Wall clock time and date at job start Mon Mar 8 2021 04:08:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42899 * 114.00297 * 2 1 4 4 H 1.09002 * 112.90351 * 18.75539 * 3 2 1 5 5 C 1.53781 * 113.61275 * 150.00134 * 3 2 1 6 6 C 1.53778 * 87.07865 * 139.98676 * 5 3 2 7 7 H 1.09003 * 113.61419 * 89.20191 * 6 5 3 8 8 N 1.46506 * 113.61261 * 220.01638 * 6 5 3 9 9 C 1.34773 * 119.99969 * 203.19151 * 8 6 5 10 10 O 1.21573 * 120.00176 * 0.02562 * 9 8 6 11 11 C 1.47696 * 119.99730 * 179.97438 * 9 8 6 12 12 C 1.39824 * 120.16366 * 180.02562 * 11 9 8 13 13 F 1.35096 * 120.11149 * 0.02562 * 12 11 9 14 14 C 1.38325 * 119.77711 * 180.02562 * 12 11 9 15 15 C 1.38203 * 120.11777 * 359.97438 * 14 12 11 16 16 C 1.38454 * 120.33657 * 0.02562 * 15 14 12 17 17 C 1.50706 * 119.88851 * 180.02562 * 16 15 14 18 18 O 1.42898 * 109.47123 * 119.99953 * 17 16 15 19 19 Si 1.86306 * 109.46853 * 0.02562 * 17 16 15 20 20 C 1.37854 * 120.22325 * 359.72362 * 16 15 14 21 21 C 1.53777 * 87.17319 * 334.60853 * 6 5 3 22 22 H 1.09004 * 109.47229 * 299.99875 * 1 2 3 23 23 H 1.09002 * 109.47263 * 59.99129 * 1 2 3 24 24 H 1.08998 * 109.47450 * 179.97438 * 1 2 3 25 25 H 1.08990 * 113.61654 * 25.43618 * 5 3 2 26 26 H 1.09006 * 113.69064 * 254.54274 * 5 3 2 27 27 H 0.97005 * 119.99811 * 23.47204 * 8 6 5 28 28 H 1.07999 * 119.93933 * 179.97438 * 14 12 11 29 29 H 1.08000 * 119.82787 * 180.02562 * 15 14 12 30 30 H 1.08994 * 109.47131 * 240.00322 * 17 16 15 31 31 H 0.96696 * 113.99947 * 300.00303 * 18 17 16 32 32 H 1.48499 * 109.99884 * 58.68107 * 19 17 16 33 33 H 1.48503 * 109.99780 * 179.97438 * 19 17 16 34 34 H 1.07997 * 120.06369 * 180.28433 * 20 16 15 35 35 H 1.09001 * 113.61614 * 139.94449 * 21 6 5 36 36 H 1.09001 * 113.61465 * 270.84481 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3143 2.0797 0.3228 5 6 3.3756 1.3717 0.7045 6 6 3.8227 2.3181 -0.4221 7 1 3.6236 3.3694 -0.2141 8 7 5.1935 2.0786 -0.8803 9 6 5.8822 3.0639 -1.4895 10 8 5.3662 4.1516 -1.6585 11 6 7.2644 2.8225 -1.9509 12 6 7.9823 3.8425 -2.5829 13 9 7.4143 5.0533 -2.7735 14 6 9.2761 3.6075 -3.0122 15 6 9.8574 2.3691 -2.8168 16 6 9.1509 1.3557 -2.1916 17 6 9.7950 0.0092 -1.9832 18 8 9.8434 -0.2845 -0.5855 19 14 11.5259 0.0355 -2.6719 20 6 7.8626 1.5761 -1.7535 21 6 2.7533 1.6511 -1.3032 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5140 -0.8899 24 1 -0.3634 -1.0276 -0.0005 25 1 3.9088 0.4212 0.7137 26 1 3.3399 1.8465 1.6851 27 1 5.6040 1.2095 -0.7488 28 1 9.8328 4.3933 -3.5010 29 1 10.8680 2.1909 -3.1536 30 1 9.2114 -0.7558 -2.4952 31 1 10.3477 0.3566 -0.0662 32 1 12.3223 1.0959 -2.0037 33 1 12.1721 -1.2865 -2.4720 34 1 7.3155 0.7852 -1.2620 35 1 2.2145 2.3514 -1.9415 36 1 3.1161 0.7770 -1.8440 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_12335834.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:37 Heat of formation + Delta-G solvation = -94.869842 kcal Electronic energy + Delta-G solvation = -21876.228328 eV Core-core repulsion = 18242.861102 eV Total energy + Delta-G solvation = -3633.367225 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.110 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -50.02970 -41.59169 -40.51764 -39.58835 -37.61605 -37.29348 -34.57339 -32.52492 -32.20422 -27.85687 -26.82814 -26.64907 -26.07983 -24.54441 -22.90243 -21.71685 -21.04349 -19.23028 -18.50483 -18.36780 -18.06875 -17.29666 -16.98077 -16.77831 -16.48818 -16.22650 -16.15959 -15.84538 -15.72509 -15.54408 -15.03043 -14.69600 -14.46653 -14.38079 -13.59597 -13.56952 -13.51016 -13.19409 -12.91679 -12.72826 -12.31240 -12.24478 -12.18561 -11.89216 -11.74007 -11.21974 -10.65104 -10.51856 -10.42980 -10.13613 -9.84030 -4.88072 -0.51925 -0.04428 1.30916 1.56648 1.63522 1.88006 2.02075 2.44790 2.88377 3.03337 3.31881 3.35151 3.47357 3.49879 3.51611 3.61782 3.75632 3.84075 3.99487 4.09376 4.26109 4.46580 4.49737 4.53219 4.60990 4.66937 4.67696 4.77286 4.81157 4.83263 4.90123 4.91390 4.93814 4.98085 5.12600 5.37066 5.58560 6.22063 6.31920 6.49955 6.99243 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.395 6.395 3 C 0.063 3.937 4 H 0.104 0.896 5 C -0.132 4.132 6 C 0.120 3.880 7 H 0.106 0.894 8 N -0.698 5.698 9 C 0.555 3.445 10 O -0.571 6.571 11 C -0.190 4.190 12 C 0.134 3.866 13 F -0.136 7.136 14 C -0.152 4.152 15 C -0.050 4.050 16 C -0.131 4.131 17 C -0.077 4.077 18 O -0.545 6.545 19 Si 0.763 3.237 20 C -0.025 4.025 21 C -0.167 4.167 22 H 0.052 0.948 23 H 0.047 0.953 24 H 0.093 0.907 25 H 0.103 0.897 26 H 0.093 0.907 27 H 0.415 0.585 28 H 0.168 0.832 29 H 0.168 0.832 30 H 0.136 0.864 31 H 0.388 0.612 32 H -0.277 1.277 33 H -0.306 1.306 34 H 0.157 0.843 35 H 0.070 0.930 36 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.161 -3.803 -0.820 4.450 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.314 6.314 3 C 0.004 3.996 4 H 0.122 0.878 5 C -0.170 4.170 6 C 0.015 3.985 7 H 0.123 0.877 8 N -0.349 5.349 9 C 0.343 3.657 10 O -0.451 6.451 11 C -0.194 4.194 12 C 0.114 3.886 13 F -0.115 7.115 14 C -0.170 4.170 15 C -0.068 4.068 16 C -0.132 4.132 17 C -0.186 4.186 18 O -0.353 6.353 19 Si 0.668 3.332 20 C -0.044 4.044 21 C -0.206 4.206 22 H 0.071 0.929 23 H 0.065 0.935 24 H 0.112 0.888 25 H 0.122 0.878 26 H 0.111 0.889 27 H 0.254 0.746 28 H 0.186 0.814 29 H 0.185 0.815 30 H 0.154 0.846 31 H 0.238 0.762 32 H -0.204 1.204 33 H -0.234 1.234 34 H 0.174 0.826 35 H 0.089 0.911 36 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 2.335 -3.748 -0.937 4.514 hybrid contribution -0.443 0.573 1.140 1.351 sum 1.892 -3.175 0.203 3.701 Atomic orbital electron populations 1.22965 0.79789 1.03755 1.00799 1.87901 1.21209 1.27630 1.94643 1.23561 0.94230 0.85682 0.96082 0.87825 1.23560 0.95049 1.00150 0.98262 1.22230 0.80076 1.00263 0.95885 0.87653 1.45711 1.14939 1.15198 1.59095 1.18378 0.85724 0.84066 0.77509 1.90833 1.71112 1.25803 1.57370 1.20049 0.95096 0.96371 1.07841 1.18212 0.92671 0.80150 0.97597 1.91558 1.85232 1.42155 1.92530 1.21395 0.92548 1.00262 1.02796 1.21387 1.00465 0.90753 0.94157 1.20409 0.94699 0.97240 1.00843 1.25199 1.12080 0.95279 0.86004 1.86596 1.76277 1.54589 1.17832 0.94151 0.72296 0.77002 0.89770 1.21181 0.94482 0.93959 0.94766 1.24022 0.97429 1.01109 0.98025 0.92895 0.93478 0.88820 0.87815 0.88879 0.74634 0.81432 0.81467 0.84601 0.76231 1.20350 1.23403 0.82593 0.91137 0.88867 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.40 -1.09 10.72 -148.98 -1.60 -2.68 16 3 C 0.06 -0.03 4.31 31.18 0.13 0.11 16 4 H 0.10 -0.30 7.87 -2.39 -0.02 -0.32 16 5 C -0.13 0.31 7.66 31.12 0.24 0.55 16 6 C 0.12 0.14 4.21 45.51 0.19 0.33 16 7 H 0.11 0.47 7.51 -2.39 -0.02 0.46 16 8 N -0.70 -0.71 5.31 -443.05 -2.35 -3.07 16 9 C 0.55 4.37 7.77 86.74 0.67 5.05 16 10 O -0.57 -9.72 14.96 -3.94 -0.06 -9.78 16 11 C -0.19 -0.68 5.88 -20.05 -0.12 -0.80 16 12 C 0.13 0.69 7.29 22.67 0.17 0.86 16 13 F -0.14 -1.66 15.55 44.97 0.70 -0.97 16 14 C -0.15 0.36 10.01 22.28 0.22 0.58 16 15 C -0.05 0.32 8.66 22.31 0.19 0.52 16 16 C -0.13 0.73 5.39 -19.90 -0.11 0.62 16 17 C -0.08 0.53 2.82 71.24 0.20 0.73 16 18 O -0.54 2.00 12.76 -148.98 -1.90 0.10 16 19 Si 0.76 -5.45 29.77 68.60 2.04 -3.41 16 20 C -0.03 0.08 9.09 22.52 0.20 0.28 16 21 C -0.17 -0.16 7.73 31.18 0.24 0.08 16 22 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 23 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 24 H 0.09 -0.32 8.14 -2.39 -0.02 -0.33 16 25 H 0.10 -0.35 8.11 -2.39 -0.02 -0.37 16 26 H 0.09 -0.37 8.14 -2.38 -0.02 -0.39 16 27 H 0.41 -1.99 6.75 -92.70 -0.63 -2.62 16 28 H 0.17 -1.10 8.06 -2.91 -0.02 -1.12 16 29 H 0.17 -1.98 4.86 -2.91 -0.01 -2.00 16 30 H 0.14 -1.24 7.96 -2.39 -0.02 -1.26 16 31 H 0.39 -3.41 8.70 -74.06 -0.64 -4.05 16 32 H -0.28 1.02 7.11 99.48 0.71 1.73 16 33 H -0.31 -0.57 7.11 99.48 0.71 0.14 16 34 H 0.16 -1.13 6.41 -2.91 -0.02 -1.15 16 35 H 0.07 0.16 8.14 -2.39 -0.02 0.14 16 36 H 0.09 0.12 8.14 -2.39 -0.02 0.10 16 Total: 0.00 -21.31 310.01 0.20 -21.11 By element: Atomic # 1 Polarization: -11.30 SS G_CDS: -0.10 Total: -11.40 kcal Atomic # 6 Polarization: 6.63 SS G_CDS: 3.47 Total: 10.10 kcal Atomic # 7 Polarization: -0.71 SS G_CDS: -2.35 Total: -3.07 kcal Atomic # 8 Polarization: -8.81 SS G_CDS: -3.56 Total: -12.36 kcal Atomic # 9 Polarization: -1.66 SS G_CDS: 0.70 Total: -0.97 kcal Atomic # 14 Polarization: -5.45 SS G_CDS: 2.04 Total: -3.41 kcal Total: -21.31 0.20 -21.11 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12335834.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.757 kcal (2) G-P(sol) polarization free energy of solvation -21.312 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.070 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.200 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.112 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.870 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds