Wall clock time and date at job start Mon Mar 8 2021 04:08:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42898 * 114.00425 * 2 1 4 4 H 1.09001 * 112.90387 * 341.25378 * 3 2 1 5 5 C 1.53785 * 113.61652 * 112.50118 * 3 2 1 6 6 C 1.53782 * 87.07877 * 139.98257 * 5 3 2 7 7 H 1.08996 * 113.68851 * 89.12960 * 6 5 3 8 8 N 1.46493 * 113.61105 * 220.01974 * 6 5 3 9 9 C 1.34783 * 120.00174 * 252.49882 * 8 6 5 10 10 O 1.21597 * 119.99426 * 0.02562 * 9 8 6 11 11 C 1.47571 * 120.00534 * 180.02562 * 9 8 6 12 12 C 1.40202 * 119.83021 * 0.02562 * 11 9 8 13 13 C 1.36238 * 120.38102 * 180.02562 * 12 11 9 14 14 C 1.39878 * 119.95479 * 359.73310 * 13 12 11 15 15 C 1.46261 * 133.83500 * 179.62678 * 14 13 12 16 16 C 1.50699 * 126.48357 * 0.68293 * 15 14 13 17 17 O 1.42894 * 109.47188 * 74.71406 * 16 15 14 18 18 Si 1.86298 * 109.46950 * 194.72079 * 16 15 14 19 19 C 1.34462 * 107.03252 * 180.42795 * 15 14 13 20 20 N 1.36562 * 109.98239 * 0.21917 * 19 15 14 21 21 C 1.37828 * 109.86570 * 0.02562 * 20 19 15 22 22 C 1.38640 * 133.38349 * 180.02562 * 21 20 19 23 23 C 1.53779 * 87.08397 * 334.56872 * 6 5 3 24 24 H 1.09000 * 109.47674 * 180.02562 * 1 2 3 25 25 H 1.09007 * 109.47016 * 300.00527 * 1 2 3 26 26 H 1.09001 * 109.47206 * 60.00186 * 1 2 3 27 27 H 1.08997 * 113.61154 * 25.43455 * 5 3 2 28 28 H 1.08995 * 113.61106 * 254.53318 * 5 3 2 29 29 H 0.97003 * 120.00791 * 72.49770 * 8 6 5 30 30 H 1.08000 * 119.81489 * 0.02562 * 12 11 9 31 31 H 1.07994 * 120.02105 * 180.02562 * 13 12 11 32 32 H 1.09006 * 109.46662 * 314.71675 * 16 15 14 33 33 H 0.96709 * 113.99337 * 60.00344 * 17 16 15 34 34 H 1.48506 * 109.99834 * 180.02562 * 18 16 15 35 35 H 1.48502 * 110.00011 * 301.31529 * 18 16 15 36 36 H 1.07996 * 125.00412 * 180.22711 * 19 15 14 37 37 H 0.97004 * 125.06623 * 179.97438 * 20 19 15 38 38 H 1.08008 * 120.16602 * 0.02562 * 22 21 20 39 39 H 1.08994 * 113.61742 * 139.98003 * 23 6 5 40 40 H 1.08996 * 113.61324 * 270.88627 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3143 2.0797 -0.3227 5 6 2.7535 1.6488 1.3018 6 6 3.8228 2.3180 0.4222 7 1 3.6237 3.3693 0.2143 8 7 5.1935 2.0784 0.8803 9 6 5.8952 3.0743 1.4568 10 8 5.3903 4.1716 1.5970 11 6 7.2761 2.8332 1.9178 12 6 7.8550 1.5668 1.7539 13 6 9.1289 1.3317 2.1758 14 6 9.8682 2.3589 2.7713 15 6 11.2184 2.4443 3.3271 16 6 12.2368 1.3348 3.3814 17 8 12.7840 1.1262 2.0780 18 14 13.6015 1.8019 4.5605 19 6 11.3812 3.7016 3.7751 20 7 10.2443 4.4259 3.5561 21 6 9.2950 3.6344 2.9462 22 6 7.9981 3.8650 2.5137 23 6 3.3756 1.3718 -0.7045 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3633 0.5139 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 3.1167 0.7740 1.8410 28 1 2.2141 2.3476 1.9411 29 1 5.5962 1.2030 0.7688 30 1 7.2879 0.7731 1.2904 31 1 9.5692 0.3541 2.0463 32 1 11.7574 0.4182 3.7253 33 1 13.2270 1.9024 1.7086 34 1 14.6128 0.7161 4.6226 35 1 14.2422 3.0672 4.1203 36 1 12.2787 4.0824 4.2397 37 1 10.1229 5.3582 3.7948 38 1 7.5500 4.8400 2.6372 39 1 3.3384 1.8469 -1.6848 40 1 3.9088 0.4212 -0.7137 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_12335838.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:44 Heat of formation + Delta-G solvation = -18.506223 kcal Electronic energy + Delta-G solvation = -23716.922598 eV Core-core repulsion = 20078.904912 eV Total energy + Delta-G solvation = -3638.017686 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 303.130 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.47796 -41.19922 -39.84359 -37.97880 -37.54170 -37.14384 -34.15648 -33.25633 -30.71560 -30.56111 -27.85166 -26.78978 -26.56071 -25.66111 -23.79816 -23.59742 -21.43788 -21.04730 -20.77402 -19.39130 -18.35359 -18.26722 -17.53633 -16.98468 -16.81463 -16.50995 -16.27713 -16.13994 -15.71789 -15.66502 -15.40542 -15.07397 -14.96014 -14.73290 -14.70329 -14.32920 -13.88341 -13.52070 -13.48326 -13.11946 -12.76589 -12.61531 -12.48534 -12.22091 -12.13337 -12.13038 -11.86413 -11.79685 -10.86976 -10.74938 -10.49225 -10.48262 -10.02051 -9.34296 -8.81111 -4.97864 -0.24918 0.41192 1.28402 1.36535 1.53784 1.87221 1.94790 2.02770 2.21276 2.90708 2.94457 3.41462 3.47013 3.52984 3.59990 3.74171 3.76219 3.81332 3.84623 3.88419 4.11915 4.26474 4.33290 4.42866 4.44440 4.45186 4.53401 4.58058 4.68162 4.70274 4.76336 4.76913 4.90946 4.96169 5.00077 5.06122 5.25771 5.44956 5.45457 5.56171 5.62017 5.99766 6.22107 6.35783 6.48878 6.52723 7.25891 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.168 4.168 6 C 0.125 3.875 7 H 0.120 0.880 8 N -0.713 5.713 9 C 0.565 3.435 10 O -0.539 6.539 11 C -0.121 4.121 12 C -0.113 4.113 13 C -0.072 4.072 14 C -0.063 4.063 15 C -0.206 4.206 16 C -0.038 4.038 17 O -0.531 6.531 18 Si 0.684 3.316 19 C 0.074 3.926 20 N -0.584 5.584 21 C 0.081 3.919 22 C -0.056 4.056 23 C -0.144 4.144 24 H 0.087 0.913 25 H 0.043 0.957 26 H 0.043 0.957 27 H 0.095 0.905 28 H 0.076 0.924 29 H 0.403 0.597 30 H 0.126 0.874 31 H 0.131 0.869 32 H 0.115 0.885 33 H 0.374 0.626 34 H -0.256 1.256 35 H -0.260 1.260 36 H 0.176 0.824 37 H 0.422 0.578 38 H 0.136 0.864 39 H 0.082 0.918 40 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.271 0.135 1.835 1.859 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.207 4.207 6 C 0.020 3.980 7 H 0.138 0.862 8 N -0.365 5.365 9 C 0.353 3.647 10 O -0.417 6.417 11 C -0.126 4.126 12 C -0.133 4.133 13 C -0.090 4.090 14 C -0.068 4.068 15 C -0.214 4.214 16 C -0.148 4.148 17 O -0.337 6.337 18 Si 0.585 3.415 19 C -0.055 4.055 20 N -0.186 5.186 21 C -0.025 4.025 22 C -0.077 4.077 23 C -0.182 4.182 24 H 0.105 0.895 25 H 0.061 0.939 26 H 0.062 0.938 27 H 0.113 0.887 28 H 0.095 0.905 29 H 0.239 0.761 30 H 0.144 0.856 31 H 0.149 0.851 32 H 0.133 0.867 33 H 0.221 0.779 34 H -0.181 1.181 35 H -0.185 1.185 36 H 0.193 0.807 37 H 0.260 0.740 38 H 0.154 0.846 39 H 0.101 0.899 40 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 0.617 0.444 2.157 2.287 hybrid contribution 0.071 0.586 -1.062 1.215 sum 0.688 1.030 1.095 1.653 Atomic orbital electron populations 1.22829 0.80769 1.03052 1.00134 1.87939 1.19991 1.26871 1.94562 1.23457 0.93742 0.85782 0.96518 0.88935 1.24024 0.97449 1.01475 0.97794 1.22213 0.80410 1.00549 0.94872 0.86223 1.45799 1.14715 1.14363 1.61584 1.18196 0.85325 0.84098 0.77050 1.90788 1.71086 1.23876 1.55946 1.19421 0.94058 0.94630 1.04473 1.20697 0.95646 0.95651 1.01295 1.20208 0.93227 0.98433 0.97161 1.19171 0.93651 0.92893 1.01056 1.20673 0.95743 0.95472 1.09523 1.24294 0.99954 0.99607 0.90976 1.86612 1.75254 1.40752 1.31046 0.95171 0.78925 0.79911 0.87445 1.21820 0.90819 0.91607 1.01235 1.41720 1.11394 1.13041 1.52420 1.18079 0.91642 0.91369 1.01404 1.20071 0.90476 0.99714 0.97476 1.23631 0.95688 1.00437 0.98490 0.89471 0.93855 0.93818 0.88656 0.90541 0.76065 0.85611 0.85126 0.86706 0.77888 1.18067 1.18517 0.80706 0.74026 0.84626 0.89911 0.88436 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.59 10.71 -35.23 -0.38 -0.97 16 3 C 0.06 -0.01 4.31 -25.92 -0.11 -0.12 16 4 H 0.09 -0.13 7.87 -51.93 -0.41 -0.54 16 5 C -0.17 -0.03 7.71 -25.92 -0.20 -0.23 16 6 C 0.12 0.03 4.24 -67.12 -0.28 -0.25 16 7 H 0.12 0.16 7.46 -51.93 -0.39 -0.23 16 8 N -0.71 -0.30 5.30 -54.05 -0.29 -0.59 16 9 C 0.56 1.77 7.76 -12.45 -0.10 1.68 16 10 O -0.54 -3.52 15.91 5.28 0.08 -3.44 16 11 C -0.12 -0.25 5.87 -104.95 -0.62 -0.87 16 12 C -0.11 -0.05 9.46 -39.56 -0.37 -0.42 16 13 C -0.07 -0.07 10.03 -39.69 -0.40 -0.47 16 14 C -0.06 -0.11 6.35 -105.04 -0.67 -0.77 16 15 C -0.21 -0.01 5.57 -102.74 -0.57 -0.58 16 16 C -0.04 0.02 3.06 36.01 0.11 0.13 16 17 O -0.53 -0.60 12.88 -35.23 -0.45 -1.05 16 18 Si 0.68 -1.29 30.82 -169.99 -5.24 -6.53 16 19 C 0.07 -0.12 10.43 -16.78 -0.17 -0.30 16 20 N -0.58 0.71 6.07 -10.68 -0.06 0.65 16 21 C 0.08 0.11 7.26 -84.00 -0.61 -0.50 16 22 C -0.06 -0.12 9.61 -39.03 -0.37 -0.49 16 23 C -0.14 0.13 7.66 -25.92 -0.20 -0.07 16 24 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 25 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 26 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 27 H 0.09 0.05 8.14 -51.93 -0.42 -0.37 16 28 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 29 H 0.40 -0.75 6.72 -40.82 -0.27 -1.03 16 30 H 0.13 -0.28 6.36 -52.49 -0.33 -0.62 16 31 H 0.13 -0.02 8.06 -52.49 -0.42 -0.44 16 32 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 33 H 0.37 -0.63 8.70 45.56 0.40 -0.23 16 34 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 35 H -0.26 0.16 7.00 56.52 0.40 0.55 16 36 H 0.18 -0.77 6.27 -52.49 -0.33 -1.10 16 37 H 0.42 -1.65 8.96 -40.82 -0.37 -2.02 16 38 H 0.14 0.26 7.62 -52.48 -0.40 -0.14 16 39 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 40 H 0.10 -0.11 8.12 -51.93 -0.42 -0.53 16 LS Contribution 338.92 15.07 5.11 5.11 Total: 0.00 -8.91 338.92 -9.80 -18.72 By element: Atomic # 1 Polarization: -4.60 SS G_CDS: -5.10 Total: -9.70 kcal Atomic # 6 Polarization: 1.28 SS G_CDS: -3.47 Total: -2.20 kcal Atomic # 7 Polarization: 0.41 SS G_CDS: -0.35 Total: 0.06 kcal Atomic # 8 Polarization: -4.71 SS G_CDS: -0.75 Total: -5.46 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.24 Total: -6.53 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -8.91 -9.80 -18.72 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12335838.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.210 kcal (2) G-P(sol) polarization free energy of solvation -8.913 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.702 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.804 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.717 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.506 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds