Wall clock time and date at job start Mon Mar 8 2021 04:08:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42898 * 113.99793 * 2 1 4 4 H 1.09002 * 112.85220 * 18.80210 * 3 2 1 5 5 C 1.53782 * 113.61391 * 150.00163 * 3 2 1 6 6 C 1.53778 * 87.08316 * 139.97999 * 5 3 2 7 7 H 1.08993 * 113.61964 * 89.19633 * 6 5 3 8 8 N 1.46506 * 113.61353 * 220.01767 * 6 5 3 9 9 C 1.34773 * 120.00081 * 203.46536 * 8 6 5 10 10 O 1.21700 * 119.99841 * 0.02562 * 9 8 6 11 11 C 1.46673 * 120.00263 * 180.02562 * 9 8 6 12 12 C 1.37871 * 126.23368 * 180.02562 * 11 9 8 13 13 C 1.50695 * 126.46076 * 359.97438 * 12 11 9 14 14 C 1.39841 * 107.08536 * 179.97438 * 12 11 9 15 15 C 1.50692 * 126.07100 * 179.97438 * 14 12 11 16 16 O 1.42898 * 109.47127 * 337.04211 * 15 14 12 17 17 Si 1.86298 * 109.47348 * 217.04350 * 15 14 12 18 18 C 1.35452 * 107.86117 * 0.22615 * 14 12 11 19 19 C 1.50707 * 125.56238 * 179.76682 * 18 14 12 20 20 N 1.35537 * 108.87501 * 359.62644 * 18 14 12 21 21 C 1.53784 * 87.17105 * 334.60688 * 6 5 3 22 22 H 1.09000 * 109.46897 * 179.97438 * 1 2 3 23 23 H 1.08996 * 109.47326 * 300.00006 * 1 2 3 24 24 H 1.08998 * 109.46871 * 60.00720 * 1 2 3 25 25 H 1.08995 * 113.62035 * 25.42691 * 5 3 2 26 26 H 1.09000 * 113.61076 * 254.52487 * 5 3 2 27 27 H 0.97004 * 119.99932 * 23.47110 * 8 6 5 28 28 H 1.08993 * 109.47428 * 270.00573 * 13 12 11 29 29 H 1.09005 * 109.46819 * 30.00301 * 13 12 11 30 30 H 1.08996 * 109.47409 * 149.99996 * 13 12 11 31 31 H 1.09003 * 109.47109 * 97.04131 * 15 14 12 32 32 H 0.96704 * 114.00395 * 300.00247 * 16 15 14 33 33 H 1.48497 * 109.99952 * 58.67826 * 17 15 14 34 34 H 1.48500 * 110.00405 * 179.97438 * 17 15 14 35 35 H 1.09002 * 109.46648 * 84.06734 * 19 18 14 36 36 H 1.09002 * 109.47142 * 204.05825 * 19 18 14 37 37 H 1.08996 * 109.47211 * 324.07007 * 19 18 14 38 38 H 0.97001 * 125.67928 * 180.10703 * 20 18 14 39 39 H 1.09001 * 113.61346 * 139.94055 * 21 6 5 40 40 H 1.08999 * 113.61623 * 270.84068 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 0.3237 5 6 3.3755 1.3719 0.7045 6 6 3.8227 2.3182 -0.4222 7 1 3.6235 3.3694 -0.2144 8 7 5.1935 2.0786 -0.8803 9 6 5.8842 3.0656 -1.4846 10 8 5.3694 4.1559 -1.6494 11 6 7.2564 2.8256 -1.9438 12 6 8.0764 3.7379 -2.5732 13 6 7.7313 5.1638 -2.9177 14 6 9.2887 3.0907 -2.8318 15 6 10.4911 3.6964 -3.5089 16 8 10.0780 4.8039 -4.3118 17 14 11.3060 2.4160 -4.5894 18 6 9.1885 1.8211 -2.3707 19 6 10.2678 0.7722 -2.4494 20 7 7.9603 1.6488 -1.8241 21 6 2.7533 1.6510 -1.3033 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3634 0.5138 0.8899 24 1 -0.3633 0.5137 -0.8900 25 1 3.9088 0.4214 0.7138 26 1 3.3383 1.8472 1.6847 27 1 5.6040 1.2096 -0.7487 28 1 7.2893 5.2003 -3.9133 29 1 7.0188 5.5512 -2.1895 30 1 8.6361 5.7712 -2.8994 31 1 11.1990 4.0387 -2.7542 32 1 9.4459 4.5725 -5.0061 33 1 10.3413 1.9180 -5.6025 34 1 12.4929 3.0010 -5.2633 35 1 10.9513 0.8905 -1.6085 36 1 9.8150 -0.2186 -2.4128 37 1 10.8179 0.8862 -3.3834 38 1 7.6306 0.8310 -1.4197 39 1 2.2145 2.3513 -1.9417 40 1 3.1162 0.7769 -1.8440 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_12297754.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:30 Heat of formation + Delta-G solvation = -44.071451 kcal Electronic energy + Delta-G solvation = -22317.532117 eV Core-core repulsion = 18907.546642 eV Total energy + Delta-G solvation = -3409.985475 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.69795 -41.05924 -39.63516 -37.90752 -37.31936 -34.51613 -33.66460 -32.85433 -29.31863 -28.13303 -27.42696 -26.80909 -26.45330 -24.66870 -22.41761 -21.33410 -20.76317 -20.28219 -19.27098 -18.28901 -17.63031 -16.90899 -16.76240 -16.62251 -16.29034 -16.13907 -15.82406 -15.48542 -15.16913 -14.96245 -14.62836 -14.33864 -14.22466 -13.80167 -13.68045 -13.55268 -13.48319 -13.27009 -13.10186 -12.81392 -12.57022 -12.39595 -12.23319 -12.18227 -11.90083 -11.88375 -11.19806 -10.63410 -10.52230 -10.24169 -9.50824 -9.00267 -4.75210 0.32770 1.20650 1.63473 1.68413 1.89569 2.05734 2.10316 2.23015 2.89710 3.36491 3.41851 3.49086 3.73960 3.78862 3.81655 3.86967 3.95564 4.17893 4.28198 4.44780 4.48563 4.52038 4.61686 4.63484 4.66232 4.67128 4.79942 4.82060 4.83516 4.86344 4.89408 4.90855 4.97415 5.11197 5.21554 5.30277 5.39406 5.67935 5.81634 6.21108 6.35774 6.49737 6.57936 7.05223 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.395 6.395 3 C 0.062 3.938 4 H 0.103 0.897 5 C -0.131 4.131 6 C 0.124 3.876 7 H 0.106 0.894 8 N -0.705 5.705 9 C 0.589 3.411 10 O -0.567 6.567 11 C -0.081 4.081 12 C -0.072 4.072 13 C -0.085 4.085 14 C -0.231 4.231 15 C -0.045 4.045 16 O -0.549 6.549 17 Si 0.740 3.260 18 C 0.083 3.917 19 C -0.087 4.087 20 N -0.517 5.517 21 C -0.167 4.167 22 H 0.093 0.907 23 H 0.053 0.947 24 H 0.046 0.954 25 H 0.104 0.896 26 H 0.092 0.908 27 H 0.410 0.590 28 H 0.061 0.939 29 H 0.055 0.945 30 H 0.073 0.927 31 H 0.119 0.881 32 H 0.380 0.620 33 H -0.298 1.298 34 H -0.302 1.302 35 H 0.122 0.878 36 H 0.109 0.891 37 H 0.091 0.909 38 H 0.434 0.566 39 H 0.068 0.932 40 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.843 -8.442 3.847 9.316 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.314 6.314 3 C 0.003 3.997 4 H 0.121 0.879 5 C -0.169 4.169 6 C 0.019 3.981 7 H 0.124 0.876 8 N -0.356 5.356 9 C 0.378 3.622 10 O -0.446 6.446 11 C -0.193 4.193 12 C -0.081 4.081 13 C -0.142 4.142 14 C -0.237 4.237 15 C -0.154 4.154 16 O -0.356 6.356 17 Si 0.646 3.354 18 C -0.037 4.037 19 C -0.141 4.141 20 N -0.116 5.116 21 C -0.207 4.207 22 H 0.112 0.888 23 H 0.071 0.929 24 H 0.064 0.936 25 H 0.123 0.877 26 H 0.111 0.889 27 H 0.247 0.753 28 H 0.080 0.920 29 H 0.074 0.926 30 H 0.092 0.908 31 H 0.137 0.863 32 H 0.228 0.772 33 H -0.226 1.226 34 H -0.230 1.230 35 H 0.140 0.860 36 H 0.128 0.872 37 H 0.108 0.892 38 H 0.275 0.725 39 H 0.087 0.913 40 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 1.068 -7.878 3.457 8.669 hybrid contribution -1.389 0.622 -0.654 1.657 sum -0.321 -7.256 2.802 7.785 Atomic orbital electron populations 1.22961 0.79814 1.03750 1.00776 1.87895 1.21178 1.27669 1.94651 1.23576 0.94308 0.85649 0.96118 0.87915 1.23555 0.94936 1.00156 0.98272 1.22184 0.80009 1.00265 0.95657 0.87592 1.45644 1.15007 1.14826 1.60129 1.17235 0.83838 0.84074 0.77019 1.90814 1.70078 1.25532 1.58194 1.19906 0.94170 0.89268 1.16004 1.19930 0.93186 0.95815 0.99145 1.20288 1.01477 0.91483 1.00924 1.19708 0.97382 0.94915 1.11671 1.24522 0.96878 0.95598 0.98383 1.86515 1.65855 1.34453 1.48776 0.94406 0.77388 0.82587 0.81051 1.20700 0.87570 0.96259 0.99154 1.20795 0.94416 0.95936 1.02945 1.41697 1.11542 1.11849 1.46477 1.24023 0.97577 1.01034 0.98018 0.88816 0.92870 0.93568 0.87736 0.88911 0.75312 0.92046 0.92586 0.90775 0.86350 0.77205 1.22580 1.23027 0.85961 0.87203 0.89232 0.72495 0.91305 0.89067 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.40 -0.69 10.72 -148.98 -1.60 -2.29 16 3 C 0.06 -0.09 4.31 31.18 0.13 0.04 16 4 H 0.10 -0.38 7.87 -2.39 -0.02 -0.40 16 5 C -0.13 0.51 7.66 31.12 0.24 0.75 16 6 C 0.12 -0.04 4.21 45.52 0.19 0.15 16 7 H 0.11 0.33 7.50 -2.39 -0.02 0.32 16 8 N -0.71 0.57 5.36 -444.00 -2.38 -1.81 16 9 C 0.59 3.98 7.79 86.45 0.67 4.65 16 10 O -0.57 -8.52 14.42 -4.35 -0.06 -8.59 16 11 C -0.08 -0.35 7.06 40.35 0.28 -0.07 16 12 C -0.07 -0.53 6.16 -19.56 -0.12 -0.65 16 13 C -0.08 -0.82 8.61 71.23 0.61 -0.20 16 14 C -0.23 -0.55 5.31 -20.12 -0.11 -0.65 16 15 C -0.04 -0.08 3.05 71.23 0.22 0.14 16 16 O -0.55 -3.30 10.27 -148.98 -1.53 -4.83 16 17 Si 0.74 -0.72 27.78 68.60 1.91 1.19 16 18 C 0.08 -0.34 6.81 41.34 0.28 -0.06 16 19 C -0.09 1.13 9.45 71.24 0.67 1.81 16 20 N -0.52 2.29 5.99 -171.93 -1.03 1.25 16 21 C -0.17 0.01 7.73 31.18 0.24 0.25 16 22 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 23 H 0.05 -0.23 8.14 -2.39 -0.02 -0.25 16 24 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 25 H 0.10 -0.57 8.11 -2.39 -0.02 -0.59 16 26 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 27 H 0.41 -3.06 7.84 -92.71 -0.73 -3.79 16 28 H 0.06 0.55 8.14 -2.39 -0.02 0.53 16 29 H 0.06 0.75 6.48 -2.38 -0.02 0.74 16 30 H 0.07 0.71 6.77 -2.39 -0.02 0.69 16 31 H 0.12 0.01 7.96 -2.39 -0.02 -0.01 16 32 H 0.38 0.85 8.56 -74.05 -0.63 0.22 16 33 H -0.30 -1.53 7.11 99.48 0.71 -0.82 16 34 H -0.30 -2.12 7.11 99.48 0.71 -1.41 16 35 H 0.12 -2.08 8.14 -2.39 -0.02 -2.10 16 36 H 0.11 -1.93 8.14 -2.39 -0.02 -1.95 16 37 H 0.09 -1.14 2.76 -2.39 -0.01 -1.15 16 38 H 0.43 -5.25 8.19 -92.71 -0.76 -6.01 16 39 H 0.07 0.11 8.14 -2.39 -0.02 0.09 16 40 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 Total: 0.00 -23.55 323.06 -1.14 -24.69 By element: Atomic # 1 Polarization: -15.95 SS G_CDS: -0.99 Total: -16.94 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: 4.55 Total: 7.33 kcal Atomic # 7 Polarization: 2.85 SS G_CDS: -3.41 Total: -0.56 kcal Atomic # 8 Polarization: -12.51 SS G_CDS: -3.19 Total: -15.70 kcal Atomic # 14 Polarization: -0.72 SS G_CDS: 1.91 Total: 1.19 kcal Total: -23.55 -1.14 -24.69 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12297754.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.384 kcal (2) G-P(sol) polarization free energy of solvation -23.552 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.935 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.136 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.688 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.071 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds