Wall clock time and date at job start Mon Mar 8 2021 04:08:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42898 * 113.99793 * 2 1 4 4 H 1.09002 * 112.85220 * 18.80210 * 3 2 1 5 5 C 1.53782 * 113.61391 * 150.00163 * 3 2 1 6 6 C 1.53778 * 87.08316 * 139.97999 * 5 3 2 7 7 H 1.08993 * 113.61964 * 89.19633 * 6 5 3 8 8 N 1.46506 * 113.61353 * 220.01767 * 6 5 3 9 9 C 1.34773 * 120.00081 * 203.46536 * 8 6 5 10 10 O 1.21700 * 119.99841 * 0.02562 * 9 8 6 11 11 C 1.46673 * 120.00263 * 180.02562 * 9 8 6 12 12 C 1.37871 * 126.23368 * 180.02562 * 11 9 8 13 13 C 1.50695 * 126.46076 * 359.97438 * 12 11 9 14 14 C 1.39841 * 107.08536 * 179.97438 * 12 11 9 15 15 C 1.50692 * 126.07100 * 179.97438 * 14 12 11 16 16 O 1.42898 * 109.47127 * 337.04211 * 15 14 12 17 17 Si 1.86298 * 109.47348 * 217.04350 * 15 14 12 18 18 C 1.35452 * 107.86117 * 0.22615 * 14 12 11 19 19 C 1.50707 * 125.56238 * 179.76682 * 18 14 12 20 20 N 1.35537 * 108.87501 * 359.62644 * 18 14 12 21 21 C 1.53784 * 87.17105 * 334.60688 * 6 5 3 22 22 H 1.09000 * 109.46897 * 179.97438 * 1 2 3 23 23 H 1.08996 * 109.47326 * 300.00006 * 1 2 3 24 24 H 1.08998 * 109.46871 * 60.00720 * 1 2 3 25 25 H 1.08995 * 113.62035 * 25.42691 * 5 3 2 26 26 H 1.09000 * 113.61076 * 254.52487 * 5 3 2 27 27 H 0.97004 * 119.99932 * 23.47110 * 8 6 5 28 28 H 1.08993 * 109.47428 * 270.00573 * 13 12 11 29 29 H 1.09005 * 109.46819 * 30.00301 * 13 12 11 30 30 H 1.08996 * 109.47409 * 149.99996 * 13 12 11 31 31 H 1.09003 * 109.47109 * 97.04131 * 15 14 12 32 32 H 0.96704 * 114.00395 * 300.00247 * 16 15 14 33 33 H 1.48497 * 109.99952 * 58.67826 * 17 15 14 34 34 H 1.48500 * 110.00405 * 179.97438 * 17 15 14 35 35 H 1.09002 * 109.46648 * 84.06734 * 19 18 14 36 36 H 1.09002 * 109.47142 * 204.05825 * 19 18 14 37 37 H 1.08996 * 109.47211 * 324.07007 * 19 18 14 38 38 H 0.97001 * 125.67928 * 180.10703 * 20 18 14 39 39 H 1.09001 * 113.61346 * 139.94055 * 21 6 5 40 40 H 1.08999 * 113.61623 * 270.84068 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 0.3237 5 6 3.3755 1.3719 0.7045 6 6 3.8227 2.3182 -0.4222 7 1 3.6235 3.3694 -0.2144 8 7 5.1935 2.0786 -0.8803 9 6 5.8842 3.0656 -1.4846 10 8 5.3694 4.1559 -1.6494 11 6 7.2564 2.8256 -1.9438 12 6 8.0764 3.7379 -2.5732 13 6 7.7313 5.1638 -2.9177 14 6 9.2887 3.0907 -2.8318 15 6 10.4911 3.6964 -3.5089 16 8 10.0780 4.8039 -4.3118 17 14 11.3060 2.4160 -4.5894 18 6 9.1885 1.8211 -2.3707 19 6 10.2678 0.7722 -2.4494 20 7 7.9603 1.6488 -1.8241 21 6 2.7533 1.6510 -1.3033 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3634 0.5138 0.8899 24 1 -0.3633 0.5137 -0.8900 25 1 3.9088 0.4214 0.7138 26 1 3.3383 1.8472 1.6847 27 1 5.6040 1.2096 -0.7487 28 1 7.2893 5.2003 -3.9133 29 1 7.0188 5.5512 -2.1895 30 1 8.6361 5.7712 -2.8994 31 1 11.1990 4.0387 -2.7542 32 1 9.4459 4.5725 -5.0061 33 1 10.3413 1.9180 -5.6025 34 1 12.4929 3.0010 -5.2633 35 1 10.9513 0.8905 -1.6085 36 1 9.8150 -0.2186 -2.4128 37 1 10.8179 0.8862 -3.3834 38 1 7.6306 0.8310 -1.4197 39 1 2.2145 2.3513 -1.9417 40 1 3.1162 0.7769 -1.8440 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_12297754.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:31 Heat of formation + Delta-G solvation = -41.296738 kcal Electronic energy + Delta-G solvation = -22317.411796 eV Core-core repulsion = 18907.546642 eV Total energy + Delta-G solvation = -3409.865154 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -42.67798 -41.03765 -39.52949 -37.80730 -37.29565 -34.42794 -33.64831 -32.88761 -29.34431 -28.15864 -27.42620 -26.86598 -26.39618 -24.69731 -22.36029 -21.33321 -20.74692 -20.22331 -19.25428 -18.29002 -17.54010 -16.94680 -16.69841 -16.58958 -16.27695 -16.16665 -15.74255 -15.47042 -15.17047 -15.00139 -14.58498 -14.32514 -14.22544 -13.91000 -13.61325 -13.56042 -13.45364 -13.23766 -13.16345 -12.87259 -12.46575 -12.30579 -12.25820 -12.22219 -11.94700 -11.77277 -11.01545 -10.57071 -10.51069 -10.15923 -9.44254 -8.99978 -4.75896 0.40745 1.22329 1.66270 1.71034 1.91708 2.00894 2.12162 2.37936 2.82552 3.31633 3.43972 3.45097 3.62990 3.69993 3.74384 3.82207 3.94922 4.00076 4.20848 4.29689 4.37438 4.39196 4.42637 4.59084 4.59763 4.63833 4.68861 4.69729 4.73463 4.81403 4.87781 4.93849 4.97401 5.11923 5.34328 5.40719 5.49767 5.72987 5.94639 6.14362 6.27293 6.44879 6.58957 7.16182 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.094 0.906 5 C -0.144 4.144 6 C 0.127 3.873 7 H 0.121 0.879 8 N -0.721 5.721 9 C 0.593 3.407 10 O -0.522 6.522 11 C -0.066 4.066 12 C -0.043 4.043 13 C -0.094 4.094 14 C -0.207 4.207 15 C -0.030 4.030 16 O -0.529 6.529 17 Si 0.639 3.361 18 C 0.063 3.937 19 C -0.085 4.085 20 N -0.534 5.534 21 C -0.168 4.168 22 H 0.087 0.913 23 H 0.044 0.956 24 H 0.043 0.957 25 H 0.095 0.905 26 H 0.083 0.917 27 H 0.395 0.605 28 H 0.064 0.936 29 H 0.076 0.924 30 H 0.078 0.922 31 H 0.114 0.886 32 H 0.374 0.626 33 H -0.261 1.261 34 H -0.253 1.253 35 H 0.096 0.904 36 H 0.082 0.918 37 H 0.088 0.912 38 H 0.416 0.584 39 H 0.077 0.923 40 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.189 -6.109 2.827 6.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.006 3.994 4 H 0.112 0.888 5 C -0.182 4.182 6 C 0.022 3.978 7 H 0.139 0.861 8 N -0.372 5.372 9 C 0.381 3.619 10 O -0.398 6.398 11 C -0.177 4.177 12 C -0.052 4.052 13 C -0.151 4.151 14 C -0.214 4.214 15 C -0.141 4.141 16 O -0.335 6.335 17 Si 0.540 3.460 18 C -0.055 4.055 19 C -0.140 4.140 20 N -0.132 5.132 21 C -0.208 4.208 22 H 0.106 0.894 23 H 0.063 0.937 24 H 0.062 0.938 25 H 0.114 0.886 26 H 0.102 0.898 27 H 0.229 0.771 28 H 0.083 0.917 29 H 0.095 0.905 30 H 0.097 0.903 31 H 0.131 0.869 32 H 0.222 0.778 33 H -0.185 1.185 34 H -0.178 1.178 35 H 0.115 0.885 36 H 0.100 0.900 37 H 0.105 0.895 38 H 0.254 0.746 39 H 0.096 0.904 40 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 0.440 -5.489 2.384 6.001 hybrid contribution -1.175 -0.098 -0.309 1.219 sum -0.735 -5.587 2.076 6.005 Atomic orbital electron populations 1.22835 0.80667 1.03091 1.00202 1.87932 1.20087 1.26852 1.94557 1.23484 0.93726 0.85836 0.96399 0.88843 1.23619 0.95774 1.00270 0.98538 1.22214 0.80108 1.00651 0.94820 0.86097 1.45786 1.15224 1.14774 1.61412 1.17040 0.83413 0.84238 0.77193 1.90841 1.69039 1.23677 1.56201 1.20097 0.94354 0.88047 1.15204 1.19790 0.91686 0.95889 0.97811 1.20455 1.02437 0.90454 1.01731 1.19609 0.97845 0.93749 1.10225 1.24188 0.96644 0.95398 0.97877 1.86550 1.65538 1.33105 1.48261 0.95440 0.81987 0.84792 0.83797 1.20141 0.87200 0.96369 1.01824 1.20543 0.95251 0.95997 1.02254 1.41750 1.12009 1.12166 1.47258 1.24051 0.97482 1.01403 0.97815 0.89445 0.93748 0.93815 0.88610 0.89821 0.77124 0.91714 0.90528 0.90318 0.86879 0.77833 1.18528 1.17804 0.88545 0.89963 0.89493 0.74638 0.90426 0.88854 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.40 10.72 -35.23 -0.38 -0.78 16 3 C 0.06 -0.04 4.31 -25.83 -0.11 -0.15 16 4 H 0.09 -0.17 7.87 -51.93 -0.41 -0.58 16 5 C -0.14 0.23 7.66 -25.92 -0.20 0.03 16 6 C 0.13 -0.05 4.21 -67.11 -0.28 -0.34 16 7 H 0.12 0.09 7.50 -51.93 -0.39 -0.30 16 8 N -0.72 0.36 5.36 -54.32 -0.29 0.07 16 9 C 0.59 1.62 7.79 -12.86 -0.10 1.52 16 10 O -0.52 -3.23 14.42 5.19 0.07 -3.15 16 11 C -0.07 -0.12 7.06 -81.98 -0.58 -0.70 16 12 C -0.04 -0.13 6.16 -104.16 -0.64 -0.77 16 13 C -0.09 -0.32 8.61 36.00 0.31 -0.01 16 14 C -0.21 -0.24 5.31 -105.02 -0.56 -0.80 16 15 C -0.03 -0.02 3.05 36.00 0.11 0.09 16 16 O -0.53 -1.17 10.27 -35.23 -0.36 -1.53 16 17 Si 0.64 -0.25 27.78 -169.99 -4.72 -4.97 16 18 C 0.06 -0.08 6.81 -81.95 -0.56 -0.63 16 19 C -0.09 0.42 9.45 36.01 0.34 0.76 16 20 N -0.53 0.82 5.99 -5.69 -0.03 0.79 16 21 C -0.17 0.05 7.73 -25.83 -0.20 -0.15 16 22 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 23 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 24 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 25 H 0.10 -0.19 8.11 -51.93 -0.42 -0.61 16 26 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 27 H 0.39 -1.28 7.84 -40.82 -0.32 -1.60 16 28 H 0.06 0.19 8.14 -51.93 -0.42 -0.24 16 29 H 0.08 0.37 6.48 -51.93 -0.34 0.04 16 30 H 0.08 0.26 6.77 -51.93 -0.35 -0.09 16 31 H 0.11 0.00 7.96 -51.93 -0.41 -0.41 16 32 H 0.37 0.05 8.56 45.56 0.39 0.44 16 33 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 34 H -0.25 -0.75 7.11 56.52 0.40 -0.35 16 35 H 0.10 -0.61 8.14 -51.93 -0.42 -1.04 16 36 H 0.08 -0.53 8.14 -51.93 -0.42 -0.96 16 37 H 0.09 -0.43 2.76 -51.93 -0.14 -0.58 16 38 H 0.42 -2.03 8.19 -40.82 -0.33 -2.36 16 39 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 40 H 0.09 0.01 8.14 -51.93 -0.42 -0.41 16 LS Contribution 323.06 15.07 4.87 4.87 Total: 0.00 -8.72 323.06 -7.95 -16.67 By element: Atomic # 1 Polarization: -6.15 SS G_CDS: -5.73 Total: -11.88 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: -1.37 Total: -0.08 kcal Atomic # 7 Polarization: 1.18 SS G_CDS: -0.33 Total: 0.86 kcal Atomic # 8 Polarization: -4.80 SS G_CDS: -0.66 Total: -5.46 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: -4.72 Total: -4.97 kcal Total LS contribution 4.87 Total: 4.87 kcal Total: -8.72 -7.95 -16.67 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12297754.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.631 kcal (2) G-P(sol) polarization free energy of solvation -8.720 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.351 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.946 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.666 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.297 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds