Wall clock time and date at job start Mon Mar 8 2021 04:08:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42904 * 114.00162 * 2 1 4 4 H 1.08999 * 112.84982 * 341.19338 * 3 2 1 5 5 C 1.53778 * 113.61418 * 112.50236 * 3 2 1 6 6 C 1.53789 * 87.07974 * 139.98277 * 5 3 2 7 7 H 1.08991 * 113.69288 * 89.12663 * 6 5 3 8 8 N 1.46496 * 113.61220 * 220.01977 * 6 5 3 9 9 C 1.34782 * 120.00028 * 252.49746 * 8 6 5 10 10 O 1.21552 * 119.99734 * 359.97438 * 9 8 6 11 11 C 1.47857 * 120.00239 * 180.02562 * 9 8 6 12 12 C 1.39582 * 120.11362 * 0.28903 * 11 9 8 13 13 C 1.38011 * 119.98735 * 180.23807 * 12 11 9 14 14 C 1.38228 * 120.21523 * 359.46698 * 13 12 11 15 15 C 1.38946 * 120.22664 * 0.28293 * 14 13 12 16 16 N 1.40229 * 119.99394 * 180.02562 * 15 14 13 17 17 C 1.36563 * 125.67011 * 115.02135 * 16 15 14 18 18 C 1.50704 * 125.90010 * 359.96430 * 17 16 15 19 19 C 1.34852 * 108.19994 * 179.97438 * 17 16 15 20 20 C 1.40937 * 107.46712 * 359.97438 * 19 17 16 21 21 C 1.50704 * 126.26873 * 180.02562 * 20 19 17 22 22 O 1.42900 * 109.47071 * 104.97805 * 21 20 19 23 23 Si 1.86300 * 109.46805 * 344.98382 * 21 20 19 24 24 C 1.34855 * 107.46754 * 359.77523 * 20 19 17 25 25 C 1.50700 * 125.90048 * 180.22370 * 24 20 19 26 26 C 1.38553 * 120.01268 * 359.97380 * 15 14 13 27 27 C 1.53777 * 113.61291 * 210.00164 * 3 2 1 28 28 H 1.09006 * 109.46897 * 300.00186 * 1 2 3 29 29 H 1.09001 * 109.46798 * 59.99735 * 1 2 3 30 30 H 1.08995 * 109.47424 * 180.02562 * 1 2 3 31 31 H 1.09002 * 113.61706 * 25.43328 * 5 3 2 32 32 H 1.08998 * 113.61489 * 254.52412 * 5 3 2 33 33 H 0.97000 * 120.00544 * 72.49437 * 8 6 5 34 34 H 1.08008 * 120.00502 * 0.02562 * 12 11 9 35 35 H 1.08002 * 119.89619 * 179.75187 * 13 12 11 36 36 H 1.07997 * 119.88386 * 180.25932 * 14 13 12 37 37 H 1.09000 * 109.47141 * 89.99646 * 18 17 16 38 38 H 1.08998 * 109.46991 * 210.00097 * 18 17 16 39 39 H 1.08996 * 109.47067 * 329.99810 * 18 17 16 40 40 H 1.07997 * 126.26487 * 180.02562 * 19 17 16 41 41 H 1.08993 * 109.47265 * 224.97963 * 21 20 19 42 42 H 0.96702 * 114.00198 * 180.02562 * 22 21 20 43 43 H 1.48501 * 109.99889 * 298.67636 * 23 21 20 44 44 H 1.48493 * 110.00354 * 59.99428 * 23 21 20 45 45 H 1.08995 * 109.47194 * 270.16414 * 25 24 20 46 46 H 1.09003 * 109.47125 * 30.16642 * 25 24 20 47 47 H 1.09004 * 109.47286 * 150.16045 * 25 24 20 48 48 H 1.07996 * 120.10729 * 180.02562 * 26 15 14 49 49 H 1.08996 * 113.61979 * 105.46967 * 27 3 2 50 50 H 1.09008 * 113.61667 * 334.56420 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 1 1.3138 2.0789 -0.3238 5 6 2.7535 1.6489 1.3017 6 6 3.8228 2.3182 0.4221 7 1 3.6237 3.3694 0.2142 8 7 5.1935 2.0786 0.8802 9 6 5.8952 3.0745 1.4567 10 8 5.3908 4.1716 1.5961 11 6 7.2788 2.8329 1.9186 12 6 7.8629 1.5760 1.7533 13 6 9.1528 1.3520 2.1898 14 6 9.8741 2.3721 2.7812 15 6 9.3033 3.6282 2.9455 16 7 10.0397 4.6598 3.5456 17 6 10.4412 5.8122 2.9328 18 6 10.1701 6.1917 1.4997 19 6 11.1222 6.5519 3.8314 20 6 11.1426 5.8324 5.0431 21 6 11.7927 6.2714 6.3298 22 8 10.7863 6.6941 7.2520 23 14 12.9547 7.6867 5.9870 24 6 10.4689 4.6816 4.8419 25 6 10.2337 3.6042 5.8689 26 6 8.0071 3.8621 2.5156 27 6 3.3756 1.3718 -0.7045 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 3.1167 0.7740 1.8410 32 1 2.2142 2.3477 1.9411 33 1 5.5962 1.2032 0.7688 34 1 7.3041 0.7779 1.2870 35 1 9.6019 0.3777 2.0648 36 1 10.8846 2.1920 3.1171 37 1 9.2301 6.7402 1.4407 38 1 10.9810 6.8196 1.1306 39 1 10.1033 5.2898 0.8914 40 1 11.5694 7.5190 3.6551 41 1 12.3507 5.4385 6.7576 42 1 11.1335 6.9914 8.1042 43 1 14.0246 7.2508 5.0540 44 1 12.2061 8.8286 5.4035 45 1 11.0516 2.8845 5.8343 46 1 10.1858 4.0524 6.8614 47 1 9.2935 3.0963 5.6540 48 1 7.5621 4.8379 2.6421 49 1 3.3385 1.8470 -1.6848 50 1 3.9089 0.4212 -0.7138 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_12335854.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:51 Heat of formation + Delta-G solvation = -0.493052 kcal Electronic energy + Delta-G solvation = -31292.484813 eV Core-core repulsion = 27060.409239 eV Total energy + Delta-G solvation = -4232.075573 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -43.03412 -41.60673 -40.36084 -39.29859 -37.64960 -37.33047 -34.95049 -34.02537 -33.84134 -32.34860 -30.58542 -30.27010 -27.86748 -27.31187 -26.82456 -26.08578 -24.90856 -24.03300 -23.70947 -21.99941 -21.32468 -21.04194 -20.08477 -18.73405 -18.35179 -18.28834 -17.48237 -17.41292 -17.13112 -16.70336 -16.44889 -16.23926 -15.91300 -15.81559 -15.50880 -15.32245 -15.21871 -15.07945 -14.81633 -14.70080 -14.32490 -14.24614 -13.91573 -13.80449 -13.67622 -13.52891 -13.46839 -13.30743 -13.22082 -13.02200 -12.78232 -12.72279 -12.54755 -12.41431 -12.25226 -12.19401 -11.95525 -11.89613 -11.24856 -10.57204 -10.51541 -10.39233 -10.16309 -10.13178 -9.66847 -8.99802 -4.94907 -0.50946 -0.12936 0.93492 1.38044 1.51744 1.55747 1.60033 1.72815 1.91782 2.09565 2.50486 2.88095 3.33971 3.44862 3.49383 3.54825 3.61221 3.70749 3.75030 3.82114 3.83581 3.87331 3.88237 4.05634 4.10465 4.16170 4.23998 4.28747 4.38617 4.44771 4.48294 4.49763 4.52539 4.54091 4.63343 4.64432 4.67079 4.68042 4.82637 4.82830 4.87491 4.90568 4.91218 4.95182 4.97158 4.99040 5.07500 5.07900 5.17274 5.35056 5.48505 5.77759 5.96521 6.21404 6.31730 6.34325 6.98083 7.01674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.394 6.394 3 C 0.061 3.939 4 H 0.102 0.898 5 C -0.167 4.167 6 C 0.120 3.880 7 H 0.105 0.895 8 N -0.695 5.695 9 C 0.559 3.441 10 O -0.580 6.580 11 C -0.133 4.133 12 C -0.062 4.062 13 C -0.097 4.097 14 C -0.081 4.081 15 C 0.094 3.906 16 N -0.404 5.404 17 C 0.017 3.983 18 C -0.082 4.082 19 C -0.218 4.218 20 C -0.181 4.181 21 C -0.039 4.039 22 O -0.568 6.568 23 Si 0.786 3.214 24 C 0.046 3.954 25 C -0.081 4.081 26 C -0.066 4.066 27 C -0.131 4.131 28 H 0.046 0.954 29 H 0.052 0.948 30 H 0.094 0.906 31 H 0.095 0.905 32 H 0.068 0.932 33 H 0.418 0.582 34 H 0.171 0.829 35 H 0.179 0.821 36 H 0.146 0.854 37 H 0.071 0.929 38 H 0.092 0.908 39 H 0.070 0.930 40 H 0.130 0.870 41 H 0.087 0.913 42 H 0.399 0.601 43 H -0.297 1.297 44 H -0.308 1.308 45 H 0.092 0.908 46 H 0.089 0.911 47 H 0.063 0.937 48 H 0.112 0.888 49 H 0.092 0.908 50 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.456 -7.778 -0.144 7.914 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.313 6.313 3 C 0.003 3.997 4 H 0.120 0.880 5 C -0.206 4.206 6 C 0.015 3.985 7 H 0.123 0.877 8 N -0.346 5.346 9 C 0.347 3.653 10 O -0.460 6.460 11 C -0.136 4.136 12 C -0.081 4.081 13 C -0.115 4.115 14 C -0.100 4.100 15 C 0.005 3.995 16 N -0.079 5.079 17 C -0.091 4.091 18 C -0.139 4.139 19 C -0.242 4.242 20 C -0.187 4.187 21 C -0.149 4.149 22 O -0.377 6.377 23 Si 0.694 3.306 24 C -0.064 4.064 25 C -0.138 4.138 26 C -0.086 4.086 27 C -0.169 4.169 28 H 0.064 0.936 29 H 0.071 0.929 30 H 0.112 0.888 31 H 0.114 0.886 32 H 0.086 0.914 33 H 0.257 0.743 34 H 0.188 0.812 35 H 0.197 0.803 36 H 0.164 0.836 37 H 0.090 0.910 38 H 0.111 0.889 39 H 0.089 0.911 40 H 0.147 0.853 41 H 0.105 0.895 42 H 0.249 0.751 43 H -0.225 1.225 44 H -0.237 1.237 45 H 0.110 0.890 46 H 0.108 0.892 47 H 0.082 0.918 48 H 0.130 0.870 49 H 0.110 0.890 50 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 0.971 -7.069 -1.292 7.252 hybrid contribution -0.531 0.242 -0.321 0.666 sum 0.440 -6.827 -1.613 7.029 Atomic orbital electron populations 1.22962 0.79836 1.03762 1.00745 1.87899 1.21149 1.27619 1.94656 1.23540 0.94332 0.85665 0.96195 0.88024 1.24003 0.97436 1.01163 0.98023 1.22227 0.80104 1.00278 0.95897 0.87723 1.45678 1.14634 1.14245 1.60080 1.18467 0.85727 0.84053 0.77043 1.90792 1.71870 1.25818 1.57534 1.19723 0.93931 0.95662 1.04316 1.21824 0.95676 0.94896 0.95673 1.21477 0.93542 1.00245 0.96250 1.21669 1.00953 0.90868 0.96480 1.17689 0.91022 0.89017 1.01812 1.41510 1.42324 1.14746 1.09302 1.20702 1.03552 0.87753 0.97143 1.20365 1.03198 1.02248 0.88125 1.20659 1.08223 1.00931 0.94378 1.18996 1.08098 0.96185 0.95398 1.24087 0.95654 1.06853 0.88331 1.86483 1.35249 1.86996 1.29002 0.94969 0.75150 0.74912 0.85580 1.20731 1.01597 0.99475 0.84591 1.20405 1.02532 0.94931 0.95915 1.21099 0.92081 0.99419 0.96015 1.23573 0.94899 1.00261 0.98191 0.93566 0.92933 0.88784 0.88635 0.91356 0.74303 0.81201 0.80333 0.83616 0.91048 0.88940 0.91141 0.85267 0.89495 0.75073 1.22520 1.23675 0.88957 0.89216 0.91823 0.86991 0.88959 0.87444 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.39 -0.61 10.71 -148.98 -1.60 -2.20 16 3 C 0.06 -0.10 4.31 31.12 0.13 0.03 16 4 H 0.10 -0.38 7.87 -2.39 -0.02 -0.40 16 5 C -0.17 0.09 7.71 31.12 0.24 0.33 16 6 C 0.12 -0.08 4.24 45.52 0.19 0.11 16 7 H 0.10 0.32 7.46 -2.39 -0.02 0.30 16 8 N -0.69 1.13 5.31 -442.89 -2.35 -1.22 16 9 C 0.56 3.16 7.77 86.79 0.67 3.83 16 10 O -0.58 -8.84 15.94 -3.88 -0.06 -8.91 16 11 C -0.13 -0.29 5.87 -20.10 -0.12 -0.41 16 12 C -0.06 0.38 9.54 22.54 0.21 0.59 16 13 C -0.10 0.69 10.02 22.21 0.22 0.92 16 14 C -0.08 0.13 9.73 22.44 0.22 0.35 16 15 C 0.09 0.46 4.65 38.04 0.18 0.64 16 16 N -0.40 -3.67 2.79 -320.36 -0.89 -4.56 16 17 C 0.02 0.19 6.81 41.05 0.28 0.47 16 18 C -0.08 -0.48 9.93 71.24 0.71 0.23 16 19 C -0.22 -2.81 9.27 22.15 0.21 -2.60 16 20 C -0.18 -1.97 5.39 -19.98 -0.11 -2.08 16 21 C -0.04 -0.17 2.49 71.24 0.18 0.01 16 22 O -0.57 -2.49 12.86 -148.98 -1.92 -4.41 16 23 Si 0.79 2.38 30.84 68.60 2.12 4.49 16 24 C 0.05 0.41 6.81 41.04 0.28 0.69 16 25 C -0.08 -0.20 9.73 71.24 0.69 0.49 16 26 C -0.07 -0.46 9.26 22.65 0.21 -0.25 16 27 C -0.13 0.55 7.66 31.12 0.24 0.79 16 28 H 0.05 -0.15 8.14 -2.38 -0.02 -0.17 16 29 H 0.05 -0.23 8.14 -2.39 -0.02 -0.25 16 30 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 31 H 0.10 -0.05 8.14 -2.39 -0.02 -0.07 16 32 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 33 H 0.42 -3.59 6.76 -92.71 -0.63 -4.21 16 34 H 0.17 -2.32 6.40 -2.91 -0.02 -2.34 16 35 H 0.18 -2.51 8.06 -2.91 -0.02 -2.53 16 36 H 0.15 -0.55 8.06 -2.91 -0.02 -0.57 16 37 H 0.07 0.44 8.14 -2.39 -0.02 0.42 16 38 H 0.09 0.29 8.14 -2.39 -0.02 0.27 16 39 H 0.07 0.30 7.83 -2.39 -0.02 0.29 16 40 H 0.13 1.65 6.55 -2.91 -0.02 1.63 16 41 H 0.09 -0.05 7.96 -2.39 -0.02 -0.06 16 42 H 0.40 -2.74 8.74 -74.06 -0.65 -3.39 16 43 H -0.30 -2.67 7.11 99.48 0.71 -1.97 16 44 H -0.31 -3.58 7.06 99.48 0.70 -2.88 16 45 H 0.09 -0.18 8.14 -2.39 -0.02 -0.19 16 46 H 0.09 0.22 7.87 -2.39 -0.02 0.20 16 47 H 0.06 0.16 7.83 -2.38 -0.02 0.14 16 48 H 0.11 1.41 7.65 -2.91 -0.02 1.39 16 49 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 50 H 0.11 -0.64 8.12 -2.38 -0.02 -0.66 16 Total: 0.00 -28.31 415.10 0.89 -27.42 By element: Atomic # 1 Polarization: -15.64 SS G_CDS: -0.28 Total: -15.92 kcal Atomic # 6 Polarization: -0.56 SS G_CDS: 5.87 Total: 5.31 kcal Atomic # 7 Polarization: -2.54 SS G_CDS: -3.24 Total: -5.78 kcal Atomic # 8 Polarization: -11.95 SS G_CDS: -3.57 Total: -15.52 kcal Atomic # 14 Polarization: 2.38 SS G_CDS: 2.12 Total: 4.49 kcal Total: -28.31 0.89 -27.42 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12335854.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.931 kcal (2) G-P(sol) polarization free energy of solvation -28.315 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.383 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.890 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.424 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.493 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds