Wall clock time and date at job start Mon Mar 8 2021 04:09:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42899 * 113.99572 * 2 1 4 4 H 1.08998 * 112.85320 * 341.19486 * 3 2 1 5 5 C 1.53782 * 113.61631 * 112.50663 * 3 2 1 6 6 C 1.53773 * 87.08179 * 139.97774 * 5 3 2 7 7 H 1.09000 * 113.69343 * 89.12666 * 6 5 3 8 8 N 1.46504 * 113.61227 * 220.01827 * 6 5 3 9 9 C 1.34779 * 119.99679 * 252.49419 * 8 6 5 10 10 O 1.21567 * 120.00456 * 0.02562 * 9 8 6 11 11 C 1.47731 * 119.99828 * 179.97438 * 9 8 6 12 12 C 1.39624 * 120.11893 * 180.02562 * 11 9 8 13 13 C 1.37861 * 119.87659 * 179.97438 * 12 11 9 14 14 C 1.50709 * 119.93875 * 180.02562 * 13 12 11 15 15 O 1.42897 * 109.47351 * 255.00703 * 14 13 12 16 16 Si 1.86298 * 109.46828 * 135.00316 * 14 13 12 17 17 C 1.38623 * 120.12329 * 0.02661 * 13 12 11 18 18 F 1.35095 * 119.88435 * 180.26901 * 17 13 12 19 19 C 1.38685 * 120.23723 * 359.97438 * 17 13 12 20 20 C 1.37814 * 120.11672 * 359.97438 * 19 17 13 21 21 C 1.53776 * 87.08561 * 334.56722 * 6 5 3 22 22 H 1.08996 * 109.47674 * 60.00280 * 1 2 3 23 23 H 1.09001 * 109.46926 * 180.02562 * 1 2 3 24 24 H 1.09003 * 109.47031 * 299.99980 * 1 2 3 25 25 H 1.08994 * 113.61496 * 25.42539 * 5 3 2 26 26 H 1.08997 * 113.61043 * 254.52710 * 5 3 2 27 27 H 0.96998 * 120.00046 * 72.50035 * 8 6 5 28 28 H 1.08003 * 120.06085 * 359.96035 * 12 11 9 29 29 H 1.09000 * 109.46618 * 15.00442 * 14 13 12 30 30 H 0.96696 * 113.99782 * 299.99731 * 15 14 13 31 31 H 1.48502 * 109.99968 * 58.68548 * 16 14 13 32 32 H 1.48508 * 109.99731 * 180.02562 * 16 14 13 33 33 H 1.08006 * 119.93841 * 179.97438 * 19 17 13 34 34 H 1.08000 * 120.05620 * 179.97438 * 20 19 17 35 35 H 1.08994 * 113.61954 * 139.97993 * 21 6 5 36 36 H 1.09006 * 113.61524 * 270.88972 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 -0.3238 5 6 2.7534 1.6490 1.3017 6 6 3.8226 2.3182 0.4221 7 1 3.6234 3.3695 0.2142 8 7 5.1934 2.0787 0.8803 9 6 5.8950 3.0748 1.4566 10 8 5.3902 4.1718 1.5968 11 6 7.2771 2.8332 1.9191 12 6 8.0059 3.8631 2.5170 13 6 9.2951 3.6319 2.9472 14 6 10.0830 4.7424 3.5933 15 8 11.0565 5.2352 2.6705 16 14 10.9414 4.0918 5.1133 17 6 9.8682 2.3799 2.7866 18 9 11.1300 2.1573 3.2149 19 6 9.1487 1.3534 2.1934 20 6 7.8589 1.5733 1.7607 21 6 3.3755 1.3720 -0.7046 22 1 -0.3634 0.5137 -0.8899 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5138 0.8900 25 1 3.1166 0.7742 1.8410 26 1 2.2140 2.3477 1.9411 27 1 5.5961 1.2034 0.7687 28 1 7.5607 4.8391 2.6420 29 1 9.4078 5.5504 3.8751 30 1 11.6919 4.5685 2.3760 31 1 11.8410 2.9685 4.7469 32 1 11.7214 5.1775 5.7600 33 1 9.6000 0.3800 2.0703 34 1 7.2996 0.7734 1.2985 35 1 3.3383 1.8471 -1.6848 36 1 3.9088 0.4213 -0.7138 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_12496548.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:19 Heat of formation + Delta-G solvation = -86.228953 kcal Electronic energy + Delta-G solvation = -21631.831638 eV Core-core repulsion = 17998.839109 eV Total energy + Delta-G solvation = -3632.992528 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.110 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -50.48187 -41.59950 -40.43174 -39.39470 -37.83331 -37.26098 -34.50397 -32.79963 -31.83275 -27.83254 -27.03585 -26.75547 -25.88410 -23.93623 -23.50431 -21.58479 -21.01645 -19.20570 -18.92348 -18.30905 -17.91027 -17.73712 -17.13140 -16.78577 -16.53373 -16.27193 -16.04333 -15.80413 -15.61226 -15.22988 -15.04593 -14.75128 -14.68234 -14.04147 -13.86918 -13.60454 -13.46188 -13.30049 -12.97259 -12.73978 -12.37139 -12.18623 -12.13339 -11.84737 -11.34824 -11.19313 -10.87018 -10.46732 -10.22676 -10.12198 -9.82483 -4.97233 -0.53059 0.01326 1.19251 1.54286 1.58228 1.92132 1.98778 2.53970 2.93300 2.96184 3.22514 3.41980 3.44652 3.54433 3.57103 3.61314 3.81639 3.89978 3.96406 4.10312 4.28005 4.35672 4.52858 4.56081 4.62670 4.73233 4.74072 4.76224 4.86956 4.89053 4.94228 4.96925 4.98860 5.02594 5.10421 5.43693 5.59143 6.26314 6.30292 6.42473 7.08223 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.395 6.395 3 C 0.060 3.940 4 H 0.102 0.898 5 C -0.166 4.166 6 C 0.122 3.878 7 H 0.107 0.893 8 N -0.698 5.698 9 C 0.561 3.439 10 O -0.576 6.576 11 C -0.153 4.153 12 C -0.021 4.021 13 C -0.155 4.155 14 C -0.083 4.083 15 O -0.543 6.543 16 Si 0.750 3.250 17 C 0.109 3.891 18 F -0.130 7.130 19 C -0.147 4.147 20 C -0.040 4.040 21 C -0.134 4.134 22 H 0.051 0.949 23 H 0.092 0.908 24 H 0.047 0.953 25 H 0.095 0.905 26 H 0.070 0.930 27 H 0.417 0.583 28 H 0.140 0.860 29 H 0.130 0.870 30 H 0.384 0.616 31 H -0.252 1.252 32 H -0.307 1.307 33 H 0.172 0.828 34 H 0.173 0.827 35 H 0.090 0.910 36 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.103 -6.052 -1.041 6.880 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.314 6.314 3 C 0.001 3.999 4 H 0.120 0.880 5 C -0.205 4.205 6 C 0.017 3.983 7 H 0.125 0.875 8 N -0.350 5.350 9 C 0.350 3.650 10 O -0.456 6.456 11 C -0.157 4.157 12 C -0.040 4.040 13 C -0.157 4.157 14 C -0.192 4.192 15 O -0.351 6.351 16 Si 0.654 3.346 17 C 0.090 3.910 18 F -0.108 7.108 19 C -0.165 4.165 20 C -0.058 4.058 21 C -0.172 4.172 22 H 0.070 0.930 23 H 0.111 0.889 24 H 0.065 0.935 25 H 0.113 0.887 26 H 0.089 0.911 27 H 0.255 0.745 28 H 0.158 0.842 29 H 0.148 0.852 30 H 0.233 0.767 31 H -0.177 1.177 32 H -0.235 1.235 33 H 0.189 0.811 34 H 0.190 0.810 35 H 0.109 0.891 36 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -2.895 -5.076 -0.469 5.862 hybrid contribution 0.844 0.117 -0.873 1.220 sum -2.051 -4.959 -1.342 5.532 Atomic orbital electron populations 1.22952 0.79894 1.03686 1.00748 1.87900 1.21096 1.27743 1.94676 1.23566 0.94305 0.85589 0.96428 0.88043 1.23986 0.97385 1.01201 0.97902 1.22199 0.80214 1.00247 0.95661 0.87531 1.45712 1.14636 1.14359 1.60295 1.18393 0.85624 0.84010 0.76984 1.90793 1.71783 1.25552 1.57500 1.19980 0.94345 0.96032 1.05299 1.21024 0.91624 0.99363 0.91953 1.20146 0.96500 0.94456 1.04548 1.25171 0.94248 0.99344 1.00406 1.86622 1.44708 1.40787 1.62992 0.94623 0.83969 0.78319 0.77714 1.18116 0.80113 0.94487 0.98308 1.91557 1.37523 1.95060 1.86698 1.21405 0.95085 0.99991 1.00036 1.21508 0.93992 0.95583 0.94760 1.23583 0.95000 1.00306 0.98295 0.93006 0.88915 0.93473 0.88667 0.91113 0.74454 0.84198 0.85212 0.76732 1.17708 1.23534 0.81087 0.80952 0.89132 0.87644 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 10.85 113.37 1.23 1.16 16 2 O -0.40 -0.37 10.71 -148.98 -1.60 -1.97 16 3 C 0.06 -0.15 4.31 31.12 0.13 -0.02 16 4 H 0.10 -0.47 7.87 -2.39 -0.02 -0.49 16 5 C -0.17 0.33 7.71 31.12 0.24 0.57 16 6 C 0.12 -0.27 4.24 45.51 0.19 -0.07 16 7 H 0.11 0.13 7.46 -2.39 -0.02 0.11 16 8 N -0.70 2.31 5.31 -443.02 -2.35 -0.04 16 9 C 0.56 1.64 7.77 86.75 0.67 2.31 16 10 O -0.58 -6.69 15.94 -3.93 -0.06 -6.76 16 11 C -0.15 0.08 5.87 -20.09 -0.12 -0.04 16 12 C -0.02 -0.03 9.21 22.52 0.21 0.17 16 13 C -0.16 -0.08 4.78 -19.86 -0.09 -0.18 16 14 C -0.08 -0.11 2.81 71.24 0.20 0.09 16 15 O -0.54 -2.66 12.88 -148.98 -1.92 -4.58 16 16 Si 0.75 0.39 30.81 68.60 2.11 2.50 16 17 C 0.11 -0.11 6.63 22.47 0.15 0.04 16 18 F -0.13 -0.17 12.57 44.97 0.57 0.39 16 19 C -0.15 0.83 10.01 22.28 0.22 1.05 16 20 C -0.04 0.27 9.54 22.52 0.21 0.49 16 21 C -0.13 0.66 7.66 31.12 0.24 0.90 16 22 H 0.05 -0.25 8.14 -2.39 -0.02 -0.27 16 23 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 24 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 25 H 0.09 -0.18 8.14 -2.39 -0.02 -0.20 16 26 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 27 H 0.42 -4.08 6.76 -92.71 -0.63 -4.70 16 28 H 0.14 0.45 7.59 -2.91 -0.02 0.43 16 29 H 0.13 -0.04 7.77 -2.39 -0.02 -0.06 16 30 H 0.38 -0.08 8.42 -74.06 -0.62 -0.71 16 31 H -0.25 -0.96 5.27 99.48 0.52 -0.44 16 32 H -0.31 -2.54 7.11 99.48 0.71 -1.83 16 33 H 0.17 -1.80 8.06 -2.91 -0.02 -1.82 16 34 H 0.17 -2.45 6.40 -2.91 -0.02 -2.47 16 35 H 0.09 -0.55 8.14 -2.39 -0.02 -0.56 16 36 H 0.11 -0.67 8.12 -2.38 -0.02 -0.69 16 Total: 0.00 -18.36 309.26 -0.03 -18.40 By element: Atomic # 1 Polarization: -14.14 SS G_CDS: -0.27 Total: -14.41 kcal Atomic # 6 Polarization: 2.98 SS G_CDS: 3.49 Total: 6.47 kcal Atomic # 7 Polarization: 2.31 SS G_CDS: -2.35 Total: -0.04 kcal Atomic # 8 Polarization: -9.73 SS G_CDS: -3.58 Total: -13.31 kcal Atomic # 9 Polarization: -0.17 SS G_CDS: 0.57 Total: 0.39 kcal Atomic # 14 Polarization: 0.39 SS G_CDS: 2.11 Total: 2.50 kcal Total: -18.36 -0.03 -18.40 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12496548.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.831 kcal (2) G-P(sol) polarization free energy of solvation -18.365 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.195 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.034 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.398 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.229 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds