Wall clock time and date at job start Mon Mar 8 2021 04:08:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42898 * 113.99620 * 2 1 4 4 H 1.09002 * 112.85164 * 341.19707 * 3 2 1 5 5 C 1.53788 * 113.69146 * 112.46720 * 3 2 1 6 6 C 1.53779 * 87.08145 * 139.99064 * 5 3 2 7 7 H 1.09000 * 113.68953 * 89.12826 * 6 5 3 8 8 N 1.46500 * 113.61281 * 220.02264 * 6 5 3 9 9 C 1.34785 * 119.99530 * 252.49926 * 8 6 5 10 10 O 1.21544 * 120.00317 * 359.97438 * 9 8 6 11 11 C 1.47861 * 119.99431 * 180.02562 * 9 8 6 12 12 C 1.39465 * 120.10810 * 180.02562 * 11 9 8 13 13 C 1.38584 * 119.78468 * 180.02562 * 12 11 9 14 14 N 1.40224 * 119.99940 * 180.02562 * 13 12 11 15 15 C 1.36564 * 125.66925 * 269.67141 * 14 13 12 16 16 C 1.50705 * 125.89917 * 359.95931 * 15 14 13 17 17 C 1.34853 * 108.20166 * 179.82409 * 15 14 13 18 18 C 1.40939 * 107.46418 * 0.42750 * 17 15 14 19 19 C 1.50700 * 126.26366 * 179.73411 * 18 17 15 20 20 O 1.42901 * 109.47196 * 104.99695 * 19 18 17 21 21 Si 1.86309 * 109.47122 * 344.99875 * 19 18 17 22 22 C 1.34852 * 107.46855 * 359.73158 * 18 17 15 23 23 C 1.50704 * 125.89683 * 179.97438 * 22 18 17 24 24 C 1.38915 * 120.01159 * 359.97438 * 13 12 11 25 25 C 1.50693 * 119.88710 * 179.72726 * 24 13 12 26 26 C 1.38266 * 120.22170 * 0.02562 * 24 13 12 27 27 C 1.37973 * 120.22332 * 359.97438 * 26 24 13 28 28 C 1.53779 * 113.61543 * 210.00061 * 3 2 1 29 29 H 1.09000 * 109.46865 * 299.99683 * 1 2 3 30 30 H 1.09001 * 109.47245 * 60.00084 * 1 2 3 31 31 H 1.09002 * 109.47122 * 179.97438 * 1 2 3 32 32 H 1.08997 * 113.61170 * 25.44062 * 5 3 2 33 33 H 1.08993 * 113.61263 * 254.53901 * 5 3 2 34 34 H 0.97000 * 120.00653 * 72.49732 * 8 6 5 35 35 H 1.08004 * 120.10813 * 0.03806 * 12 11 9 36 36 H 1.09004 * 109.46843 * 89.99993 * 16 15 14 37 37 H 1.08998 * 109.47336 * 210.00059 * 16 15 14 38 38 H 1.09003 * 109.47013 * 330.00041 * 16 15 14 39 39 H 1.08001 * 126.26675 * 180.15687 * 17 15 14 40 40 H 1.09000 * 109.46967 * 224.99855 * 19 18 17 41 41 H 0.96701 * 113.99923 * 299.99836 * 20 19 18 42 42 H 1.48501 * 109.99751 * 58.68163 * 21 19 18 43 43 H 1.48502 * 109.99869 * 180.02562 * 21 19 18 44 44 H 1.09000 * 109.46828 * 270.02574 * 23 22 18 45 45 H 1.09005 * 109.47081 * 30.02448 * 23 22 18 46 46 H 1.09000 * 109.46998 * 150.02422 * 23 22 18 47 47 H 1.08992 * 109.47446 * 90.00525 * 25 24 13 48 48 H 1.09001 * 109.46872 * 210.00370 * 25 24 13 49 49 H 1.09000 * 109.47299 * 329.99867 * 25 24 13 50 50 H 1.08002 * 119.88718 * 179.97438 * 26 24 13 51 51 H 1.07997 * 120.01198 * 179.97438 * 27 26 24 52 52 H 1.09007 * 113.61476 * 105.38656 * 28 3 2 53 53 H 1.09004 * 113.68994 * 334.49921 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 1 1.3136 2.0789 -0.3238 5 6 2.7531 1.6511 1.3014 6 6 3.8219 2.3200 0.4210 7 1 3.6220 3.3709 0.2117 8 7 5.1928 2.0820 0.8795 9 6 5.8937 3.0793 1.4547 10 8 5.3885 4.1761 1.5927 11 6 7.2775 2.8391 1.9169 12 6 8.0047 3.8692 2.5130 13 6 9.3014 3.6368 2.9432 14 7 10.0364 4.6691 3.5436 15 6 10.8435 5.5561 2.8903 16 6 11.0966 5.5924 1.4051 17 6 11.3726 6.3957 3.8033 18 6 10.8834 6.0089 5.0672 19 6 11.2108 6.6588 6.3869 20 8 10.0965 7.4404 6.8224 21 14 12.7002 7.7597 6.1844 22 6 10.0686 4.9509 4.8794 23 6 9.3231 4.2074 5.9577 24 6 9.8729 2.3811 2.7808 25 6 11.2853 2.1333 3.2441 26 6 9.1523 1.3597 2.1899 27 6 7.8606 1.5806 1.7581 28 6 3.3754 1.3720 -0.7045 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 3.1169 0.7772 1.8417 33 1 2.2132 2.3504 1.9398 34 1 5.5961 1.2068 0.7691 35 1 7.5586 4.8447 2.6390 36 1 10.3602 6.2382 0.9267 37 1 12.0975 5.9807 1.2164 38 1 11.0152 4.5846 0.9979 39 1 12.0508 7.2121 3.6032 40 1 11.4262 5.8887 7.1276 41 1 9.8483 8.1467 6.2103 42 1 12.4305 8.7945 5.1540 43 1 13.0337 8.4061 7.4791 44 1 9.9428 3.3927 6.3322 45 1 9.0884 4.8904 6.7742 46 1 8.3988 3.8015 5.5465 47 1 11.2737 1.7937 4.2797 48 1 11.7448 1.3697 2.6165 49 1 11.8590 3.0572 3.1711 50 1 9.6021 0.3856 2.0660 51 1 7.3011 0.7804 1.2967 52 1 3.3380 1.8460 -1.6855 53 1 3.9104 0.4223 -0.7135 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_12335842.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:46 Heat of formation + Delta-G solvation = -3.713545 kcal Electronic energy + Delta-G solvation = -33806.752244 eV Core-core repulsion = 29418.999401 eV Total energy + Delta-G solvation = -4387.752843 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.193 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -42.95708 -41.57983 -40.39184 -39.41280 -37.83742 -37.32645 -35.01871 -33.91597 -33.66150 -33.62287 -30.65272 -30.15103 -28.79395 -27.77105 -27.18090 -26.80026 -25.32097 -24.66983 -23.67201 -23.45469 -21.96272 -21.29915 -20.89230 -20.21298 -18.74023 -18.36074 -17.62615 -17.50177 -17.20265 -16.76938 -16.74790 -16.39506 -16.16089 -16.00286 -15.88462 -15.57183 -15.27761 -15.10376 -15.00389 -14.83078 -14.67980 -14.53192 -14.27312 -14.15049 -13.95855 -13.59349 -13.50939 -13.43211 -13.37845 -13.16612 -13.15855 -12.99252 -12.85239 -12.80186 -12.66847 -12.40234 -12.24409 -12.18521 -12.16611 -11.89127 -11.69515 -11.22336 -10.51642 -10.51448 -10.29061 -10.19400 -9.89848 -9.72399 -8.82254 -4.85295 -0.46546 -0.04628 1.06737 1.42979 1.55032 1.65483 1.73625 1.78906 1.96486 2.04816 2.51738 2.88974 3.35227 3.45741 3.49868 3.55921 3.60230 3.67151 3.74515 3.75978 3.83994 3.88005 3.98274 4.09838 4.15012 4.25757 4.31680 4.38326 4.42334 4.49535 4.52804 4.54835 4.59822 4.64428 4.67080 4.67925 4.68409 4.68719 4.69590 4.73344 4.83105 4.89221 4.91106 4.94383 4.97021 5.01855 5.02870 5.03577 5.11679 5.13209 5.26817 5.36230 5.37142 5.55181 5.99288 6.15353 6.21849 6.35053 6.48389 6.55836 7.00706 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.394 6.394 3 C 0.061 3.939 4 H 0.102 0.898 5 C -0.167 4.167 6 C 0.120 3.880 7 H 0.104 0.896 8 N -0.696 5.696 9 C 0.560 3.440 10 O -0.582 6.582 11 C -0.145 4.145 12 C -0.057 4.057 13 C 0.088 3.912 14 N -0.400 5.400 15 C 0.019 3.981 16 C -0.083 4.083 17 C -0.199 4.199 18 C -0.201 4.201 19 C -0.047 4.047 20 O -0.553 6.553 21 Si 0.778 3.222 22 C 0.042 3.958 23 C -0.082 4.082 24 C -0.039 4.039 25 C -0.121 4.121 26 C -0.111 4.111 27 C -0.055 4.055 28 C -0.131 4.131 29 H 0.046 0.954 30 H 0.052 0.948 31 H 0.094 0.906 32 H 0.095 0.905 33 H 0.067 0.933 34 H 0.417 0.583 35 H 0.111 0.889 36 H 0.065 0.935 37 H 0.099 0.901 38 H 0.065 0.935 39 H 0.150 0.850 40 H 0.115 0.885 41 H 0.381 0.619 42 H -0.289 1.289 43 H -0.305 1.305 44 H 0.086 0.914 45 H 0.080 0.920 46 H 0.053 0.947 47 H 0.084 0.916 48 H 0.097 0.903 49 H 0.062 0.938 50 H 0.175 0.825 51 H 0.168 0.832 52 H 0.092 0.908 53 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.162 -8.542 -4.648 9.962 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.313 6.313 3 C 0.003 3.997 4 H 0.120 0.880 5 C -0.206 4.206 6 C 0.015 3.985 7 H 0.122 0.878 8 N -0.348 5.348 9 C 0.348 3.652 10 O -0.462 6.462 11 C -0.149 4.149 12 C -0.077 4.077 13 C -0.001 4.001 14 N -0.075 5.075 15 C -0.089 4.089 16 C -0.140 4.140 17 C -0.223 4.223 18 C -0.208 4.208 19 C -0.157 4.157 20 O -0.361 6.361 21 Si 0.685 3.315 22 C -0.068 4.068 23 C -0.140 4.140 24 C -0.040 4.040 25 C -0.177 4.177 26 C -0.129 4.129 27 C -0.074 4.074 28 C -0.169 4.169 29 H 0.064 0.936 30 H 0.071 0.929 31 H 0.112 0.888 32 H 0.113 0.887 33 H 0.086 0.914 34 H 0.256 0.744 35 H 0.129 0.871 36 H 0.084 0.916 37 H 0.117 0.883 38 H 0.084 0.916 39 H 0.168 0.832 40 H 0.132 0.868 41 H 0.230 0.770 42 H -0.216 1.216 43 H -0.234 1.234 44 H 0.104 0.896 45 H 0.099 0.901 46 H 0.072 0.928 47 H 0.102 0.898 48 H 0.116 0.884 49 H 0.081 0.919 50 H 0.192 0.808 51 H 0.185 0.815 52 H 0.110 0.890 53 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges 2.063 -7.805 -4.174 9.088 hybrid contribution -1.561 1.039 0.004 1.875 sum 0.502 -6.766 -4.169 7.963 Atomic orbital electron populations 1.22962 0.79840 1.03762 1.00742 1.87898 1.21145 1.27617 1.94653 1.23540 0.94334 0.85654 0.96200 0.88038 1.24000 0.97468 1.01140 0.98025 1.22213 0.80156 1.00237 0.95867 0.87758 1.45683 1.14617 1.14229 1.60223 1.18487 0.85769 0.83983 0.76942 1.90783 1.71902 1.25875 1.57679 1.19684 0.94015 0.95805 1.05408 1.21167 0.92672 0.99028 0.94798 1.17414 0.91275 0.88567 1.02807 1.41340 1.36139 1.24261 1.05739 1.20726 0.98327 0.93928 0.95960 1.20365 1.03699 1.02715 0.87239 1.20758 1.06810 1.03120 0.91610 1.19625 1.05296 1.00364 0.95504 1.24495 0.97328 0.99521 0.94342 1.86526 1.50108 1.48869 1.50610 0.93887 0.81982 0.79556 0.76110 1.20484 1.03138 0.99811 0.83339 1.20313 0.98503 0.99945 0.95191 1.20564 0.97747 0.91116 0.94616 1.20923 0.90515 1.03543 1.02744 1.21369 0.93722 1.00022 0.97741 1.21758 0.95403 0.94908 0.95286 1.23570 0.94891 1.00250 0.98212 0.93572 0.92930 0.88787 0.88684 0.91376 0.74366 0.87114 0.91581 0.88258 0.91597 0.83225 0.86751 0.77028 1.21618 1.23375 0.89560 0.90138 0.92757 0.89782 0.88409 0.91886 0.80773 0.81457 0.88961 0.87469 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.39 -0.60 10.72 -148.98 -1.60 -2.20 16 3 C 0.06 -0.11 4.31 31.12 0.13 0.03 16 4 H 0.10 -0.38 7.87 -2.39 -0.02 -0.40 16 5 C -0.17 0.09 7.71 31.12 0.24 0.33 16 6 C 0.12 -0.08 4.24 45.52 0.19 0.11 16 7 H 0.10 0.32 7.46 -2.39 -0.02 0.30 16 8 N -0.70 1.10 5.31 -442.89 -2.35 -1.25 16 9 C 0.56 3.11 7.77 86.79 0.67 3.79 16 10 O -0.58 -8.79 15.94 -3.85 -0.06 -8.85 16 11 C -0.15 -0.29 5.87 -20.10 -0.12 -0.41 16 12 C -0.06 -0.34 9.51 22.65 0.22 -0.13 16 13 C 0.09 0.28 4.49 38.04 0.17 0.45 16 14 N -0.40 -2.01 1.87 -320.36 -0.60 -2.61 16 15 C 0.02 0.09 6.29 41.05 0.26 0.34 16 16 C -0.08 -0.01 10.09 71.24 0.72 0.70 16 17 C -0.20 -0.92 9.27 22.15 0.21 -0.72 16 18 C -0.20 -1.10 5.35 -19.98 -0.11 -1.20 16 19 C -0.05 -0.19 2.50 71.24 0.18 -0.02 16 20 O -0.55 -4.14 12.88 -148.98 -1.92 -6.06 16 21 Si 0.78 1.66 30.86 68.60 2.12 3.78 16 22 C 0.04 0.25 6.86 41.05 0.28 0.54 16 23 C -0.08 -0.30 9.88 71.24 0.70 0.41 16 24 C -0.04 0.09 5.90 -19.70 -0.12 -0.03 16 25 C -0.12 0.57 9.76 71.23 0.69 1.27 16 26 C -0.11 0.75 9.67 22.21 0.21 0.97 16 27 C -0.06 0.33 9.54 22.54 0.21 0.54 16 28 C -0.13 0.56 7.66 31.12 0.24 0.79 16 29 H 0.05 -0.15 8.14 -2.39 -0.02 -0.17 16 30 H 0.05 -0.23 8.14 -2.39 -0.02 -0.25 16 31 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 32 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 33 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 34 H 0.42 -3.51 6.76 -92.71 -0.63 -4.13 16 35 H 0.11 1.29 7.65 -2.91 -0.02 1.27 16 36 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 37 H 0.10 -0.33 8.14 -2.39 -0.02 -0.35 16 38 H 0.07 -0.03 7.83 -2.39 -0.02 -0.05 16 39 H 0.15 0.32 6.52 -2.91 -0.02 0.30 16 40 H 0.11 0.26 7.96 -2.39 -0.02 0.24 16 41 H 0.38 1.22 8.70 -74.06 -0.64 0.57 16 42 H -0.29 -1.88 7.01 99.48 0.70 -1.18 16 43 H -0.31 -2.76 7.11 99.48 0.71 -2.06 16 44 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 45 H 0.08 0.40 7.87 -2.38 -0.02 0.38 16 46 H 0.05 0.26 7.83 -2.39 -0.02 0.24 16 47 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 48 H 0.10 -0.87 8.08 -2.39 -0.02 -0.89 16 49 H 0.06 -0.08 6.96 -2.39 -0.02 -0.10 16 50 H 0.17 -2.31 8.06 -2.91 -0.02 -2.33 16 51 H 0.17 -2.22 6.40 -2.91 -0.02 -2.24 16 52 H 0.09 -0.51 8.14 -2.38 -0.02 -0.53 16 53 H 0.11 -0.64 8.12 -2.38 -0.02 -0.66 16 Total: 0.00 -22.62 434.72 1.51 -21.11 By element: Atomic # 1 Polarization: -12.54 SS G_CDS: -0.31 Total: -12.85 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: 6.23 Total: 8.93 kcal Atomic # 7 Polarization: -0.92 SS G_CDS: -2.95 Total: -3.86 kcal Atomic # 8 Polarization: -13.53 SS G_CDS: -3.58 Total: -17.11 kcal Atomic # 14 Polarization: 1.66 SS G_CDS: 2.12 Total: 3.78 kcal Total: -22.62 1.51 -21.11 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12335842.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.400 kcal (2) G-P(sol) polarization free energy of solvation -22.621 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.221 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.507 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.114 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.714 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds