Wall clock time and date at job start Mon Mar 8 2021 04:08:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42902 * 113.99903 * 2 1 4 4 H 1.08993 * 112.90736 * 341.24804 * 3 2 1 5 5 C 1.53962 * 113.66723 * 112.55150 * 3 2 1 6 6 C 1.53782 * 87.11063 * 139.88843 * 5 3 2 7 7 H 1.08997 * 113.61225 * 89.18406 * 6 5 3 8 8 N 1.46499 * 113.61191 * 220.09091 * 6 5 3 9 9 C 1.34783 * 119.99531 * 252.49880 * 8 6 5 10 10 O 1.21719 * 120.00145 * 0.02562 * 9 8 6 11 11 C 1.46568 * 119.99783 * 180.02562 * 9 8 6 12 12 C 1.40853 * 126.58103 * 180.02562 * 11 9 8 13 13 C 1.40093 * 132.86315 * 359.97438 * 12 11 9 14 14 C 1.36448 * 119.25137 * 179.97438 * 13 12 11 15 15 C 1.50709 * 120.29166 * 180.02562 * 14 13 12 16 16 O 1.42899 * 109.47060 * 120.00377 * 15 14 13 17 17 Si 1.86305 * 109.46828 * 240.00187 * 15 14 13 18 18 C 1.40150 * 119.41341 * 0.02562 * 14 13 12 19 19 C 1.35186 * 120.31879 * 359.97438 * 18 14 13 20 20 N 1.36248 * 120.70334 * 0.02562 * 19 18 14 21 21 N 1.40019 * 132.01043 * 180.02562 * 20 19 18 22 22 C 1.30735 * 109.60418 * 179.72708 * 21 20 19 23 23 C 1.53781 * 87.08260 * 334.63747 * 6 5 3 24 24 H 1.08998 * 109.46809 * 299.99633 * 1 2 3 25 25 H 1.08997 * 109.47166 * 60.00208 * 1 2 3 26 26 H 1.09001 * 109.46682 * 179.97438 * 1 2 3 27 27 H 1.08997 * 113.53543 * 25.33518 * 5 3 2 28 28 H 1.08998 * 113.73879 * 254.47115 * 5 3 2 29 29 H 0.96997 * 120.00777 * 72.49903 * 8 6 5 30 30 H 1.08000 * 120.37623 * 359.96238 * 13 12 11 31 31 H 1.09002 * 109.47034 * 0.02562 * 15 14 13 32 32 H 0.96705 * 113.99744 * 59.99394 * 16 15 14 33 33 H 1.48504 * 109.99474 * 179.97438 * 17 15 14 34 34 H 1.48496 * 110.00005 * 301.32135 * 17 15 14 35 35 H 1.08000 * 119.84589 * 180.02562 * 18 14 13 36 36 H 1.07998 * 119.64973 * 179.97438 * 19 18 14 37 37 H 1.08003 * 125.62979 * 180.26617 * 22 21 20 38 38 H 1.09002 * 113.61445 * 139.98212 * 23 6 5 39 39 H 1.09002 * 113.61408 * 270.79943 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3143 2.0797 -0.3227 5 6 2.7556 1.6501 1.3023 6 6 3.8253 2.3175 0.4218 7 1 3.6264 3.3689 0.2145 8 7 5.1960 2.0755 0.8788 9 6 5.8998 3.0704 1.4546 10 8 5.3964 4.1696 1.5953 11 6 7.2713 2.8286 1.9113 12 6 8.1276 3.7617 2.5279 13 6 7.9737 5.1090 2.8797 14 6 9.0090 5.7635 3.4811 15 6 8.8688 7.2127 3.8700 16 8 9.0476 7.3466 5.2814 17 14 10.1591 8.2215 2.9820 18 6 10.2039 5.0760 3.7339 19 6 10.3300 3.7759 3.3857 20 7 9.3020 3.1137 2.7848 21 7 9.1738 1.7947 2.3328 22 6 7.9825 1.6194 1.8235 23 6 3.3756 1.3719 -0.7045 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 3.1177 0.7747 1.8413 28 1 2.2189 2.3497 1.9431 29 1 5.5971 1.1995 0.7670 30 1 7.0462 5.6238 2.6770 31 1 7.8759 7.5684 3.5945 32 1 9.9111 7.0482 5.5984 33 1 10.0310 9.6528 3.3566 34 1 11.5161 7.7257 3.3249 35 1 11.0276 5.5871 4.2099 36 1 11.2558 3.2567 3.5852 37 1 7.6074 0.6980 1.4031 38 1 3.3385 1.8471 -1.6848 39 1 3.9083 0.4209 -0.7150 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_11618758.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:28 Heat of formation + Delta-G solvation = 26.968290 kcal Electronic energy + Delta-G solvation = -24110.965513 eV Core-core repulsion = 20409.493839 eV Total energy + Delta-G solvation = -3701.471674 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.126 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -43.30326 -40.99853 -39.67930 -39.22496 -37.35141 -37.15038 -34.30491 -33.90877 -32.11430 -30.34309 -27.89623 -27.31618 -26.73674 -25.50791 -24.67154 -23.38789 -22.96777 -21.32064 -20.86125 -19.04098 -18.65393 -18.26715 -17.81969 -17.45464 -16.96367 -16.76302 -16.56742 -16.16173 -16.07308 -15.89525 -15.52746 -15.37212 -15.02662 -14.81926 -14.51590 -14.25175 -13.85278 -13.56085 -13.47486 -13.41915 -13.25144 -12.75628 -12.49834 -12.18620 -12.11263 -12.06610 -11.91501 -11.83425 -11.56338 -10.91597 -10.73558 -10.45767 -10.37424 -9.94510 -8.77045 -5.06350 -0.56516 -0.16695 0.98720 1.06745 1.11337 1.47369 1.79902 2.05279 2.22320 2.59148 2.91611 3.06956 3.14314 3.27017 3.41202 3.47920 3.56717 3.62257 3.83810 3.84361 3.86817 3.98505 4.11473 4.24020 4.28694 4.36975 4.46238 4.49348 4.49950 4.69635 4.72574 4.73243 4.78062 4.94497 4.99756 5.06463 5.11060 5.16109 5.26470 5.60745 5.63171 6.20945 6.24170 6.30751 6.64000 7.40956 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.063 3.937 4 H 0.092 0.908 5 C -0.169 4.169 6 C 0.129 3.871 7 H 0.120 0.880 8 N -0.716 5.716 9 C 0.603 3.397 10 O -0.549 6.549 11 C -0.316 4.316 12 C 0.170 3.830 13 C -0.090 4.090 14 C -0.066 4.066 15 C -0.075 4.075 16 O -0.521 6.521 17 Si 0.696 3.304 18 C -0.162 4.162 19 C 0.123 3.877 20 N -0.267 5.267 21 N -0.313 5.313 22 C 0.121 3.879 23 C -0.144 4.144 24 H 0.043 0.957 25 H 0.043 0.957 26 H 0.086 0.914 27 H 0.094 0.906 28 H 0.075 0.925 29 H 0.400 0.600 30 H 0.165 0.835 31 H 0.126 0.874 32 H 0.375 0.625 33 H -0.247 1.247 34 H -0.253 1.253 35 H 0.156 0.844 36 H 0.177 0.823 37 H 0.199 0.801 38 H 0.082 0.918 39 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.220 -0.319 -2.171 2.510 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.004 3.996 4 H 0.110 0.890 5 C -0.208 4.208 6 C 0.024 3.976 7 H 0.138 0.862 8 N -0.367 5.367 9 C 0.392 3.608 10 O -0.428 6.428 11 C -0.330 4.330 12 C 0.049 3.951 13 C -0.109 4.109 14 C -0.072 4.072 15 C -0.184 4.184 16 O -0.327 6.327 17 Si 0.594 3.406 18 C -0.184 4.184 19 C -0.003 4.003 20 N -0.031 5.031 21 N -0.133 5.133 22 C -0.060 4.060 23 C -0.182 4.182 24 H 0.061 0.939 25 H 0.062 0.938 26 H 0.105 0.895 27 H 0.112 0.888 28 H 0.094 0.906 29 H 0.235 0.765 30 H 0.183 0.817 31 H 0.144 0.856 32 H 0.223 0.777 33 H -0.171 1.171 34 H -0.177 1.177 35 H 0.174 0.826 36 H 0.194 0.806 37 H 0.216 0.784 38 H 0.100 0.900 39 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 2.174 0.367 -1.810 2.853 hybrid contribution -0.430 -0.546 0.869 1.113 sum 1.745 -0.179 -0.941 1.990 Atomic orbital electron populations 1.22823 0.80807 1.03015 1.00127 1.87937 1.19959 1.26938 1.94566 1.23493 0.93754 0.85712 0.96598 0.88969 1.24060 0.97551 1.01455 0.97756 1.22149 0.80371 1.00465 0.94627 0.86206 1.45596 1.14640 1.14060 1.62374 1.16851 0.83546 0.83954 0.76415 1.90778 1.71164 1.23782 1.57078 1.19623 0.97844 0.94210 1.21366 1.19292 0.86384 0.93246 0.96194 1.20700 1.00589 0.90561 0.99085 1.20415 0.93117 0.97239 0.96411 1.25086 1.11748 0.94968 0.86631 1.86710 1.39578 1.86892 1.19568 0.94400 0.76520 0.79287 0.90352 1.20701 0.99375 0.93285 1.05009 1.21518 0.91777 0.92360 0.94617 1.46083 1.10138 1.09325 1.37550 1.77646 1.20734 0.91336 1.23608 1.24085 0.90136 0.98131 0.93685 1.23628 0.95634 1.00462 0.98520 0.93863 0.93826 0.89517 0.88790 0.90608 0.76547 0.81721 0.85574 0.77711 1.17133 1.17682 0.82609 0.80568 0.78434 0.89973 0.88517 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.56 10.72 -35.23 -0.38 -0.94 16 3 C 0.06 -0.02 4.32 -25.82 -0.11 -0.13 16 4 H 0.09 -0.14 7.87 -51.93 -0.41 -0.55 16 5 C -0.17 -0.01 7.72 -25.82 -0.20 -0.21 16 6 C 0.13 -0.01 4.24 -67.12 -0.28 -0.29 16 7 H 0.12 0.12 7.46 -51.93 -0.39 -0.27 16 8 N -0.72 -0.02 5.35 -54.35 -0.29 -0.31 16 9 C 0.60 1.79 7.78 -12.90 -0.10 1.69 16 10 O -0.55 -3.27 15.31 5.17 0.08 -3.19 16 11 C -0.32 -0.76 6.17 -104.68 -0.65 -1.41 16 12 C 0.17 0.46 6.76 -84.07 -0.57 -0.11 16 13 C -0.09 -0.12 9.35 -39.53 -0.37 -0.49 16 14 C -0.07 0.05 4.53 -104.55 -0.47 -0.43 16 15 C -0.08 0.10 2.84 36.01 0.10 0.21 16 16 O -0.52 0.03 12.88 -35.23 -0.45 -0.43 16 17 Si 0.70 -1.59 31.97 -169.99 -5.43 -7.03 16 18 C -0.16 0.34 8.38 -39.95 -0.33 0.00 16 19 C 0.12 -0.12 11.18 -16.68 -0.19 -0.30 16 20 N -0.27 -0.53 3.86 -10.55 -0.04 -0.57 16 21 N -0.31 -0.82 12.57 30.75 0.39 -0.43 16 22 C 0.12 0.09 11.44 -17.14 -0.20 -0.11 16 23 C -0.14 0.17 7.66 -25.92 -0.20 -0.03 16 24 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 25 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.09 0.05 8.14 -51.93 -0.42 -0.37 16 28 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 29 H 0.40 -1.01 7.65 -40.82 -0.31 -1.33 16 30 H 0.17 0.27 7.01 -52.49 -0.37 -0.10 16 31 H 0.13 -0.22 7.71 -51.93 -0.40 -0.62 16 32 H 0.38 -1.37 8.08 45.56 0.37 -1.00 16 33 H -0.25 -0.24 7.11 56.52 0.40 0.17 16 34 H -0.25 0.31 7.05 56.52 0.40 0.71 16 35 H 0.16 -0.76 7.26 -52.49 -0.38 -1.14 16 36 H 0.18 -0.65 8.06 -52.49 -0.42 -1.07 16 37 H 0.20 -0.68 7.46 -52.48 -0.39 -1.07 16 38 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.10 -0.14 8.12 -51.93 -0.42 -0.56 16 LS Contribution 335.54 15.07 5.06 5.06 Total: 0.00 -9.67 335.54 -8.41 -18.08 By element: Atomic # 1 Polarization: -4.83 SS G_CDS: -4.86 Total: -9.69 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: -2.47 Total: -0.54 kcal Atomic # 7 Polarization: -1.37 SS G_CDS: 0.06 Total: -1.32 kcal Atomic # 8 Polarization: -3.81 SS G_CDS: -0.75 Total: -4.56 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.43 Total: -7.03 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -9.67 -8.41 -18.08 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_11618758.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.050 kcal (2) G-P(sol) polarization free energy of solvation -9.675 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.407 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.082 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.968 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds