Wall clock time and date at job start Mon Mar 8 2021 04:09:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42899 * 113.99572 * 2 1 4 4 H 1.08998 * 112.85320 * 341.19486 * 3 2 1 5 5 C 1.53782 * 113.61631 * 112.50663 * 3 2 1 6 6 C 1.53773 * 87.08179 * 139.97774 * 5 3 2 7 7 H 1.09000 * 113.69343 * 89.12666 * 6 5 3 8 8 N 1.46504 * 113.61227 * 220.01827 * 6 5 3 9 9 C 1.34779 * 119.99679 * 252.49419 * 8 6 5 10 10 O 1.21567 * 120.00456 * 0.02562 * 9 8 6 11 11 C 1.47731 * 119.99828 * 179.97438 * 9 8 6 12 12 C 1.39624 * 120.11893 * 180.02562 * 11 9 8 13 13 C 1.37861 * 119.87659 * 179.97438 * 12 11 9 14 14 C 1.50709 * 119.93875 * 180.02562 * 13 12 11 15 15 O 1.42897 * 109.47351 * 255.00703 * 14 13 12 16 16 Si 1.86298 * 109.46828 * 135.00316 * 14 13 12 17 17 C 1.38623 * 120.12329 * 0.02661 * 13 12 11 18 18 F 1.35095 * 119.88435 * 180.26901 * 17 13 12 19 19 C 1.38685 * 120.23723 * 359.97438 * 17 13 12 20 20 C 1.37814 * 120.11672 * 359.97438 * 19 17 13 21 21 C 1.53776 * 87.08561 * 334.56722 * 6 5 3 22 22 H 1.08996 * 109.47674 * 60.00280 * 1 2 3 23 23 H 1.09001 * 109.46926 * 180.02562 * 1 2 3 24 24 H 1.09003 * 109.47031 * 299.99980 * 1 2 3 25 25 H 1.08994 * 113.61496 * 25.42539 * 5 3 2 26 26 H 1.08997 * 113.61043 * 254.52710 * 5 3 2 27 27 H 0.96998 * 120.00046 * 72.50035 * 8 6 5 28 28 H 1.08003 * 120.06085 * 359.96035 * 12 11 9 29 29 H 1.09000 * 109.46618 * 15.00442 * 14 13 12 30 30 H 0.96696 * 113.99782 * 299.99731 * 15 14 13 31 31 H 1.48502 * 109.99968 * 58.68548 * 16 14 13 32 32 H 1.48508 * 109.99731 * 180.02562 * 16 14 13 33 33 H 1.08006 * 119.93841 * 179.97438 * 19 17 13 34 34 H 1.08000 * 120.05620 * 179.97438 * 20 19 17 35 35 H 1.08994 * 113.61954 * 139.97993 * 21 6 5 36 36 H 1.09006 * 113.61524 * 270.88972 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 -0.3238 5 6 2.7534 1.6490 1.3017 6 6 3.8226 2.3182 0.4221 7 1 3.6234 3.3695 0.2142 8 7 5.1934 2.0787 0.8803 9 6 5.8950 3.0748 1.4566 10 8 5.3902 4.1718 1.5968 11 6 7.2771 2.8332 1.9191 12 6 8.0059 3.8631 2.5170 13 6 9.2951 3.6319 2.9472 14 6 10.0830 4.7424 3.5933 15 8 11.0565 5.2352 2.6705 16 14 10.9414 4.0918 5.1133 17 6 9.8682 2.3799 2.7866 18 9 11.1300 2.1573 3.2149 19 6 9.1487 1.3534 2.1934 20 6 7.8589 1.5733 1.7607 21 6 3.3755 1.3720 -0.7046 22 1 -0.3634 0.5137 -0.8899 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5138 0.8900 25 1 3.1166 0.7742 1.8410 26 1 2.2140 2.3477 1.9411 27 1 5.5961 1.2034 0.7687 28 1 7.5607 4.8391 2.6420 29 1 9.4078 5.5504 3.8751 30 1 11.6919 4.5685 2.3760 31 1 11.8410 2.9685 4.7469 32 1 11.7214 5.1775 5.7600 33 1 9.6000 0.3800 2.0703 34 1 7.2996 0.7734 1.2985 35 1 3.3383 1.8471 -1.6848 36 1 3.9088 0.4213 -0.7138 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_12496548.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:19 Heat of formation + Delta-G solvation = -86.706787 kcal Electronic energy + Delta-G solvation = -21631.852358 eV Core-core repulsion = 17998.839109 eV Total energy + Delta-G solvation = -3633.013249 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.110 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -50.48727 -41.60369 -40.50532 -39.36314 -37.78448 -37.28304 -34.48658 -32.85402 -31.89063 -27.94318 -27.05909 -26.86805 -25.92623 -24.00240 -23.55998 -21.57170 -21.09653 -19.23968 -18.94309 -18.35962 -17.86516 -17.77023 -17.14423 -16.84974 -16.53383 -16.29701 -16.06515 -15.78693 -15.59369 -15.26238 -15.11750 -14.84811 -14.69005 -14.08301 -13.78150 -13.63704 -13.58896 -13.32217 -12.98650 -12.84351 -12.37419 -12.26641 -12.22308 -11.94091 -11.25701 -11.10113 -10.83376 -10.54999 -10.23723 -10.16417 -9.87588 -4.94811 -0.57360 -0.07800 1.21044 1.55682 1.63645 1.91900 2.01610 2.50715 2.82362 2.89442 3.18659 3.31913 3.40371 3.44480 3.46885 3.52937 3.71986 3.77573 3.80492 4.02959 4.18447 4.27318 4.39245 4.40543 4.51658 4.60469 4.61682 4.67974 4.71268 4.76213 4.82741 4.87746 4.90777 4.94814 5.03256 5.37173 5.50474 6.15642 6.27952 6.34807 7.07687 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.168 4.168 6 C 0.124 3.876 7 H 0.121 0.879 8 N -0.713 5.713 9 C 0.563 3.437 10 O -0.530 6.530 11 C -0.144 4.144 12 C -0.009 4.009 13 C -0.152 4.152 14 C -0.074 4.074 15 O -0.523 6.523 16 Si 0.675 3.325 17 C 0.119 3.881 18 F -0.123 7.123 19 C -0.152 4.152 20 C -0.055 4.055 21 C -0.144 4.144 22 H 0.044 0.956 23 H 0.087 0.913 24 H 0.043 0.957 25 H 0.095 0.905 26 H 0.077 0.923 27 H 0.402 0.598 28 H 0.151 0.849 29 H 0.125 0.875 30 H 0.375 0.625 31 H -0.231 1.231 32 H -0.260 1.260 33 H 0.147 0.853 34 H 0.139 0.861 35 H 0.083 0.917 36 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.820 -4.313 -0.381 5.167 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.207 4.207 6 C 0.019 3.981 7 H 0.139 0.861 8 N -0.365 5.365 9 C 0.351 3.649 10 O -0.407 6.407 11 C -0.148 4.148 12 C -0.028 4.028 13 C -0.153 4.153 14 C -0.183 4.183 15 O -0.329 6.329 16 Si 0.575 3.425 17 C 0.100 3.900 18 F -0.101 7.101 19 C -0.171 4.171 20 C -0.073 4.073 21 C -0.183 4.183 22 H 0.062 0.938 23 H 0.106 0.894 24 H 0.062 0.938 25 H 0.114 0.886 26 H 0.096 0.904 27 H 0.238 0.762 28 H 0.168 0.832 29 H 0.142 0.858 30 H 0.223 0.777 31 H -0.154 1.154 32 H -0.185 1.185 33 H 0.165 0.835 34 H 0.156 0.844 35 H 0.102 0.898 36 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -2.595 -3.286 0.213 4.193 hybrid contribution 0.757 -0.412 -1.069 1.373 sum -1.838 -3.698 -0.856 4.217 Atomic orbital electron populations 1.22835 0.80687 1.03092 1.00182 1.87938 1.20062 1.26827 1.94560 1.23453 0.93747 0.85856 0.96440 0.88871 1.24019 0.97389 1.01468 0.97828 1.22251 0.80151 1.00702 0.94965 0.86076 1.45809 1.14907 1.14196 1.61549 1.18146 0.85119 0.84313 0.77359 1.90815 1.70745 1.23678 1.55434 1.19998 0.94977 0.95060 1.04724 1.21045 0.91273 0.99300 0.91171 1.20270 0.96705 0.94315 1.04013 1.24995 0.94146 0.98772 1.00383 1.86657 1.44091 1.39726 1.62473 0.95444 0.85819 0.81627 0.79658 1.17911 0.80221 0.94093 0.97817 1.91578 1.36981 1.95046 1.86501 1.21105 0.95205 0.99519 1.01273 1.21188 0.94156 0.95901 0.96102 1.23637 0.95755 1.00359 0.98515 0.93780 0.89448 0.93811 0.88645 0.90425 0.76202 0.83170 0.85754 0.77701 1.15425 1.18465 0.83525 0.84373 0.89845 0.88457 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.28 10.71 -35.23 -0.38 -0.66 16 3 C 0.06 -0.07 4.31 -25.92 -0.11 -0.18 16 4 H 0.09 -0.21 7.87 -51.93 -0.41 -0.61 16 5 C -0.17 0.17 7.71 -25.92 -0.20 -0.03 16 6 C 0.12 -0.13 4.24 -67.12 -0.28 -0.42 16 7 H 0.12 0.02 7.46 -51.93 -0.39 -0.37 16 8 N -0.71 0.95 5.31 -54.00 -0.29 0.66 16 9 C 0.56 0.73 7.77 -12.38 -0.10 0.64 16 10 O -0.53 -2.65 15.94 5.31 0.08 -2.57 16 11 C -0.14 0.02 5.87 -104.97 -0.62 -0.60 16 12 C -0.01 0.00 9.21 -39.20 -0.36 -0.36 16 13 C -0.15 -0.01 4.78 -104.61 -0.50 -0.51 16 14 C -0.07 -0.01 2.81 36.01 0.10 0.09 16 15 O -0.52 -0.99 12.88 -35.23 -0.45 -1.45 16 16 Si 0.68 -0.14 30.81 -169.99 -5.24 -5.38 16 17 C 0.12 -0.03 6.63 -39.27 -0.26 -0.29 16 18 F -0.12 -0.10 12.57 2.25 0.03 -0.07 16 19 C -0.15 0.29 10.01 -39.57 -0.40 -0.11 16 20 C -0.05 0.13 9.54 -39.20 -0.37 -0.24 16 21 C -0.14 0.29 7.66 -25.92 -0.20 0.09 16 22 H 0.04 -0.09 8.14 -51.93 -0.42 -0.52 16 23 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 24 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 25 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 27 H 0.40 -1.58 6.76 -40.82 -0.28 -1.86 16 28 H 0.15 0.08 7.59 -52.48 -0.40 -0.32 16 29 H 0.12 -0.10 7.77 -51.93 -0.40 -0.51 16 30 H 0.38 -0.23 8.42 45.56 0.38 0.15 16 31 H -0.23 -0.37 5.27 56.52 0.30 -0.07 16 32 H -0.26 -0.80 7.11 56.52 0.40 -0.39 16 33 H 0.15 -0.55 8.06 -52.48 -0.42 -0.97 16 34 H 0.14 -0.74 6.40 -52.49 -0.34 -1.08 16 35 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.10 -0.23 8.12 -51.93 -0.42 -0.65 16 LS Contribution 309.26 15.07 4.66 4.66 Total: 0.00 -7.28 309.26 -8.29 -15.57 By element: Atomic # 1 Polarization: -5.40 SS G_CDS: -4.51 Total: -9.91 kcal Atomic # 6 Polarization: 1.34 SS G_CDS: -2.20 Total: -0.86 kcal Atomic # 7 Polarization: 0.95 SS G_CDS: -0.29 Total: 0.66 kcal Atomic # 8 Polarization: -3.93 SS G_CDS: -0.75 Total: -4.67 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.03 Total: -0.07 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: -5.24 Total: -5.38 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -7.28 -8.29 -15.57 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12496548.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.137 kcal (2) G-P(sol) polarization free energy of solvation -7.280 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.416 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.291 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.570 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.707 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds