 -2.71 16 3 C 0.06 -0.02 4.31 31.12 0.13 0.11 16 4 H 0.10 -0.29 7.87 -2.39 -0.02 -0.31 16 5 C -0.17 -0.19 7.71 31.12 0.24 0.05 16 6 C 0.12 0.17 4.21 45.52 0.19 0.36 16 7 H 0.10 0.46 7.52 -2.39 -0.02 0.45 16 8 N -0.69 -1.32 5.34 -444.00 -2.37 -3.69 16 9 C 0.59 5.35 7.77 86.45 0.67 6.02 16 10 O -0.59 -9.51 14.26 -4.32 -0.06 -9.57 16 11 C -0.09 -0.68 6.88 40.35 0.28 -0.41 16 12 C -0.12 -0.14 10.35 22.57 0.23 0.09 16 13 C -0.21 -0.01 9.37 22.01 0.21 0.20 16 14 C 0.04 0.17 6.18 41.35 0.26 0.42 16 15 C -0.07 0.10 2.98 71.24 0.21 0.32 16 16 O -0.56 -0.07 9.79 -148.98 -1.46 -1.53 16 17 Si 0.81 -3.28 31.10 68.60 2.13 -1.15 16 18 N -0.41 -3.43 3.16 -519.71 -1.64 -5.08 16 19 C 0.07 0.53 10.20 127.77 1.30 1.83 16 20 C -0.13 0.29 7.66 31.12 0.24 0.53 16 21 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 22 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 23 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 24 H 0.09 0.16 8.14 -2.39 -0.02 0.14 16 25 H 0.07 0.17 8.14 -2.39 -0.02 0.15 16 26 H 0.42 -1.59 7.63 -92.71 -0.71 -2.29 16 27 H 0.18 -1.08 7.45 -2.91 -0.02 -1.11 16 28 H 0.19 -1.44 6.85 -2.91 -0.02 -1.46 16 29 H 0.10 -0.54 7.96 -2.39 -0.02 -0.56 16 30 H 0.40 -3.31 8.74 -74.05 -0.65 -3.96 16 31 H -0.31 -1.61 7.11 99.48 0.71 -0.90 16 32 H -0.28 0.21 7.11 99.48 0.71 0.92 16 33 H 0.07 0.49 8.14 -2.39 -0.02 0.47 16 34 H 0.11 0.68 5.49 -2.39 -0.01 0.67 16 35 H 0.08 0.93 6.12 -2.39 -0.01 0.91 16 36 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 37 H 0.11 -0.35 8.12 -2.39 -0.02 -0.37 16 Total: 0.00 -21.30 307.83 -0.02 -21.32 By element: Atomic # 1 Polarization: -8.08 SS G_CDS: -0.22 Total: -8.30 kcal Atomic # 6 Polarization: 5.52 SS G_CDS: 5.19 Total: 10.71 kcal Atomic # 7 Polarization: -4.75 SS G_CDS: -4.01 Total: -8.77 kcal Atomic # 8 Polarization: -10.70 SS G_CDS: -3.12 Total: -13.82 kcal Atomic # 14 Polarization: -3.28 SS G_CDS: 2.13 Total: -1.15 kcal Total: -21.30 -0.02 -21.32 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_10803936.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.790 kcal (2) G-P(sol) polarization free energy of solvation -21.299 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.089 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.025 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.324 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.114 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds