Wall clock time and date at job start Mon Mar 8 2021 04:09:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52997 * 109.46864 * 2 1 4 4 C 1.53001 * 109.47286 * 294.99831 * 3 2 1 5 5 C 1.53002 * 109.46793 * 174.99805 * 3 2 1 6 6 C 1.50702 * 109.46792 * 184.58103 * 5 3 2 7 7 O 1.21281 * 120.00288 * 37.71982 * 6 5 3 8 8 N 1.34775 * 120.00184 * 217.71216 * 6 5 3 9 9 C 1.46500 * 120.00473 * 175.17576 * 8 6 5 10 10 H 1.09005 * 112.84438 * 23.79857 * 9 8 6 11 11 C 1.53780 * 113.62066 * 154.99997 * 9 8 6 12 12 C 1.53775 * 87.08079 * 139.97888 * 11 9 8 13 13 H 1.09004 * 113.61498 * 89.20342 * 12 11 9 14 14 O 1.42903 * 113.61352 * 220.01786 * 12 11 9 15 15 C 1.42902 * 114.00054 * 209.99944 * 14 12 11 16 16 C 1.53783 * 113.60909 * 252.50058 * 9 8 6 17 17 N 1.46491 * 109.47515 * 304.58436 * 5 3 2 18 18 C 1.36341 * 125.63842 * 299.69773 * 17 5 3 19 19 C 1.34852 * 108.21865 * 179.83033 * 18 17 5 20 20 C 1.40885 * 107.41867 * 0.42119 * 19 18 17 21 21 C 1.34849 * 107.41835 * 359.73621 * 20 19 18 22 22 C 1.50697 * 125.89512 * 180.02562 * 21 20 19 23 23 O 1.42893 * 109.47612 * 209.97749 * 22 21 20 24 24 Si 1.86304 * 109.47014 * 329.97926 * 22 21 20 25 25 H 1.09001 * 109.46944 * 179.97438 * 1 2 3 26 26 H 1.09002 * 109.47250 * 299.99433 * 1 2 3 27 27 H 1.09000 * 109.47486 * 60.00063 * 1 2 3 28 28 H 1.09002 * 109.46968 * 239.99838 * 2 1 3 29 29 H 1.09001 * 109.46966 * 120.00014 * 2 1 3 30 30 H 1.08999 * 109.47421 * 55.00410 * 3 2 1 31 31 H 1.08997 * 109.46986 * 180.72642 * 4 3 2 32 32 H 1.08993 * 109.47039 * 300.73094 * 4 3 2 33 33 H 1.09005 * 109.46598 * 60.72730 * 4 3 2 34 34 H 1.09005 * 109.46750 * 64.59070 * 5 3 2 35 35 H 0.97011 * 119.99949 * 355.16993 * 8 6 5 36 36 H 1.09004 * 113.61178 * 25.42715 * 11 9 8 37 37 H 1.08996 * 113.69043 * 254.53912 * 11 9 8 38 38 H 1.08995 * 109.46741 * 60.00374 * 15 14 12 39 39 H 1.08993 * 109.47278 * 300.00361 * 15 14 12 40 40 H 1.09002 * 109.46864 * 180.02562 * 15 14 12 41 41 H 1.08998 * 113.61592 * 105.46945 * 16 9 8 42 42 H 1.08997 * 113.61945 * 334.55980 * 16 9 8 43 43 H 1.07999 * 125.88914 * 359.97438 * 18 17 5 44 44 H 1.08003 * 126.28713 * 180.16296 * 19 18 17 45 45 H 1.08003 * 126.29323 * 179.74146 * 20 19 18 46 46 H 1.08997 * 109.47154 * 89.97666 * 22 21 20 47 47 H 0.96702 * 114.00251 * 59.99611 * 23 22 21 48 48 H 1.48494 * 110.00021 * 58.67718 * 24 22 21 49 49 H 1.48495 * 110.00263 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 1.6352 2.1265 -1.3074 5 6 3.5648 1.4443 0.1258 6 6 4.0577 2.8639 0.2390 7 8 3.4213 3.6781 0.8737 8 7 5.2060 3.2288 -0.3651 9 6 5.6312 4.6305 -0.3446 10 1 5.2064 5.1895 0.4892 11 6 7.1498 4.8161 -0.5006 12 6 6.8307 6.0194 -1.4033 13 1 6.7351 6.9596 -0.8600 14 8 7.6856 6.1221 -2.5438 15 6 7.8965 7.4621 -2.9934 16 6 5.4845 5.3385 -1.7018 17 7 3.9571 0.6943 1.3214 18 6 3.5976 0.9955 2.6016 19 6 4.1476 0.0767 3.4212 20 6 4.8813 -0.8191 2.6186 21 6 4.7469 -0.4170 1.3385 22 6 5.3629 -1.0816 0.1344 23 8 5.6146 -0.1012 -0.8742 24 14 6.9662 -1.8933 0.6254 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5137 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 1.8933 -0.5139 -0.8900 29 1 1.8933 -0.5138 0.8900 30 1 1.6054 1.9815 0.8418 31 1 2.0096 3.1502 -1.3128 32 1 2.0591 1.5800 -2.1497 33 1 0.5484 2.1367 -1.3907 34 1 4.0026 0.9770 -0.7563 35 1 5.7510 2.5631 -0.8133 36 1 7.6385 3.9946 -1.0246 37 1 7.6554 5.0874 0.4261 38 1 8.3544 8.0454 -2.1947 39 1 6.9404 7.9082 -3.2669 40 1 8.5552 7.4544 -3.8618 41 1 4.6445 6.0318 -1.7441 42 1 5.5179 4.6600 -2.5542 43 1 2.9772 1.8253 2.9065 44 1 4.0477 0.0374 4.4959 45 1 5.4472 -1.6713 2.9649 46 1 4.6783 -1.8353 -0.2545 47 1 6.2174 0.6024 -0.5971 48 1 6.7225 -2.8927 1.6964 49 1 7.5841 -2.5519 -0.5534 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_12360566.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:07 Heat of formation + Delta-G solvation = -36.933164 kcal Electronic energy + Delta-G solvation = -29613.590542 eV Core-core repulsion = 25737.301750 eV Total energy + Delta-G solvation = -3876.288792 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.193 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.77170 -41.19172 -39.93509 -38.02865 -37.73744 -37.11446 -34.38757 -33.24761 -31.09213 -30.80903 -28.15283 -27.55698 -26.87831 -26.09390 -25.74424 -24.37833 -22.07947 -21.86806 -21.30479 -20.90790 -20.22547 -18.86479 -18.33373 -18.21919 -17.26579 -17.00329 -16.71671 -16.29970 -16.24464 -16.05627 -15.60155 -15.50959 -15.21726 -15.02508 -14.85409 -14.75134 -14.32946 -14.12413 -14.07194 -13.61288 -13.58174 -13.32868 -13.22493 -13.18725 -13.01238 -12.87166 -12.61541 -12.31562 -12.25180 -12.23389 -11.98377 -11.95255 -11.92967 -11.70188 -11.60718 -11.12466 -10.67473 -10.55890 -10.18388 -9.51174 -8.91660 -5.04354 0.94051 1.19275 1.34268 1.61823 1.83061 1.90686 2.15356 2.33766 2.80767 2.99158 3.30394 3.41799 3.47963 3.50014 3.61353 3.69420 3.76000 3.82914 4.00543 4.13017 4.19893 4.29354 4.37750 4.39864 4.42825 4.44565 4.47349 4.55015 4.59500 4.60247 4.63051 4.69523 4.70948 4.73928 4.81137 4.85389 4.91973 4.96746 5.00060 5.03417 5.13793 5.29324 5.34843 5.35932 5.39538 5.42993 5.96531 6.14120 6.16378 6.28462 6.33101 6.39700 6.99494 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.117 4.117 3 C -0.088 4.088 4 C -0.149 4.149 5 C 0.105 3.895 6 C 0.514 3.486 7 O -0.521 6.521 8 N -0.710 5.710 9 C 0.122 3.878 10 H 0.120 0.880 11 C -0.143 4.143 12 C 0.064 3.936 13 H 0.093 0.907 14 O -0.375 6.375 15 C 0.029 3.971 16 C -0.169 4.169 17 N -0.419 5.419 18 C 0.005 3.995 19 C -0.195 4.195 20 C -0.188 4.188 21 C -0.021 4.021 22 C -0.045 4.045 23 O -0.544 6.544 24 Si 0.717 3.283 25 H 0.056 0.944 26 H 0.055 0.945 27 H 0.057 0.943 28 H 0.062 0.938 29 H 0.068 0.932 30 H 0.088 0.912 31 H 0.057 0.943 32 H 0.059 0.941 33 H 0.070 0.930 34 H 0.142 0.858 35 H 0.401 0.599 36 H 0.098 0.902 37 H 0.083 0.917 38 H 0.044 0.956 39 H 0.043 0.957 40 H 0.087 0.913 41 H 0.076 0.924 42 H 0.096 0.904 43 H 0.162 0.838 44 H 0.138 0.862 45 H 0.139 0.861 46 H 0.119 0.881 47 H 0.372 0.628 48 H -0.252 1.252 49 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.855 1.607 -1.469 3.591 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.155 4.155 3 C -0.108 4.108 4 C -0.207 4.207 5 C 0.000 4.000 6 C 0.298 3.702 7 O -0.395 6.395 8 N -0.362 5.362 9 C 0.017 3.983 10 H 0.138 0.862 11 C -0.182 4.182 12 C 0.006 3.994 13 H 0.111 0.889 14 O -0.293 6.293 15 C -0.068 4.068 16 C -0.208 4.208 17 N -0.097 5.097 18 C -0.125 4.125 19 C -0.219 4.219 20 C -0.213 4.213 21 C -0.131 4.131 22 C -0.155 4.155 23 O -0.349 6.349 24 Si 0.617 3.383 25 H 0.075 0.925 26 H 0.074 0.926 27 H 0.076 0.924 28 H 0.081 0.919 29 H 0.086 0.914 30 H 0.107 0.893 31 H 0.076 0.924 32 H 0.078 0.922 33 H 0.089 0.911 34 H 0.159 0.841 35 H 0.236 0.764 36 H 0.117 0.883 37 H 0.102 0.898 38 H 0.062 0.938 39 H 0.061 0.939 40 H 0.106 0.894 41 H 0.094 0.906 42 H 0.114 0.886 43 H 0.180 0.820 44 H 0.156 0.844 45 H 0.157 0.843 46 H 0.136 0.864 47 H 0.220 0.780 48 H -0.176 1.176 49 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges 2.409 1.102 -1.692 3.143 hybrid contribution -0.605 0.077 -0.119 0.621 sum 1.804 1.179 -1.811 2.815 Atomic orbital electron populations 1.21790 0.95127 1.01908 1.02073 1.21542 0.96505 0.94919 1.02531 1.21377 0.90836 0.98027 1.00544 1.21867 1.02654 1.00383 0.95805 1.22025 0.98247 0.89713 0.90025 1.20671 0.80856 0.90002 0.78623 1.90729 1.55980 1.53188 1.39608 1.45972 1.23544 1.09934 1.56754 1.22273 0.95060 0.82087 0.98866 0.86177 1.23623 0.95444 0.98958 1.00137 1.23438 0.90402 0.97912 0.87681 0.88936 1.87943 1.67804 1.27213 1.46331 1.22834 1.00702 0.83434 0.99825 1.24030 0.98062 1.00361 0.98314 1.43711 1.38580 1.21841 1.05554 1.21950 1.05307 1.02777 0.82461 1.20873 1.04113 0.97678 0.99211 1.20702 1.06447 1.02809 0.91366 1.20731 1.02538 0.93390 0.96466 1.24871 1.09044 0.94591 0.86989 1.86427 1.68856 1.39690 1.39887 0.94044 0.80027 0.83703 0.80576 0.92530 0.92585 0.92368 0.91915 0.91364 0.89320 0.92370 0.92213 0.91144 0.84054 0.76384 0.88328 0.89808 0.93772 0.93863 0.89423 0.90566 0.88580 0.82027 0.84404 0.84328 0.86418 0.78029 1.17623 1.17765 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.03 9.67 37.16 0.36 0.33 16 2 C -0.12 -0.06 5.28 -26.73 -0.14 -0.20 16 3 C -0.09 -0.05 1.60 -90.62 -0.14 -0.20 16 4 C -0.15 0.00 8.75 37.16 0.33 0.32 16 5 C 0.11 0.01 2.00 -69.09 -0.14 -0.13 16 6 C 0.51 0.51 5.72 -10.99 -0.06 0.45 16 7 O -0.52 -2.29 15.70 5.56 0.09 -2.20 16 8 N -0.71 1.05 5.35 -53.01 -0.28 0.76 16 9 C 0.12 -0.15 4.27 -67.12 -0.29 -0.44 16 10 H 0.12 0.02 7.42 -51.93 -0.39 -0.36 16 11 C -0.14 0.32 7.66 -25.92 -0.20 0.12 16 12 C 0.06 -0.08 4.31 -25.92 -0.11 -0.19 16 13 H 0.09 -0.21 7.87 -51.93 -0.41 -0.61 16 14 O -0.37 -0.24 10.71 -35.23 -0.38 -0.62 16 15 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 16 C -0.17 0.19 7.71 -25.91 -0.20 -0.01 16 17 N -0.42 -0.31 1.58 -106.71 -0.17 -0.48 16 18 C 0.00 0.01 10.48 -16.75 -0.18 -0.17 16 19 C -0.19 -0.37 10.86 -39.78 -0.43 -0.80 16 20 C -0.19 -0.24 9.43 -39.78 -0.38 -0.62 16 21 C -0.02 -0.01 6.15 -81.79 -0.50 -0.51 16 22 C -0.04 0.05 2.96 36.00 0.11 0.16 16 23 O -0.54 1.21 9.85 -35.23 -0.35 0.86 16 24 Si 0.72 -1.27 31.31 -169.99 -5.32 -6.59 16 25 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 26 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 27 H 0.06 -0.01 6.58 -51.93 -0.34 -0.35 16 28 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 29 H 0.07 0.13 7.23 -51.93 -0.38 -0.25 16 30 H 0.09 0.20 7.61 -51.93 -0.40 -0.20 16 31 H 0.06 0.06 7.26 -51.93 -0.38 -0.32 16 32 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.07 -0.01 6.60 -51.93 -0.34 -0.36 16 34 H 0.14 -0.13 5.15 -51.93 -0.27 -0.39 16 35 H 0.40 -1.51 7.30 -40.82 -0.30 -1.81 16 36 H 0.10 -0.26 8.12 -51.93 -0.42 -0.69 16 37 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 38 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 41 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 42 H 0.10 -0.07 8.14 -51.93 -0.42 -0.50 16 43 H 0.16 0.34 8.06 -52.49 -0.42 -0.08 16 44 H 0.14 0.11 8.06 -52.48 -0.42 -0.31 16 45 H 0.14 0.07 6.68 -52.48 -0.35 -0.28 16 46 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 47 H 0.37 -1.92 7.29 45.56 0.33 -1.59 16 48 H -0.25 -0.18 6.78 56.52 0.38 0.20 16 49 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 LS Contribution 386.71 15.07 5.83 5.83 Total: 0.00 -6.13 386.71 -9.80 -15.93 By element: Atomic # 1 Polarization: -4.34 SS G_CDS: -8.33 Total: -12.68 kcal Atomic # 6 Polarization: 0.06 SS G_CDS: -0.88 Total: -0.82 kcal Atomic # 7 Polarization: 0.73 SS G_CDS: -0.45 Total: 0.28 kcal Atomic # 8 Polarization: -1.32 SS G_CDS: -0.64 Total: -1.96 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.32 Total: -6.59 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -6.13 -9.80 -15.93 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12360566.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.999 kcal (2) G-P(sol) polarization free energy of solvation -6.134 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.132 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.801 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.934 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.933 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds