Wall clock time and date at job start Mon Mar 8 2021 04:09:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42899 * 114.00143 * 2 1 4 4 H 1.09004 * 112.85047 * 341.19253 * 3 2 1 5 5 C 1.53778 * 113.61817 * 112.50535 * 3 2 1 6 6 C 1.53778 * 87.08449 * 139.98154 * 5 3 2 7 7 H 1.09000 * 113.61263 * 89.11673 * 6 5 3 8 8 N 1.46502 * 113.61376 * 220.01807 * 6 5 3 9 9 C 1.34777 * 119.99843 * 252.49489 * 8 6 5 10 10 O 1.21569 * 119.99809 * 0.02562 * 9 8 6 11 11 C 1.47696 * 119.99637 * 179.97438 * 9 8 6 12 12 C 1.39804 * 120.15199 * 179.71928 * 11 9 8 13 13 F 1.35097 * 120.08669 * 0.02562 * 12 11 9 14 14 C 1.38311 * 119.82846 * 179.74512 * 12 11 9 15 15 C 1.38186 * 120.14822 * 0.56303 * 14 12 11 16 16 C 1.50700 * 119.84521 * 179.71387 * 15 14 12 17 17 O 1.42897 * 109.47382 * 254.97889 * 16 15 14 18 18 Si 1.86299 * 109.46831 * 14.98147 * 16 15 14 19 19 C 1.38653 * 120.31163 * 359.69624 * 15 14 12 20 20 F 1.35102 * 119.91570 * 180.02562 * 19 15 14 21 21 C 1.38063 * 120.16802 * 0.02562 * 19 15 14 22 22 C 1.53784 * 87.08081 * 334.56700 * 6 5 3 23 23 H 1.09002 * 109.47014 * 60.00353 * 1 2 3 24 24 H 1.09001 * 109.46895 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.47056 * 300.00055 * 1 2 3 26 26 H 1.08999 * 113.61111 * 254.53216 * 5 3 2 27 27 H 1.08999 * 113.61280 * 25.34600 * 5 3 2 28 28 H 0.97002 * 120.00147 * 72.49618 * 8 6 5 29 29 H 1.08003 * 119.92677 * 180.27760 * 14 12 11 30 30 H 1.09002 * 109.46959 * 134.97294 * 16 15 14 31 31 H 0.96700 * 114.00292 * 59.99995 * 17 16 15 32 32 H 1.48499 * 110.00330 * 58.68048 * 18 16 15 33 33 H 1.48508 * 109.99817 * 179.97438 * 18 16 15 34 34 H 1.08003 * 120.07898 * 179.97438 * 21 19 15 35 35 H 1.09004 * 113.61451 * 270.88641 * 22 6 5 36 36 H 1.08994 * 113.61477 * 139.97943 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3138 2.0789 -0.3238 5 6 2.7535 1.6489 1.3017 6 6 3.8227 2.3181 0.4221 7 1 3.6222 3.3693 0.2149 8 7 5.1935 2.0786 0.8802 9 6 5.8951 3.0746 1.4566 10 8 5.3903 4.1716 1.5968 11 6 7.2769 2.8329 1.9190 12 6 8.0096 3.8654 2.5120 13 9 7.4556 5.0880 2.6646 14 6 9.3012 3.6302 2.9473 15 6 9.8712 2.3817 2.7867 16 6 11.2813 2.1348 3.2577 17 8 12.1579 2.0825 2.1304 18 14 11.8084 3.5166 4.3907 19 6 9.1519 1.3549 2.1944 20 9 9.7169 0.1372 2.0418 21 6 7.8597 1.5737 1.7603 22 6 3.3756 1.3719 -0.7046 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 0.8900 26 1 2.2141 2.3477 1.9411 27 1 3.1154 0.7740 1.8417 28 1 5.5962 1.2032 0.7687 29 1 9.8671 4.4254 3.4097 30 1 11.3241 1.1877 3.7956 31 1 12.1708 2.8937 1.6042 32 1 10.8857 3.6019 5.5511 33 1 13.1972 3.2846 4.8626 34 1 7.3008 0.7730 1.2988 35 1 3.9088 0.4212 -0.7138 36 1 3.3384 1.8470 -1.6848 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_12360598.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:13 Heat of formation + Delta-G solvation = -135.868688 kcal Electronic energy + Delta-G solvation = -24094.273251 eV Core-core repulsion = 19989.674207 eV Total energy + Delta-G solvation = -4104.599044 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 300.101 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -50.11128 -50.00869 -41.57482 -40.52175 -39.56398 -37.74180 -37.29858 -34.61391 -33.03269 -31.43131 -28.27077 -27.68865 -26.87576 -25.30950 -24.47610 -23.46948 -21.85883 -21.26651 -19.61766 -18.81899 -18.74164 -18.05883 -17.92825 -17.37730 -16.95449 -16.88176 -16.58156 -16.28820 -16.22141 -16.00931 -15.95441 -15.64094 -15.55338 -15.26275 -14.94906 -14.54282 -14.22004 -13.79963 -13.62868 -13.58343 -13.23026 -13.02537 -12.86017 -12.41479 -12.29681 -12.24097 -12.17548 -11.94799 -11.11102 -10.71177 -10.65560 -10.55961 -10.19662 -9.84483 -5.20534 -0.85818 -0.38201 1.02865 1.37889 1.50227 1.78979 1.82900 2.22377 2.71810 2.75828 2.84225 3.02747 3.14378 3.29183 3.40024 3.42326 3.48016 3.67508 3.69778 3.76100 4.01800 4.19223 4.22674 4.27182 4.37089 4.40007 4.46249 4.58035 4.59908 4.60648 4.66555 4.70822 4.80921 4.86742 4.93193 5.29896 5.35119 6.14586 6.25001 6.34715 6.97488 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.375 6.375 3 C 0.064 3.936 4 H 0.094 0.906 5 C -0.169 4.169 6 C 0.125 3.875 7 H 0.123 0.877 8 N -0.711 5.711 9 C 0.561 3.439 10 O -0.513 6.513 11 C -0.142 4.142 12 C 0.160 3.840 13 F -0.104 7.104 14 C -0.131 4.131 15 C -0.100 4.100 16 C -0.072 4.072 17 O -0.529 6.529 18 Si 0.690 3.310 19 C 0.110 3.890 20 F -0.121 7.121 21 C -0.093 4.093 22 C -0.144 4.144 23 H 0.044 0.956 24 H 0.087 0.913 25 H 0.043 0.957 26 H 0.077 0.923 27 H 0.095 0.905 28 H 0.402 0.598 29 H 0.159 0.841 30 H 0.122 0.878 31 H 0.381 0.619 32 H -0.251 1.251 33 H -0.246 1.246 34 H 0.152 0.848 35 H 0.097 0.903 36 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.694 -0.014 -1.727 1.861 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.112 0.888 5 C -0.208 4.208 6 C 0.020 3.980 7 H 0.141 0.859 8 N -0.363 5.363 9 C 0.348 3.652 10 O -0.389 6.389 11 C -0.146 4.146 12 C 0.139 3.861 13 F -0.081 7.081 14 C -0.149 4.149 15 C -0.102 4.102 16 C -0.183 4.183 17 O -0.335 6.335 18 Si 0.589 3.411 19 C 0.091 3.909 20 F -0.099 7.099 21 C -0.113 4.113 22 C -0.182 4.182 23 H 0.062 0.938 24 H 0.106 0.894 25 H 0.062 0.938 26 H 0.096 0.904 27 H 0.113 0.887 28 H 0.238 0.762 29 H 0.176 0.824 30 H 0.140 0.860 31 H 0.229 0.771 32 H -0.175 1.175 33 H -0.170 1.170 34 H 0.169 0.831 35 H 0.116 0.884 36 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -0.585 0.237 -0.592 0.865 hybrid contribution -0.363 -0.955 -0.136 1.030 sum -0.947 -0.718 -0.728 1.394 Atomic orbital electron populations 1.22837 0.80665 1.03109 1.00187 1.87939 1.20083 1.26793 1.94550 1.23444 0.93751 0.85898 0.96358 0.88811 1.24029 0.97385 1.01488 0.97884 1.22282 0.79845 1.00836 0.95058 0.85925 1.45784 1.15015 1.14038 1.61416 1.17854 0.84607 0.84696 0.78072 1.90888 1.70198 1.23239 1.54559 1.19876 0.95800 0.93743 1.05180 1.17486 0.91004 0.80778 0.96787 1.91659 1.84977 1.39031 1.92469 1.20867 0.94109 0.97314 1.02598 1.20521 0.98111 0.92529 0.99048 1.25153 0.85722 1.11416 0.95966 1.86594 1.63102 1.42645 1.41128 0.94832 0.81259 0.84460 0.80515 1.17222 0.91493 0.81393 1.00820 1.91587 1.84749 1.40262 1.93296 1.21192 0.93913 0.96769 0.99418 1.23639 0.95742 1.00343 0.98496 0.93751 0.89435 0.93819 0.90384 0.88650 0.76163 0.82405 0.86044 0.77106 1.17474 1.17018 0.83068 0.88414 0.89734 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.36 10.71 -35.23 -0.38 -0.73 16 3 C 0.06 -0.06 4.31 -25.92 -0.11 -0.17 16 4 H 0.09 -0.20 7.87 -51.93 -0.41 -0.61 16 5 C -0.17 0.12 7.71 -25.92 -0.20 -0.08 16 6 C 0.12 -0.11 4.24 -67.12 -0.28 -0.39 16 7 H 0.12 0.02 7.47 -51.93 -0.39 -0.37 16 8 N -0.71 0.70 5.31 -54.00 -0.29 0.41 16 9 C 0.56 1.00 7.77 -12.40 -0.10 0.91 16 10 O -0.51 -2.87 14.94 5.31 0.08 -2.79 16 11 C -0.14 -0.04 5.88 -104.92 -0.62 -0.66 16 12 C 0.16 0.11 7.28 -38.97 -0.28 -0.17 16 13 F -0.10 -0.31 15.55 2.25 0.04 -0.28 16 14 C -0.13 0.21 8.62 -39.57 -0.34 -0.13 16 15 C -0.10 0.11 5.27 -104.49 -0.55 -0.44 16 16 C -0.07 0.10 2.44 36.01 0.09 0.18 16 17 O -0.53 0.42 12.88 -35.23 -0.45 -0.03 16 18 Si 0.69 -1.61 29.90 -169.99 -5.08 -6.69 16 19 C 0.11 -0.04 7.23 -39.49 -0.29 -0.32 16 20 F -0.12 -0.15 16.73 2.25 0.04 -0.11 16 21 C -0.09 0.14 9.51 -39.12 -0.37 -0.23 16 22 C -0.14 0.27 7.66 -25.91 -0.20 0.07 16 23 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 24 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 25 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 26 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 27 H 0.10 -0.04 8.14 -51.93 -0.42 -0.46 16 28 H 0.40 -1.41 6.76 -40.82 -0.28 -1.69 16 29 H 0.16 -0.64 5.10 -52.48 -0.27 -0.91 16 30 H 0.12 -0.08 7.89 -51.93 -0.41 -0.49 16 31 H 0.38 -1.93 8.70 45.56 0.40 -1.53 16 32 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 33 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 34 H 0.15 -0.63 6.40 -52.48 -0.34 -0.97 16 35 H 0.10 -0.21 8.12 -51.93 -0.42 -0.63 16 36 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 LS Contribution 316.17 15.07 4.76 4.76 Total: 0.00 -8.33 316.17 -7.29 -15.61 By element: Atomic # 1 Polarization: -5.93 SS G_CDS: -3.84 Total: -9.78 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -2.16 Total: -0.37 kcal Atomic # 7 Polarization: 0.70 SS G_CDS: -0.29 Total: 0.41 kcal Atomic # 8 Polarization: -2.81 SS G_CDS: -0.75 Total: -3.56 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.07 Total: -0.39 kcal Atomic # 14 Polarization: -1.61 SS G_CDS: -5.08 Total: -6.69 kcal Total LS contribution 4.76 Total: 4.76 kcal Total: -8.33 -7.29 -15.61 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12360598.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.256 kcal (2) G-P(sol) polarization free energy of solvation -8.327 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.583 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.286 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.612 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.869 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds