Wall clock time and date at job start Mon Mar 8 2021 04:08:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42907 * 114.00508 * 2 1 4 4 H 1.08997 * 112.84264 * 341.19675 * 3 2 1 5 5 C 1.53948 * 113.74199 * 112.40203 * 3 2 1 6 6 C 1.53783 * 87.01575 * 139.94730 * 5 3 2 7 7 H 1.08993 * 113.61533 * 89.23185 * 6 5 3 8 8 N 1.46505 * 113.61364 * 220.04788 * 6 5 3 9 9 C 1.34784 * 119.99736 * 254.14101 * 8 6 5 10 10 O 1.21584 * 120.00167 * 359.97438 * 9 8 6 11 11 C 1.47575 * 119.99621 * 179.97438 * 9 8 6 12 12 C 1.40205 * 120.19060 * 179.97438 * 11 9 8 13 13 N 1.39668 * 120.15314 * 359.97438 * 12 11 9 14 14 C 1.36650 * 125.68225 * 269.97578 * 13 12 11 15 15 C 1.50700 * 125.90047 * 359.97438 * 14 13 12 16 16 C 1.34810 * 108.19478 * 180.02562 * 14 13 12 17 17 C 1.40990 * 107.48306 * 359.97438 * 16 14 13 18 18 C 1.50703 * 126.25438 * 179.97438 * 17 16 14 19 19 O 1.42896 * 109.47055 * 105.02479 * 18 17 16 20 20 Si 1.86304 * 109.46911 * 345.02371 * 18 17 16 21 21 C 1.34802 * 107.48836 * 0.24273 * 17 16 14 22 22 C 1.50706 * 125.90491 * 179.72794 * 21 17 16 23 23 C 1.38759 * 119.68972 * 180.25496 * 12 11 9 24 24 C 1.38069 * 120.07183 * 359.42093 * 23 12 11 25 25 C 1.38529 * 120.39570 * 0.60524 * 24 23 12 26 26 C 1.37835 * 120.30858 * 359.67731 * 25 24 23 27 27 C 1.53776 * 87.17468 * 334.63832 * 6 5 3 28 28 H 1.08993 * 109.47686 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.46935 * 300.00109 * 1 2 3 30 30 H 1.09000 * 109.46927 * 59.99479 * 1 2 3 31 31 H 1.08997 * 113.61698 * 25.42510 * 5 3 2 32 32 H 1.08998 * 113.66549 * 254.47185 * 5 3 2 33 33 H 0.96994 * 120.00061 * 74.13013 * 8 6 5 34 34 H 1.09003 * 109.47563 * 269.97477 * 15 14 13 35 35 H 1.08998 * 109.47550 * 29.98218 * 15 14 13 36 36 H 1.09009 * 109.46803 * 149.97772 * 15 14 13 37 37 H 1.07994 * 126.25401 * 180.02562 * 16 14 13 38 38 H 1.09002 * 109.47152 * 225.02287 * 18 17 16 39 39 H 0.96708 * 114.00101 * 299.99358 * 19 18 17 40 40 H 1.48501 * 109.99652 * 179.97438 * 20 18 17 41 41 H 1.48494 * 110.00064 * 301.31786 * 20 18 17 42 42 H 1.09001 * 109.47057 * 90.02194 * 22 21 17 43 43 H 1.08992 * 109.46895 * 210.02646 * 22 21 17 44 44 H 1.09000 * 109.46828 * 330.02192 * 22 21 17 45 45 H 1.07999 * 119.96691 * 179.72590 * 23 12 11 46 46 H 1.08001 * 119.80247 * 180.29876 * 24 23 12 47 47 H 1.07999 * 119.84618 * 179.69622 * 25 24 23 48 48 H 1.07995 * 120.04156 * 180.02562 * 26 25 24 49 49 H 1.08993 * 113.61587 * 139.94396 * 27 6 5 50 50 H 1.09007 * 113.61321 * 270.76145 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 1 1.3138 2.0788 -0.3238 5 6 2.7531 1.6532 1.3028 6 6 3.8221 2.3198 0.4209 7 1 3.6223 3.3706 0.2117 8 7 5.1930 2.0817 0.8794 9 6 5.8831 3.0700 1.4824 10 8 5.3680 4.1592 1.6456 11 6 7.2639 2.8300 1.9448 12 6 7.9856 3.8553 2.5721 13 7 7.4014 5.1096 2.7622 14 6 7.4564 6.1557 1.8849 15 6 8.1564 6.1539 0.5503 16 6 6.7773 7.1901 2.4200 17 6 6.2837 6.7702 3.6722 18 6 5.4643 7.5966 4.6297 19 8 4.1019 7.1681 4.5833 20 14 5.5674 9.3926 4.1452 21 6 6.6838 5.4966 3.8589 22 6 6.3888 4.6457 5.0673 23 6 9.2851 3.6198 2.9980 24 6 9.8588 2.3774 2.8147 25 6 9.1488 1.3621 2.1948 26 6 7.8591 1.5801 1.7603 27 6 3.3756 1.3718 -0.7046 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8899 31 1 3.1164 0.7801 1.8447 32 1 2.2139 2.3540 1.9402 33 1 5.6040 1.2128 0.7490 34 1 9.1862 6.4870 0.6796 35 1 8.1499 5.1450 0.1379 36 1 7.6393 6.8286 -0.1321 37 1 6.6363 8.1621 1.9711 38 1 5.8507 7.4703 5.6411 39 1 3.6925 7.2524 3.7112 40 1 4.7629 10.2181 5.0815 41 1 6.9826 9.8419 4.1587 42 1 5.4559 4.1040 4.9113 43 1 7.2010 3.9348 5.2181 44 1 6.2960 5.2832 5.9466 45 1 9.8467 4.4077 3.4777 46 1 10.8688 2.1974 3.1521 47 1 9.6080 0.3951 2.0516 48 1 7.3094 0.7854 1.2780 49 1 3.3382 1.8457 -1.6854 50 1 3.9105 0.4221 -0.7135 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_12335856.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:56 Heat of formation + Delta-G solvation = 7.788747 kcal Electronic energy + Delta-G solvation = -33110.602501 eV Core-core repulsion = 28878.886054 eV Total energy + Delta-G solvation = -4231.716448 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -42.72712 -41.26149 -40.24170 -39.13830 -37.41483 -37.21852 -34.55381 -33.97529 -33.38436 -32.23255 -30.36061 -29.95273 -27.91051 -27.05168 -26.83364 -25.83636 -24.46071 -24.35096 -23.36048 -21.69015 -21.28305 -20.72308 -20.09119 -18.83316 -18.26254 -17.69578 -17.22371 -17.12058 -16.77798 -16.41140 -16.28803 -16.04536 -15.87308 -15.65865 -15.60954 -15.09928 -14.91763 -14.76608 -14.60958 -14.43078 -14.14978 -13.98022 -13.76423 -13.68643 -13.56960 -13.37053 -13.31513 -13.17442 -13.06671 -12.82863 -12.82111 -12.49785 -12.47131 -12.22095 -12.18476 -11.90020 -11.78701 -11.48835 -10.84683 -10.52396 -10.33563 -10.23834 -10.03376 -9.96990 -9.31429 -8.42963 -4.72681 -0.47493 -0.08081 1.43770 1.67408 1.75866 1.90431 1.96435 2.06570 2.21233 2.26916 2.54477 2.84678 3.33050 3.47562 3.49686 3.52003 3.73364 3.75977 3.79992 3.86963 3.91817 4.03449 4.07941 4.22445 4.23930 4.34674 4.40211 4.42511 4.48326 4.53605 4.54872 4.61050 4.63095 4.64284 4.73013 4.75695 4.77307 4.85812 4.86812 4.92471 4.93686 4.95982 4.98896 5.06441 5.09517 5.12331 5.18123 5.42398 5.45675 5.48643 5.67875 6.18055 6.35428 6.40920 6.49546 6.78278 6.97876 7.17877 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.065 3.935 4 H 0.093 0.907 5 C -0.168 4.168 6 C 0.129 3.871 7 H 0.120 0.880 8 N -0.715 5.715 9 C 0.550 3.450 10 O -0.498 6.498 11 C -0.126 4.126 12 C 0.172 3.828 13 N -0.395 5.395 14 C 0.043 3.957 15 C -0.082 4.082 16 C -0.185 4.185 17 C -0.195 4.195 18 C -0.029 4.029 19 O -0.547 6.547 20 Si 0.694 3.306 21 C 0.071 3.929 22 C -0.081 4.081 23 C -0.114 4.114 24 C -0.084 4.084 25 C -0.113 4.113 26 C -0.082 4.082 27 C -0.144 4.144 28 H 0.087 0.913 29 H 0.043 0.957 30 H 0.044 0.956 31 H 0.093 0.907 32 H 0.077 0.923 33 H 0.399 0.601 34 H 0.068 0.932 35 H 0.056 0.944 36 H 0.081 0.919 37 H 0.140 0.860 38 H 0.100 0.900 39 H 0.377 0.623 40 H -0.263 1.263 41 H -0.260 1.260 42 H 0.071 0.929 43 H 0.055 0.945 44 H 0.078 0.922 45 H 0.137 0.863 46 H 0.138 0.862 47 H 0.138 0.862 48 H 0.134 0.866 49 H 0.082 0.918 50 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.656 -4.567 -4.100 6.357 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.006 3.994 4 H 0.111 0.889 5 C -0.207 4.207 6 C 0.024 3.976 7 H 0.138 0.862 8 N -0.368 5.368 9 C 0.336 3.664 10 O -0.373 6.373 11 C -0.130 4.130 12 C 0.081 3.919 13 N -0.070 5.070 14 C -0.065 4.065 15 C -0.139 4.139 16 C -0.209 4.209 17 C -0.201 4.201 18 C -0.141 4.141 19 O -0.352 6.352 20 Si 0.597 3.403 21 C -0.038 4.038 22 C -0.139 4.139 23 C -0.133 4.133 24 C -0.102 4.102 25 C -0.131 4.131 26 C -0.101 4.101 27 C -0.182 4.182 28 H 0.105 0.895 29 H 0.062 0.938 30 H 0.062 0.938 31 H 0.111 0.889 32 H 0.095 0.905 33 H 0.235 0.765 34 H 0.087 0.913 35 H 0.075 0.925 36 H 0.099 0.901 37 H 0.157 0.843 38 H 0.118 0.882 39 H 0.224 0.776 40 H -0.188 1.188 41 H -0.185 1.185 42 H 0.089 0.911 43 H 0.074 0.926 44 H 0.097 0.903 45 H 0.155 0.845 46 H 0.156 0.844 47 H 0.156 0.844 48 H 0.152 0.848 49 H 0.101 0.899 50 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 1.867 -3.508 -3.164 5.079 hybrid contribution 0.274 -0.975 0.194 1.031 sum 2.141 -4.483 -2.971 5.788 Atomic orbital electron populations 1.22831 0.80698 1.03065 1.00190 1.87933 1.20055 1.26868 1.94557 1.23475 0.93701 0.85795 0.96436 0.88915 1.24038 0.97474 1.01378 0.97785 1.22183 0.80151 1.00515 0.94765 0.86244 1.45812 1.15002 1.15005 1.60990 1.18111 0.85178 0.84675 0.78405 1.90920 1.69546 1.23099 1.53697 1.20233 0.95150 0.94615 1.03039 1.17507 0.91884 0.84446 0.98052 1.40941 1.42346 1.07798 1.15956 1.20098 1.05433 0.87083 0.93915 1.20266 0.99587 1.02460 0.91603 1.20377 1.05235 0.98705 0.96546 1.19443 1.07549 0.95011 0.98137 1.24272 0.82645 1.07697 0.99510 1.86431 1.23642 1.88874 1.36229 0.94604 0.81889 0.74956 0.88900 1.19957 0.99219 0.94904 0.89699 1.20258 1.01470 0.98412 0.93717 1.21386 0.93557 0.98391 0.99974 1.21342 1.00410 0.92014 0.96464 1.21288 0.94169 0.99985 0.97684 1.21299 0.95519 0.95161 0.98090 1.23616 0.95779 1.00312 0.98491 0.89469 0.93814 0.93776 0.88874 0.90470 0.76524 0.91346 0.92488 0.90065 0.84258 0.88215 0.77637 1.18810 1.18498 0.91055 0.92577 0.90343 0.84545 0.84378 0.84422 0.84820 0.89912 0.88580 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.47 10.72 -35.23 -0.38 -0.85 16 3 C 0.06 -0.03 4.31 -25.83 -0.11 -0.15 16 4 H 0.09 -0.15 7.87 -51.93 -0.41 -0.56 16 5 C -0.17 0.02 7.73 -25.83 -0.20 -0.18 16 6 C 0.13 -0.05 4.21 -67.12 -0.28 -0.34 16 7 H 0.12 0.10 7.50 -51.93 -0.39 -0.29 16 8 N -0.72 0.35 5.31 -54.04 -0.29 0.06 16 9 C 0.55 1.24 7.77 -12.45 -0.10 1.14 16 10 O -0.50 -2.70 13.32 5.29 0.07 -2.63 16 11 C -0.13 -0.13 5.89 -104.82 -0.62 -0.74 16 12 C 0.17 0.33 4.52 -83.36 -0.38 -0.04 16 13 N -0.40 -1.43 1.44 -52.35 -0.08 -1.51 16 14 C 0.04 0.15 6.01 -81.66 -0.49 -0.34 16 15 C -0.08 -0.10 10.09 36.01 0.36 0.26 16 16 C -0.18 -0.66 9.27 -39.76 -0.37 -1.03 16 17 C -0.19 -0.82 5.35 -104.80 -0.56 -1.38 16 18 C -0.03 -0.10 2.60 36.01 0.09 0.00 16 19 O -0.55 -2.10 12.88 -35.23 -0.45 -2.55 16 20 Si 0.69 1.38 30.81 -169.99 -5.24 -3.86 16 21 C 0.07 0.32 6.02 -81.66 -0.49 -0.17 16 22 C -0.08 -0.26 9.87 36.01 0.36 0.10 16 23 C -0.11 0.00 9.96 -39.45 -0.39 -0.39 16 24 C -0.08 0.17 10.03 -39.54 -0.40 -0.23 16 25 C -0.11 0.30 10.02 -39.62 -0.40 -0.10 16 26 C -0.08 0.15 9.54 -39.20 -0.37 -0.22 16 27 C -0.14 0.22 7.66 -25.92 -0.20 0.02 16 28 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 29 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 30 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.09 0.04 8.14 -51.93 -0.42 -0.39 16 32 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 33 H 0.40 -1.14 6.74 -40.82 -0.28 -1.42 16 34 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 35 H 0.06 0.09 7.83 -51.93 -0.41 -0.32 16 36 H 0.08 0.02 8.14 -51.92 -0.42 -0.40 16 37 H 0.14 0.21 6.59 -52.49 -0.35 -0.14 16 38 H 0.10 0.35 7.49 -51.93 -0.39 -0.04 16 39 H 0.38 0.34 8.70 45.56 0.40 0.73 16 40 H -0.26 -1.24 7.11 56.52 0.40 -0.84 16 41 H -0.26 -1.15 7.11 56.52 0.40 -0.75 16 42 H 0.07 0.28 8.14 -51.93 -0.42 -0.14 16 43 H 0.06 0.12 7.84 -51.93 -0.41 -0.28 16 44 H 0.08 0.20 7.49 -51.93 -0.39 -0.19 16 45 H 0.14 -0.06 8.06 -52.49 -0.42 -0.48 16 46 H 0.14 -0.58 8.06 -52.49 -0.42 -1.00 16 47 H 0.14 -0.68 8.06 -52.49 -0.42 -1.10 16 48 H 0.13 -0.59 6.40 -52.49 -0.34 -0.93 16 49 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 50 H 0.10 -0.17 8.11 -51.93 -0.42 -0.59 16 LS Contribution 410.39 15.07 6.18 6.18 Total: 0.00 -8.67 410.39 -11.26 -19.94 By element: Atomic # 1 Polarization: -4.42 SS G_CDS: -7.64 Total: -12.06 kcal Atomic # 6 Polarization: 0.72 SS G_CDS: -3.45 Total: -2.73 kcal Atomic # 7 Polarization: -1.08 SS G_CDS: -0.36 Total: -1.45 kcal Atomic # 8 Polarization: -5.27 SS G_CDS: -0.76 Total: -6.03 kcal Atomic # 14 Polarization: 1.38 SS G_CDS: -5.24 Total: -3.86 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -8.67 -11.26 -19.94 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12335856.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.724 kcal (2) G-P(sol) polarization free energy of solvation -8.671 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.053 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.935 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.789 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds