Wall clock time and date at job start Mon Mar 8 2021 04:08:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42907 * 114.00508 * 2 1 4 4 H 1.08997 * 112.84264 * 341.19675 * 3 2 1 5 5 C 1.53948 * 113.74199 * 112.40203 * 3 2 1 6 6 C 1.53783 * 87.01575 * 139.94730 * 5 3 2 7 7 H 1.08993 * 113.61533 * 89.23185 * 6 5 3 8 8 N 1.46505 * 113.61364 * 220.04788 * 6 5 3 9 9 C 1.34784 * 119.99736 * 254.14101 * 8 6 5 10 10 O 1.21584 * 120.00167 * 359.97438 * 9 8 6 11 11 C 1.47575 * 119.99621 * 179.97438 * 9 8 6 12 12 C 1.40205 * 120.19060 * 179.97438 * 11 9 8 13 13 N 1.39668 * 120.15314 * 359.97438 * 12 11 9 14 14 C 1.36650 * 125.68225 * 269.97578 * 13 12 11 15 15 C 1.50700 * 125.90047 * 359.97438 * 14 13 12 16 16 C 1.34810 * 108.19478 * 180.02562 * 14 13 12 17 17 C 1.40990 * 107.48306 * 359.97438 * 16 14 13 18 18 C 1.50703 * 126.25438 * 179.97438 * 17 16 14 19 19 O 1.42896 * 109.47055 * 105.02479 * 18 17 16 20 20 Si 1.86304 * 109.46911 * 345.02371 * 18 17 16 21 21 C 1.34802 * 107.48836 * 0.24273 * 17 16 14 22 22 C 1.50706 * 125.90491 * 179.72794 * 21 17 16 23 23 C 1.38759 * 119.68972 * 180.25496 * 12 11 9 24 24 C 1.38069 * 120.07183 * 359.42093 * 23 12 11 25 25 C 1.38529 * 120.39570 * 0.60524 * 24 23 12 26 26 C 1.37835 * 120.30858 * 359.67731 * 25 24 23 27 27 C 1.53776 * 87.17468 * 334.63832 * 6 5 3 28 28 H 1.08993 * 109.47686 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.46935 * 300.00109 * 1 2 3 30 30 H 1.09000 * 109.46927 * 59.99479 * 1 2 3 31 31 H 1.08997 * 113.61698 * 25.42510 * 5 3 2 32 32 H 1.08998 * 113.66549 * 254.47185 * 5 3 2 33 33 H 0.96994 * 120.00061 * 74.13013 * 8 6 5 34 34 H 1.09003 * 109.47563 * 269.97477 * 15 14 13 35 35 H 1.08998 * 109.47550 * 29.98218 * 15 14 13 36 36 H 1.09009 * 109.46803 * 149.97772 * 15 14 13 37 37 H 1.07994 * 126.25401 * 180.02562 * 16 14 13 38 38 H 1.09002 * 109.47152 * 225.02287 * 18 17 16 39 39 H 0.96708 * 114.00101 * 299.99358 * 19 18 17 40 40 H 1.48501 * 109.99652 * 179.97438 * 20 18 17 41 41 H 1.48494 * 110.00064 * 301.31786 * 20 18 17 42 42 H 1.09001 * 109.47057 * 90.02194 * 22 21 17 43 43 H 1.08992 * 109.46895 * 210.02646 * 22 21 17 44 44 H 1.09000 * 109.46828 * 330.02192 * 22 21 17 45 45 H 1.07999 * 119.96691 * 179.72590 * 23 12 11 46 46 H 1.08001 * 119.80247 * 180.29876 * 24 23 12 47 47 H 1.07999 * 119.84618 * 179.69622 * 25 24 23 48 48 H 1.07995 * 120.04156 * 180.02562 * 26 25 24 49 49 H 1.08993 * 113.61587 * 139.94396 * 27 6 5 50 50 H 1.09007 * 113.61321 * 270.76145 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 1 1.3138 2.0788 -0.3238 5 6 2.7531 1.6532 1.3028 6 6 3.8221 2.3198 0.4209 7 1 3.6223 3.3706 0.2117 8 7 5.1930 2.0817 0.8794 9 6 5.8831 3.0700 1.4824 10 8 5.3680 4.1592 1.6456 11 6 7.2639 2.8300 1.9448 12 6 7.9856 3.8553 2.5721 13 7 7.4014 5.1096 2.7622 14 6 7.4564 6.1557 1.8849 15 6 8.1564 6.1539 0.5503 16 6 6.7773 7.1901 2.4200 17 6 6.2837 6.7702 3.6722 18 6 5.4643 7.5966 4.6297 19 8 4.1019 7.1681 4.5833 20 14 5.5674 9.3926 4.1452 21 6 6.6838 5.4966 3.8589 22 6 6.3888 4.6457 5.0673 23 6 9.2851 3.6198 2.9980 24 6 9.8588 2.3774 2.8147 25 6 9.1488 1.3621 2.1948 26 6 7.8591 1.5801 1.7603 27 6 3.3756 1.3718 -0.7046 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8899 31 1 3.1164 0.7801 1.8447 32 1 2.2139 2.3540 1.9402 33 1 5.6040 1.2128 0.7490 34 1 9.1862 6.4870 0.6796 35 1 8.1499 5.1450 0.1379 36 1 7.6393 6.8286 -0.1321 37 1 6.6363 8.1621 1.9711 38 1 5.8507 7.4703 5.6411 39 1 3.6925 7.2524 3.7112 40 1 4.7629 10.2181 5.0815 41 1 6.9826 9.8419 4.1587 42 1 5.4559 4.1040 4.9113 43 1 7.2010 3.9348 5.2181 44 1 6.2960 5.2832 5.9466 45 1 9.8467 4.4077 3.4777 46 1 10.8688 2.1974 3.1521 47 1 9.6080 0.3951 2.0516 48 1 7.3094 0.7854 1.2780 49 1 3.3382 1.8457 -1.6854 50 1 3.9105 0.4221 -0.7135 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_12335856.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:08:55 Heat of formation + Delta-G solvation = 10.946550 kcal Electronic energy + Delta-G solvation = -33110.465569 eV Core-core repulsion = 28878.886054 eV Total energy + Delta-G solvation = -4231.579515 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -42.85418 -41.31249 -40.22081 -39.15774 -37.66092 -37.25489 -34.61066 -34.03837 -33.58119 -32.14506 -30.42003 -30.12191 -27.85126 -27.22731 -26.79721 -25.83700 -24.60427 -24.29518 -23.40395 -21.74109 -21.29651 -20.83883 -20.22258 -18.82888 -18.26694 -17.79433 -17.47414 -17.12536 -16.74204 -16.47170 -16.30090 -16.07070 -15.91943 -15.71723 -15.63497 -15.24214 -15.02538 -14.84758 -14.72272 -14.41753 -14.34711 -14.17481 -13.98822 -13.70965 -13.52043 -13.42462 -13.34320 -13.23978 -13.10984 -12.89219 -12.78227 -12.71580 -12.44794 -12.19406 -12.14773 -12.10771 -11.86779 -11.74472 -10.97802 -10.50430 -10.32880 -10.28949 -10.11288 -9.98589 -9.51358 -8.66732 -4.92933 -0.42247 0.03049 1.22029 1.45021 1.69274 1.74837 1.90063 1.96417 1.97935 2.04202 2.59766 2.90479 3.38470 3.51701 3.57476 3.62382 3.69527 3.76762 3.79236 3.85928 3.95013 4.05044 4.16941 4.19205 4.22794 4.28355 4.32368 4.41471 4.47973 4.51567 4.52738 4.53357 4.65918 4.67732 4.69094 4.69618 4.70478 4.75793 4.83850 4.91731 4.92059 4.93468 4.99390 5.01141 5.06030 5.17569 5.22628 5.27365 5.44422 5.46327 5.62496 6.13876 6.23060 6.28138 6.43059 6.63836 6.82504 7.13228 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.396 6.396 3 C 0.063 3.937 4 H 0.102 0.898 5 C -0.167 4.167 6 C 0.129 3.871 7 H 0.105 0.895 8 N -0.703 5.703 9 C 0.545 3.455 10 O -0.539 6.539 11 C -0.144 4.144 12 C 0.144 3.856 13 N -0.392 5.392 14 C 0.031 3.969 15 C -0.076 4.076 16 C -0.202 4.202 17 C -0.207 4.207 18 C -0.041 4.041 19 O -0.561 6.561 20 Si 0.785 3.215 21 C 0.048 3.952 22 C -0.073 4.073 23 C -0.125 4.125 24 C -0.077 4.077 25 C -0.107 4.107 26 C -0.076 4.076 27 C -0.131 4.131 28 H 0.093 0.907 29 H 0.045 0.955 30 H 0.053 0.947 31 H 0.088 0.912 32 H 0.065 0.935 33 H 0.412 0.588 34 H 0.078 0.922 35 H 0.051 0.949 36 H 0.090 0.910 37 H 0.156 0.844 38 H 0.092 0.908 39 H 0.388 0.612 40 H -0.298 1.298 41 H -0.290 1.290 42 H 0.057 0.943 43 H 0.062 0.938 44 H 0.079 0.921 45 H 0.133 0.867 46 H 0.163 0.837 47 H 0.169 0.831 48 H 0.160 0.840 49 H 0.092 0.908 50 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.677 -6.185 -5.266 8.553 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.314 6.314 3 C 0.004 3.996 4 H 0.120 0.880 5 C -0.206 4.206 6 C 0.024 3.976 7 H 0.123 0.877 8 N -0.356 5.356 9 C 0.332 3.668 10 O -0.416 6.416 11 C -0.149 4.149 12 C 0.054 3.946 13 N -0.066 5.066 14 C -0.078 4.078 15 C -0.134 4.134 16 C -0.226 4.226 17 C -0.214 4.214 18 C -0.151 4.151 19 O -0.369 6.369 20 Si 0.692 3.308 21 C -0.062 4.062 22 C -0.130 4.130 23 C -0.144 4.144 24 C -0.096 4.096 25 C -0.125 4.125 26 C -0.095 4.095 27 C -0.169 4.169 28 H 0.112 0.888 29 H 0.064 0.936 30 H 0.072 0.928 31 H 0.107 0.893 32 H 0.084 0.916 33 H 0.250 0.750 34 H 0.097 0.903 35 H 0.071 0.929 36 H 0.109 0.891 37 H 0.173 0.827 38 H 0.110 0.890 39 H 0.237 0.763 40 H -0.226 1.226 41 H -0.217 1.217 42 H 0.076 0.924 43 H 0.081 0.919 44 H 0.098 0.902 45 H 0.151 0.849 46 H 0.181 0.819 47 H 0.187 0.813 48 H 0.178 0.822 49 H 0.111 0.889 50 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 2.886 -5.196 -4.356 7.368 hybrid contribution -0.021 -0.571 0.579 0.814 sum 2.864 -5.767 -3.776 7.465 Atomic orbital electron populations 1.22956 0.79838 1.03721 1.00764 1.87896 1.21162 1.27727 1.94652 1.23569 0.94301 0.85582 0.96127 0.87987 1.24000 0.97711 1.00911 0.97973 1.22096 0.80112 1.00007 0.95357 0.87748 1.45718 1.14776 1.15110 1.59974 1.18424 0.85790 0.84481 0.78073 1.90894 1.70527 1.24732 1.55494 1.20257 0.94658 0.95749 1.04190 1.17816 0.92874 0.84165 0.99758 1.41024 1.41748 1.08452 1.15422 1.20548 1.05333 0.87236 0.94660 1.20283 1.00047 1.02436 0.90618 1.20648 1.05657 0.99667 0.96584 1.19619 1.07834 0.95308 0.98628 1.24507 0.82344 1.09077 0.99186 1.86388 1.23971 1.89132 1.37362 0.93462 0.78444 0.71768 0.87156 1.20201 1.00090 0.95398 0.90501 1.20164 1.00964 0.98316 0.93577 1.21465 0.92991 0.99475 1.00453 1.21678 1.01387 0.91086 0.95416 1.21683 0.93603 1.00991 0.96187 1.21629 0.96051 0.94476 0.97324 1.23546 0.94898 1.00175 0.98316 0.88846 0.93623 0.92835 0.89298 0.91593 0.75020 0.90304 0.92948 0.89139 0.82704 0.89011 0.76341 1.22614 1.21740 0.92414 0.91870 0.90248 0.84872 0.81943 0.81327 0.82231 0.88947 0.87887 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.40 -0.95 10.72 -148.98 -1.60 -2.55 16 3 C 0.06 -0.06 4.31 31.18 0.13 0.08 16 4 H 0.10 -0.32 7.87 -2.39 -0.02 -0.34 16 5 C -0.17 -0.11 7.73 31.18 0.24 0.13 16 6 C 0.13 -0.02 4.21 45.52 0.19 0.17 16 7 H 0.10 0.34 7.50 -2.39 -0.02 0.33 16 8 N -0.70 0.50 5.31 -443.16 -2.35 -1.86 16 9 C 0.55 3.03 7.77 86.71 0.67 3.71 16 10 O -0.54 -6.99 13.32 -3.98 -0.05 -7.05 16 11 C -0.14 -0.34 5.89 -19.99 -0.12 -0.46 16 12 C 0.14 0.69 4.52 38.50 0.17 0.86 16 13 N -0.39 -3.50 1.44 -319.53 -0.46 -3.95 16 14 C 0.03 0.27 6.01 41.02 0.25 0.51 16 15 C -0.08 -0.24 10.09 71.24 0.72 0.48 16 16 C -0.20 -1.75 9.27 22.16 0.21 -1.54 16 17 C -0.21 -2.15 5.35 -19.98 -0.11 -2.26 16 18 C -0.04 -0.34 2.60 71.24 0.19 -0.16 16 19 O -0.56 -5.32 12.88 -148.98 -1.92 -7.24 16 20 Si 0.79 3.99 30.81 68.60 2.11 6.10 16 21 C 0.05 0.53 6.02 41.02 0.25 0.78 16 22 C -0.07 -0.62 9.87 71.24 0.70 0.08 16 23 C -0.12 -0.03 9.96 22.35 0.22 0.20 16 24 C -0.08 0.44 10.03 22.30 0.22 0.66 16 25 C -0.11 0.82 10.02 22.24 0.22 1.05 16 26 C -0.08 0.39 9.54 22.52 0.21 0.60 16 27 C -0.13 0.45 7.66 31.12 0.24 0.69 16 28 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 29 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 30 H 0.05 -0.21 8.14 -2.39 -0.02 -0.23 16 31 H 0.09 0.13 8.14 -2.39 -0.02 0.11 16 32 H 0.07 0.18 8.14 -2.39 -0.02 0.16 16 33 H 0.41 -2.68 6.74 -92.71 -0.63 -3.30 16 34 H 0.08 0.06 8.14 -2.39 -0.02 0.04 16 35 H 0.05 0.21 7.83 -2.39 -0.02 0.19 16 36 H 0.09 0.08 8.14 -2.38 -0.02 0.06 16 37 H 0.16 0.59 6.59 -2.91 -0.02 0.58 16 38 H 0.09 0.85 7.49 -2.39 -0.02 0.83 16 39 H 0.39 1.34 8.70 -74.05 -0.64 0.70 16 40 H -0.30 -3.23 7.11 99.48 0.71 -2.53 16 41 H -0.29 -2.92 7.11 99.48 0.71 -2.21 16 42 H 0.06 0.62 8.14 -2.39 -0.02 0.60 16 43 H 0.06 0.40 7.84 -2.39 -0.02 0.38 16 44 H 0.08 0.59 7.49 -2.39 -0.02 0.58 16 45 H 0.13 0.01 8.06 -2.91 -0.02 -0.02 16 46 H 0.16 -1.76 8.06 -2.91 -0.02 -1.79 16 47 H 0.17 -2.32 8.06 -2.91 -0.02 -2.34 16 48 H 0.16 -1.79 6.40 -2.91 -0.02 -1.81 16 49 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 50 H 0.10 -0.47 8.11 -2.38 -0.02 -0.49 16 Total: 0.00 -22.56 410.39 1.31 -21.25 By element: Atomic # 1 Polarization: -11.19 SS G_CDS: -0.27 Total: -11.46 kcal Atomic # 6 Polarization: 0.92 SS G_CDS: 5.85 Total: 6.76 kcal Atomic # 7 Polarization: -3.00 SS G_CDS: -2.81 Total: -5.81 kcal Atomic # 8 Polarization: -13.27 SS G_CDS: -3.57 Total: -16.84 kcal Atomic # 14 Polarization: 3.99 SS G_CDS: 2.11 Total: 6.10 kcal Total: -22.56 1.31 -21.25 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12335856.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.192 kcal (2) G-P(sol) polarization free energy of solvation -22.557 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.635 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.312 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.245 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.947 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds