Wall clock time and date at job start Mon Mar 8 2021 04:08:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35657 * 116.99736 * 2 1 4 4 C 1.38397 * 120.12288 * 0.02815 * 3 2 1 5 5 C 1.38729 * 120.03651 * 179.97438 * 4 3 2 6 6 O 1.35711 * 119.86929 * 180.02562 * 5 4 3 7 7 C 1.42905 * 116.99522 * 0.02562 * 6 5 4 8 8 C 1.39141 * 120.27044 * 0.04103 * 5 4 3 9 9 C 1.50697 * 119.88398 * 179.97438 * 8 5 4 10 10 O 1.42898 * 109.46989 * 74.99777 * 9 8 5 11 11 Si 1.86294 * 109.47400 * 195.00176 * 9 8 5 12 12 C 1.37595 * 120.23979 * 359.67968 * 8 5 4 13 13 C 1.39820 * 119.95947 * 0.57301 * 12 8 5 14 14 C 1.47306 * 120.13018 * 179.72050 * 13 12 8 15 15 O 1.21613 * 119.99769 * 179.72428 * 14 13 12 16 16 N 1.34772 * 120.00233 * 359.72976 * 14 13 12 17 17 C 1.46501 * 120.00042 * 179.97438 * 16 14 13 18 18 H 1.09000 * 112.90742 * 23.74973 * 17 16 14 19 19 C 1.53787 * 113.61128 * 154.99929 * 17 16 14 20 20 C 1.53784 * 87.07923 * 139.98386 * 19 17 16 21 21 H 1.09002 * 113.61478 * 89.11632 * 20 19 17 22 22 O 1.42894 * 113.61434 * 220.01675 * 20 19 17 23 23 C 1.42903 * 114.00393 * 209.99830 * 22 20 19 24 24 C 1.53779 * 87.08045 * 334.56667 * 20 19 17 25 25 H 1.09001 * 109.46980 * 179.97438 * 1 2 3 26 26 H 1.08999 * 109.47025 * 299.99535 * 1 2 3 27 27 H 1.09001 * 109.47057 * 59.99657 * 1 2 3 28 28 H 1.08002 * 119.98613 * 359.97242 * 4 3 2 29 29 H 1.08997 * 109.46918 * 180.02562 * 7 6 5 30 30 H 1.09003 * 109.47095 * 299.99725 * 7 6 5 31 31 H 1.08993 * 109.47360 * 59.99894 * 7 6 5 32 32 H 1.09001 * 109.47116 * 315.00305 * 9 8 5 33 33 H 0.96710 * 113.99882 * 60.00704 * 10 9 8 34 34 H 1.48505 * 109.99971 * 180.02562 * 11 9 8 35 35 H 1.48494 * 110.00244 * 301.31894 * 11 9 8 36 36 H 1.07998 * 120.01969 * 180.29873 * 12 8 5 37 37 H 0.97005 * 119.99829 * 359.97438 * 16 14 13 38 38 H 1.09004 * 113.61202 * 254.53139 * 19 17 16 39 39 H 1.08994 * 113.61447 * 25.43570 * 19 17 16 40 40 H 1.08994 * 109.46959 * 300.00297 * 23 22 20 41 41 H 1.09007 * 109.46503 * 60.00032 * 23 22 20 42 42 H 1.08995 * 109.47463 * 179.97438 * 23 22 20 43 43 H 1.09006 * 113.61307 * 270.88660 * 24 20 19 44 44 H 1.08999 * 113.69146 * 139.99146 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2935 2.3710 0.0006 5 6 1.9252 3.6062 0.0011 6 8 1.1851 4.7437 0.0022 7 6 -0.2360 4.5931 0.0033 8 6 3.3144 3.6835 0.0002 9 6 3.9915 5.0298 0.0002 10 8 3.8948 5.6116 1.3018 11 14 5.7858 4.8227 -0.4557 12 6 4.0724 2.5352 0.0054 13 6 3.4461 1.2851 -0.0005 14 6 4.2539 0.0533 -0.0011 15 8 3.7066 -1.0327 -0.0012 16 7 5.5995 0.1299 -0.0016 17 6 6.4028 -1.0952 -0.0017 18 1 5.8669 -1.9540 -0.4058 19 6 7.8084 -0.9101 -0.5977 20 6 8.3201 -1.8259 0.5267 21 1 8.3083 -2.8845 0.2671 22 8 9.5656 -1.4043 1.0861 23 6 10.3718 -2.4746 1.5827 24 6 7.0955 -1.3778 1.3419 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8900 28 1 0.2149 2.3165 0.0006 29 1 -0.7056 5.5767 0.0037 30 1 -0.5439 4.0442 -0.8867 31 1 -0.5424 4.0435 0.8933 32 1 3.5050 5.6812 -0.7259 33 1 4.3076 5.0847 1.9998 34 1 6.4649 6.1433 -0.4586 35 1 6.4529 3.9113 0.5084 36 1 5.1505 2.5994 0.0096 37 1 6.0360 0.9961 -0.0018 38 1 7.9199 -1.3378 -1.5941 39 1 8.1797 0.1125 -0.5309 40 1 9.8300 -3.0042 2.3664 41 1 10.6011 -3.1640 0.7700 42 1 11.2993 -2.0722 1.9899 43 1 7.2720 -0.4830 1.9388 44 1 6.6307 -2.1822 1.9120 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_12297780.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:33 Heat of formation + Delta-G solvation = -117.311434 kcal Electronic energy + Delta-G solvation = -28254.357985 eV Core-core repulsion = 24141.031973 eV Total energy + Delta-G solvation = -4113.326012 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.12611 -41.04231 -40.16163 -39.51583 -38.51661 -37.23875 -37.05606 -34.24640 -32.26604 -31.62269 -28.98577 -28.26180 -27.72975 -26.73981 -26.17232 -25.50090 -24.04361 -22.67560 -21.59879 -21.02575 -20.02059 -18.85616 -18.34411 -18.01977 -17.86467 -17.22226 -16.92064 -16.69663 -16.60722 -16.33473 -16.17550 -16.05612 -15.83469 -15.71956 -15.53211 -15.30265 -14.95130 -14.58720 -14.22411 -13.97239 -13.66668 -13.45907 -13.35272 -13.22237 -12.73254 -12.68870 -12.53849 -12.52388 -12.25763 -12.11247 -12.10534 -11.84852 -11.78714 -11.67591 -10.90711 -10.55231 -10.46380 -10.09922 -9.92301 -9.20097 -4.91416 -0.26879 0.07269 1.30702 1.55416 1.71150 1.97354 2.06106 2.12032 2.17737 2.58558 2.95019 3.42807 3.44234 3.47204 3.56815 3.61375 3.74390 3.79278 3.84247 3.91058 4.11110 4.16783 4.23422 4.27539 4.28157 4.30324 4.33574 4.51771 4.55609 4.57157 4.63952 4.67728 4.73919 4.74608 4.75638 4.86416 4.89654 4.97521 4.98700 5.01989 5.08678 5.29409 5.51332 6.03429 6.26671 6.28980 6.51632 6.55057 7.22169 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.304 6.304 3 C 0.219 3.781 4 C -0.310 4.310 5 C 0.216 3.784 6 O -0.312 6.312 7 C 0.012 3.988 8 C -0.197 4.197 9 C -0.070 4.070 10 O -0.546 6.546 11 Si 0.760 3.240 12 C 0.000 4.000 13 C -0.227 4.227 14 C 0.565 3.435 15 O -0.563 6.563 16 N -0.708 5.708 17 C 0.124 3.876 18 H 0.108 0.892 19 C -0.133 4.133 20 C 0.062 3.938 21 H 0.104 0.896 22 O -0.396 6.396 23 C 0.023 3.977 24 C -0.170 4.170 25 H 0.113 0.887 26 H 0.069 0.931 27 H 0.073 0.927 28 H 0.164 0.836 29 H 0.119 0.881 30 H 0.072 0.928 31 H 0.066 0.934 32 H 0.115 0.885 33 H 0.383 0.617 34 H -0.299 1.299 35 H -0.258 1.258 36 H 0.160 0.840 37 H 0.410 0.590 38 H 0.095 0.905 39 H 0.103 0.897 40 H 0.045 0.955 41 H 0.053 0.947 42 H 0.092 0.908 43 H 0.089 0.911 44 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.642 0.288 -2.261 2.368 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.215 6.215 3 C 0.169 3.831 4 C -0.330 4.330 5 C 0.168 3.832 6 O -0.223 6.223 7 C -0.082 4.082 8 C -0.199 4.199 9 C -0.178 4.178 10 O -0.354 6.354 11 Si 0.663 3.337 12 C -0.019 4.019 13 C -0.232 4.232 14 C 0.354 3.646 15 O -0.443 6.443 16 N -0.360 5.360 17 C 0.019 3.981 18 H 0.126 0.874 19 C -0.171 4.171 20 C 0.004 3.996 21 H 0.122 0.878 22 O -0.315 6.315 23 C -0.073 4.073 24 C -0.209 4.209 25 H 0.131 0.869 26 H 0.088 0.912 27 H 0.092 0.908 28 H 0.181 0.819 29 H 0.137 0.863 30 H 0.091 0.909 31 H 0.085 0.915 32 H 0.133 0.867 33 H 0.232 0.768 34 H -0.227 1.227 35 H -0.183 1.183 36 H 0.177 0.823 37 H 0.248 0.752 38 H 0.114 0.886 39 H 0.122 0.878 40 H 0.064 0.936 41 H 0.072 0.928 42 H 0.111 0.889 43 H 0.107 0.893 44 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -0.358 0.260 -2.335 2.376 hybrid contribution -0.835 0.028 1.418 1.646 sum -1.193 0.288 -0.916 1.531 Atomic orbital electron populations 1.23478 0.76498 1.05778 1.02664 1.86365 1.23225 1.25882 1.86009 1.18968 0.91046 0.84725 0.88313 1.21418 1.02018 0.90719 1.18804 1.18919 0.90902 0.84910 0.88503 1.86147 1.21066 1.28656 1.86448 1.23469 0.76267 1.05852 1.02632 1.19484 0.90836 0.96496 1.13045 1.25074 1.12395 0.92472 0.87853 1.86616 1.80686 1.50806 1.17262 0.94306 0.71263 0.79335 0.88775 1.20997 1.00197 0.89013 0.91652 1.19131 0.90835 0.93758 1.19433 1.18084 0.82507 0.88426 0.75558 1.90807 1.72306 1.30224 1.50945 1.45728 1.05121 1.10012 1.75179 1.22170 0.90341 0.88480 0.97103 0.87402 1.23588 0.92379 1.02154 0.99012 1.23556 0.82633 0.99082 0.94378 0.87793 1.87901 1.30670 1.33988 1.78923 1.22953 0.95290 0.90471 0.98559 1.24011 0.96539 1.02565 0.97775 0.86872 0.91194 0.90843 0.81909 0.86310 0.90915 0.91528 0.86716 0.76767 1.22727 1.18338 0.82275 0.75248 0.88612 0.87817 0.93592 0.92826 0.88948 0.89266 0.91280 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.30 -2.54 8.56 -68.77 -0.59 -3.13 16 3 C 0.22 1.36 6.69 22.82 0.15 1.51 16 4 C -0.31 -0.54 8.01 22.43 0.18 -0.36 16 5 C 0.22 0.56 6.67 22.60 0.15 0.71 16 6 O -0.31 -0.72 9.80 -90.32 -0.89 -1.60 16 7 C 0.01 -0.06 9.80 113.37 1.11 1.05 16 8 C -0.20 -0.22 5.27 -19.80 -0.10 -0.32 16 9 C -0.07 -0.02 2.37 71.23 0.17 0.15 16 10 O -0.55 -1.94 12.88 -148.98 -1.92 -3.85 16 11 Si 0.76 -2.61 30.25 68.60 2.08 -0.54 16 12 C 0.00 0.00 8.14 22.50 0.18 0.18 16 13 C -0.23 -1.24 5.89 -20.00 -0.12 -1.35 16 14 C 0.56 4.73 7.76 86.63 0.67 5.40 16 15 O -0.56 -9.29 14.75 16.89 0.25 -9.04 16 16 N -0.71 -1.18 5.30 -443.42 -2.35 -3.53 16 17 C 0.12 0.15 4.24 45.52 0.19 0.34 16 18 H 0.11 0.45 7.46 -2.39 -0.02 0.43 16 19 C -0.13 0.34 7.66 31.12 0.24 0.58 16 20 C 0.06 -0.02 4.31 31.12 0.13 0.11 16 21 H 0.10 -0.31 7.87 -2.39 -0.02 -0.33 16 22 O -0.40 -1.17 10.71 -148.98 -1.60 -2.76 16 23 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 24 C -0.17 -0.23 7.71 31.12 0.24 0.01 16 25 H 0.11 -0.36 8.14 -2.39 -0.02 -0.38 16 26 H 0.07 -0.30 7.66 -2.39 -0.02 -0.32 16 27 H 0.07 -0.35 7.66 -2.39 -0.02 -0.37 16 28 H 0.16 -0.54 4.50 -2.91 -0.01 -0.55 16 29 H 0.12 -0.91 8.14 -2.39 -0.02 -0.93 16 30 H 0.07 -0.55 7.65 -2.39 -0.02 -0.57 16 31 H 0.07 -0.43 7.65 -2.39 -0.02 -0.45 16 32 H 0.11 0.08 7.82 -2.39 -0.02 0.06 16 33 H 0.38 -1.02 8.70 -74.05 -0.64 -1.66 16 34 H -0.30 -1.38 7.11 99.48 0.71 -0.67 16 35 H -0.26 0.84 6.67 99.48 0.66 1.50 16 36 H 0.16 -0.84 3.17 -2.91 -0.01 -0.85 16 37 H 0.41 -1.57 6.75 -92.70 -0.63 -2.19 16 38 H 0.10 -0.44 8.14 -2.39 -0.02 -0.46 16 39 H 0.10 -0.39 8.12 -2.39 -0.02 -0.41 16 40 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 41 H 0.05 -0.20 8.14 -2.38 -0.02 -0.22 16 42 H 0.09 -0.29 8.14 -2.39 -0.02 -0.30 16 43 H 0.09 0.19 8.14 -2.38 -0.02 0.18 16 44 H 0.07 0.18 8.14 -2.39 -0.02 0.16 16 Total: 0.00 -22.94 361.33 0.30 -22.64 By element: Atomic # 1 Polarization: -8.25 SS G_CDS: -0.22 Total: -8.47 kcal Atomic # 6 Polarization: 4.76 SS G_CDS: 5.54 Total: 10.31 kcal Atomic # 7 Polarization: -1.18 SS G_CDS: -2.35 Total: -3.53 kcal Atomic # 8 Polarization: -15.66 SS G_CDS: -4.74 Total: -20.40 kcal Atomic # 14 Polarization: -2.61 SS G_CDS: 2.08 Total: -0.54 kcal Total: -22.94 0.30 -22.64 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12297780.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.673 kcal (2) G-P(sol) polarization free energy of solvation -22.942 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.303 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.639 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.311 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds