Wall clock time and date at job start Mon Mar 8 2021 04:09:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35653 * 117.00271 * 2 1 4 4 C 1.40141 * 120.15112 * 179.97438 * 3 2 1 5 5 C 1.47541 * 120.18797 * 359.95778 * 4 3 2 6 6 O 1.21586 * 120.00250 * 359.97438 * 5 4 3 7 7 N 1.34777 * 119.99261 * 179.97438 * 5 4 3 8 8 C 1.46502 * 119.99461 * 179.97438 * 7 5 4 9 9 H 1.09003 * 112.84947 * 23.80533 * 8 7 5 10 10 C 1.53783 * 113.61134 * 154.99821 * 8 7 5 11 11 C 1.53785 * 87.07951 * 139.98471 * 10 8 7 12 12 H 1.08997 * 113.61669 * 89.19991 * 11 10 8 13 13 O 1.42899 * 113.61192 * 220.01939 * 11 10 8 14 14 C 1.42905 * 113.99778 * 208.46731 * 13 11 10 15 15 C 1.53785 * 87.17149 * 334.60896 * 11 10 8 16 16 C 1.39704 * 119.61712 * 180.22815 * 4 3 2 17 17 C 1.37794 * 119.90483 * 359.51864 * 16 4 3 18 18 C 1.50702 * 119.84748 * 180.22897 * 17 16 4 19 19 O 1.42902 * 109.47283 * 300.23783 * 18 17 16 20 20 Si 1.86292 * 109.47205 * 180.23188 * 18 17 16 21 21 C 1.38543 * 120.30076 * 0.46487 * 17 16 4 22 22 C 1.38054 * 120.38964 * 359.78813 * 21 17 16 23 23 H 1.09003 * 109.47612 * 300.00551 * 1 2 3 24 24 H 1.09000 * 109.46779 * 59.99996 * 1 2 3 25 25 H 1.09000 * 109.47649 * 180.02562 * 1 2 3 26 26 H 0.96997 * 120.00702 * 0.02562 * 7 5 4 27 27 H 1.09000 * 113.61637 * 25.43393 * 10 8 7 28 28 H 1.09007 * 113.61496 * 254.52811 * 10 8 7 29 29 H 1.09001 * 109.46558 * 60.00281 * 14 13 11 30 30 H 1.09001 * 109.47103 * 179.97438 * 14 13 11 31 31 H 1.09000 * 109.47187 * 300.00233 * 14 13 11 32 32 H 1.09000 * 113.61294 * 139.93697 * 15 11 10 33 33 H 1.08997 * 113.61578 * 270.84385 * 15 11 10 34 34 H 1.08000 * 120.04636 * 179.72422 * 16 4 3 35 35 H 1.09002 * 109.47202 * 60.23343 * 18 17 16 36 36 H 0.96698 * 113.99454 * 299.99566 * 19 18 17 37 37 H 1.48499 * 110.00214 * 179.97438 * 20 18 17 38 38 H 1.48506 * 110.00258 * 301.32243 * 20 18 17 39 39 H 1.08006 * 119.80430 * 179.76519 * 21 17 16 40 40 H 1.08002 * 119.95710 * 180.02562 * 22 21 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2086 0.0000 4 6 3.4442 1.2856 0.0005 5 6 4.2550 0.0530 0.0021 6 8 3.7094 -1.0336 0.0033 7 7 5.6005 0.1316 0.0020 8 6 6.4056 -1.0923 0.0041 9 1 5.8705 -1.9517 -0.4000 10 6 7.8111 -0.9061 -0.5916 11 6 8.3237 -1.8195 0.5344 12 1 8.3149 -2.8783 0.2759 13 8 9.5683 -1.3952 1.0937 14 6 10.3606 -2.4601 1.6233 15 6 7.0982 -1.3742 1.3499 16 6 4.0668 2.5362 0.0054 17 6 3.3038 3.6836 -0.0005 18 6 3.9769 5.0319 -0.0005 19 8 4.7916 5.1577 1.1668 20 14 2.6828 6.3720 -0.0020 21 6 1.9207 3.6033 -0.0014 22 6 1.2926 2.3739 -0.0009 23 1 -0.3634 0.5139 0.8899 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3634 -1.0276 0.0005 26 1 6.0357 0.9984 0.0014 27 1 8.1809 0.1172 -0.5263 28 1 7.9237 -1.3352 -1.5873 29 1 10.5903 -3.1713 0.8299 30 1 11.2884 -2.0559 2.0283 31 1 9.8077 -2.9652 2.4153 32 1 6.6362 -2.1807 1.9192 33 1 7.2728 -0.4792 1.9469 34 1 5.1447 2.6036 0.0103 35 1 4.5996 5.1272 -0.8901 36 1 4.3025 5.0830 1.9976 37 1 3.3337 7.7067 -0.0013 38 1 1.8090 6.2330 -1.1947 39 1 1.3304 4.5077 -0.0022 40 1 0.2139 2.3194 -0.0021 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_12496546.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:17 Heat of formation + Delta-G solvation = -83.849654 kcal Electronic energy + Delta-G solvation = -23708.611154 eV Core-core repulsion = 20070.955965 eV Total energy + Delta-G solvation = -3637.655190 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.77584 -40.78205 -39.38407 -39.19516 -37.22272 -37.08997 -34.23571 -32.41692 -31.82060 -28.63669 -27.83501 -26.75954 -26.21509 -25.86853 -24.24638 -22.52739 -21.42705 -20.96111 -19.42788 -18.39384 -18.23138 -17.94338 -17.12564 -16.84485 -16.68867 -16.31630 -16.16281 -16.06970 -15.92647 -15.67710 -15.43749 -15.00523 -14.61678 -14.58141 -14.28556 -13.73018 -13.59259 -13.48303 -13.27534 -13.18887 -12.74550 -12.44906 -12.17338 -12.13089 -12.10792 -12.10029 -11.84691 -11.79890 -10.81454 -10.47284 -10.42463 -10.23257 -9.91933 -9.27502 -5.11445 -0.25214 0.19185 1.21859 1.54999 1.86701 1.91351 2.12975 2.21928 2.72677 2.92056 3.36338 3.43192 3.51678 3.55796 3.62065 3.66511 3.83789 3.86528 3.96642 4.07448 4.19203 4.19532 4.30601 4.34868 4.45958 4.47255 4.47354 4.56785 4.65382 4.70549 4.73023 4.78062 4.87404 4.93530 4.99307 5.04122 5.12962 5.23318 5.49273 5.57896 6.24151 6.28781 6.50268 6.58837 7.36002 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.175 4.175 5 C 0.563 3.437 6 O -0.516 6.516 7 N -0.718 5.718 8 C 0.127 3.873 9 H 0.120 0.880 10 C -0.144 4.144 11 C 0.064 3.936 12 H 0.092 0.908 13 O -0.376 6.376 14 C 0.029 3.971 15 C -0.169 4.169 16 C -0.019 4.019 17 C -0.169 4.169 18 C -0.062 4.062 19 O -0.540 6.540 20 Si 0.686 3.314 21 C -0.048 4.048 22 C -0.214 4.214 23 H 0.059 0.941 24 H 0.058 0.942 25 H 0.105 0.895 26 H 0.400 0.600 27 H 0.097 0.903 28 H 0.082 0.918 29 H 0.043 0.957 30 H 0.087 0.913 31 H 0.043 0.957 32 H 0.076 0.924 33 H 0.094 0.906 34 H 0.136 0.864 35 H 0.115 0.885 36 H 0.380 0.620 37 H -0.253 1.253 38 H -0.257 1.257 39 H 0.134 0.866 40 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.821 1.479 1.446 2.756 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.190 6.190 3 C 0.144 3.856 4 C -0.179 4.179 5 C 0.350 3.650 6 O -0.392 6.392 7 N -0.370 5.370 8 C 0.022 3.978 9 H 0.137 0.863 10 C -0.182 4.182 11 C 0.005 3.995 12 H 0.110 0.890 13 O -0.294 6.294 14 C -0.068 4.068 15 C -0.208 4.208 16 C -0.038 4.038 17 C -0.170 4.170 18 C -0.173 4.173 19 O -0.346 6.346 20 Si 0.588 3.412 21 C -0.065 4.065 22 C -0.233 4.233 23 H 0.078 0.922 24 H 0.076 0.924 25 H 0.123 0.877 26 H 0.236 0.764 27 H 0.115 0.885 28 H 0.101 0.899 29 H 0.062 0.938 30 H 0.105 0.895 31 H 0.061 0.939 32 H 0.094 0.906 33 H 0.113 0.887 34 H 0.154 0.846 35 H 0.132 0.868 36 H 0.227 0.773 37 H -0.178 1.178 38 H -0.182 1.182 39 H 0.151 0.849 40 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.961 1.423 0.568 2.489 hybrid contribution 0.268 -0.100 -0.302 0.416 sum -1.693 1.323 0.266 2.165 Atomic orbital electron populations 1.23236 0.78194 1.04756 1.01451 1.86381 1.21194 1.25203 1.86185 1.19090 0.90937 0.85059 0.90527 1.19341 0.90898 0.93900 1.13739 1.17982 0.81912 0.88675 0.76382 1.90838 1.71510 1.28607 1.48255 1.45808 1.05811 1.09336 1.76076 1.22211 0.89847 0.88906 0.96867 0.86259 1.23619 0.94061 1.01848 0.98666 1.23459 0.83445 0.98176 0.94404 0.88985 1.87942 1.30613 1.33093 1.77743 1.22824 0.95481 0.90721 0.97743 1.24058 0.96002 1.02976 0.97757 1.20973 0.99950 0.89834 0.93059 1.20129 0.93534 0.96043 1.07249 1.24965 1.01858 0.99214 0.91298 1.86505 1.37290 1.95369 1.15411 0.94786 0.80214 0.77663 0.88514 1.20996 0.93655 0.97338 0.94552 1.21231 1.00743 0.91565 1.09723 0.92247 0.92351 0.87669 0.76388 0.88498 0.89944 0.93843 0.89492 0.93852 0.90558 0.88711 0.84647 0.86784 0.77283 1.17814 1.18245 0.84898 0.84127 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.98 16 2 O -0.28 -1.00 8.57 -40.54 -0.35 -1.35 16 3 C 0.19 0.47 6.70 -38.70 -0.26 0.21 16 4 C -0.17 -0.42 5.89 -104.84 -0.62 -1.04 16 5 C 0.56 2.21 7.76 -12.47 -0.10 2.11 16 6 O -0.52 -3.92 14.76 -16.59 -0.24 -4.16 16 7 N -0.72 -0.74 5.31 -53.96 -0.29 -1.02 16 8 C 0.13 0.10 4.24 -67.03 -0.28 -0.18 16 9 H 0.12 0.23 7.46 -51.93 -0.39 -0.16 16 10 C -0.14 0.06 7.67 -25.92 -0.20 -0.14 16 11 C 0.06 0.02 4.30 -25.91 -0.11 -0.09 16 12 H 0.09 -0.09 7.88 -51.93 -0.41 -0.50 16 13 O -0.38 -0.73 10.71 -35.23 -0.38 -1.11 16 14 C 0.03 -0.01 10.85 101.05 1.10 1.09 16 15 C -0.17 -0.11 7.73 -25.83 -0.20 -0.31 16 16 C -0.02 0.00 9.08 -39.20 -0.36 -0.36 16 17 C -0.17 0.12 5.39 -104.67 -0.56 -0.44 16 18 C -0.06 0.08 2.81 36.01 0.10 0.18 16 19 O -0.54 0.50 12.76 -35.23 -0.45 0.05 16 20 Si 0.69 -1.34 29.77 -169.99 -5.06 -6.40 16 21 C -0.05 0.06 8.66 -39.54 -0.34 -0.29 16 22 C -0.21 0.06 9.03 -39.48 -0.36 -0.30 16 23 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 24 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 25 H 0.10 -0.18 8.14 -51.93 -0.42 -0.61 16 26 H 0.40 -0.48 6.76 -40.82 -0.28 -0.76 16 27 H 0.10 -0.05 8.12 -51.93 -0.42 -0.47 16 28 H 0.08 -0.09 8.14 -51.92 -0.42 -0.51 16 29 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 30 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 31 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 33 H 0.09 0.10 8.14 -51.93 -0.42 -0.32 16 34 H 0.14 -0.21 6.40 -52.49 -0.34 -0.55 16 35 H 0.11 -0.12 7.96 -51.93 -0.41 -0.53 16 36 H 0.38 -1.72 8.70 45.56 0.40 -1.33 16 37 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 38 H -0.26 -0.07 7.11 56.52 0.40 0.33 16 39 H 0.13 -0.44 4.85 -52.48 -0.25 -0.70 16 40 H 0.14 -0.35 6.30 -52.49 -0.33 -0.68 16 LS Contribution 332.76 15.07 5.01 5.01 Total: 0.00 -8.89 332.76 -8.33 -17.23 By element: Atomic # 1 Polarization: -4.28 SS G_CDS: -5.38 Total: -9.66 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: -1.20 Total: 1.42 kcal Atomic # 7 Polarization: -0.74 SS G_CDS: -0.29 Total: -1.02 kcal Atomic # 8 Polarization: -5.16 SS G_CDS: -1.42 Total: -6.57 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.06 Total: -6.40 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -8.89 -8.33 -17.23 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12496546.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.623 kcal (2) G-P(sol) polarization free energy of solvation -8.894 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.517 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.332 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.226 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.850 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds