Wall clock time and date at job start Mon Mar 8 2021 04:09:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42899 * 114.00647 * 2 1 4 4 H 1.09005 * 112.90173 * 341.24897 * 3 2 1 5 5 C 1.53777 * 113.61908 * 112.49969 * 3 2 1 6 6 C 1.53778 * 87.08221 * 139.98238 * 5 3 2 7 7 H 1.09002 * 113.68900 * 89.12517 * 6 5 3 8 8 N 1.46498 * 113.61220 * 220.02018 * 6 5 3 9 9 C 1.34777 * 119.99828 * 252.21874 * 8 6 5 10 10 O 1.21283 * 120.00222 * 0.28168 * 9 8 6 11 11 C 1.50703 * 120.00290 * 180.27728 * 9 8 6 12 12 N 1.46492 * 109.47441 * 180.02562 * 11 9 8 13 13 C 1.35041 * 125.93318 * 124.71837 * 12 11 9 14 14 C 1.35085 * 107.98213 * 179.83718 * 13 12 11 15 15 C 1.50699 * 126.07901 * 180.19720 * 14 13 12 16 16 O 1.42901 * 109.47028 * 255.26863 * 15 14 13 17 17 Si 1.86303 * 109.46810 * 15.26296 * 15 14 13 18 18 C 1.40850 * 107.84464 * 0.42127 * 14 13 12 19 19 C 1.48420 * 126.03451 * 179.77050 * 18 14 13 20 20 C 1.39318 * 120.12379 * 324.71397 * 19 18 14 21 21 C 1.38021 * 119.87902 * 179.71926 * 20 19 18 22 22 C 1.38311 * 120.11924 * 0.55446 * 21 20 19 23 23 C 1.38316 * 120.24729 * 359.71936 * 22 21 20 24 24 C 1.38032 * 120.11358 * 0.02562 * 23 22 21 25 25 N 1.31620 * 107.92560 * 359.73979 * 18 14 13 26 26 C 1.53779 * 113.61602 * 210.00203 * 3 2 1 27 27 H 1.08997 * 109.47697 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.46823 * 300.00595 * 1 2 3 29 29 H 1.09007 * 109.46899 * 60.00152 * 1 2 3 30 30 H 1.09001 * 113.61338 * 25.42966 * 5 3 2 31 31 H 1.09000 * 113.61355 * 254.53230 * 5 3 2 32 32 H 0.97001 * 120.00384 * 72.50320 * 8 6 5 33 33 H 1.08998 * 109.46954 * 300.00581 * 11 9 8 34 34 H 1.09002 * 109.46946 * 59.99717 * 11 9 8 35 35 H 1.08000 * 126.00845 * 359.96693 * 13 12 11 36 36 H 1.08995 * 109.47273 * 135.26552 * 15 14 13 37 37 H 0.96693 * 114.00217 * 59.99504 * 16 15 14 38 38 H 1.48498 * 109.99763 * 58.68360 * 17 15 14 39 39 H 1.48501 * 109.99656 * 179.97438 * 17 15 14 40 40 H 1.08000 * 120.05948 * 359.96720 * 20 19 18 41 41 H 1.08003 * 119.93909 * 180.27479 * 21 20 19 42 42 H 1.08007 * 119.88045 * 179.69832 * 22 21 20 43 43 H 1.07994 * 119.94467 * 179.97438 * 23 22 21 44 44 H 1.07998 * 120.05500 * 179.97438 * 24 23 22 45 45 H 1.08997 * 113.61777 * 105.46356 * 26 3 2 46 46 H 1.08999 * 113.61498 * 334.55851 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3143 2.0797 -0.3228 5 6 2.7535 1.6488 1.3017 6 6 3.8229 2.3180 0.4222 7 1 3.6237 3.3693 0.2142 8 7 5.1935 2.0783 0.8804 9 6 5.8972 3.0758 1.4517 10 8 5.3938 4.1704 1.5912 11 6 7.3094 2.8311 1.9174 12 7 7.8521 4.0615 2.4985 13 6 8.3743 4.1896 3.7373 14 6 8.7667 5.4727 3.8938 15 6 9.4085 6.0607 5.1239 16 8 8.4511 6.8545 5.8276 17 14 10.0077 4.6858 6.2291 18 6 8.4644 6.1645 2.7047 19 6 8.7219 7.6024 2.4416 20 6 8.5993 8.5343 3.4700 21 6 8.8455 9.8693 3.2210 22 6 9.2023 10.2842 1.9508 23 6 9.3200 9.3641 0.9247 24 6 9.0812 8.0258 1.1638 25 7 7.9140 5.3106 1.8679 26 6 3.3756 1.3717 -0.7045 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 3.1166 0.7740 1.8411 31 1 2.2142 2.3477 1.9411 32 1 5.5962 1.2029 0.7688 33 1 7.3123 2.0423 2.6696 34 1 7.9239 2.5272 1.0699 35 1 8.4645 3.4039 4.4727 36 1 10.2525 6.6848 4.8303 37 1 7.6713 6.3630 6.1198 38 1 10.9802 3.8341 5.4984 39 1 10.6433 5.2526 7.4456 40 1 8.3159 8.2120 4.4610 41 1 8.7551 10.5920 4.0186 42 1 9.3894 11.3305 1.7592 43 1 9.5985 9.6935 -0.0654 44 1 9.1729 7.3083 0.3618 45 1 3.3385 1.8468 -1.6848 46 1 3.9089 0.4211 -0.7137 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_12622748.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:23 Heat of formation + Delta-G solvation = 35.592160 kcal Electronic energy + Delta-G solvation = -29322.418522 eV Core-core repulsion = 25182.019429 eV Total energy + Delta-G solvation = -4140.399093 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.42951 -41.24667 -39.90001 -39.49507 -37.74475 -37.31080 -34.78349 -34.19182 -32.20354 -31.67599 -31.26531 -28.92162 -27.83420 -26.88492 -26.05196 -25.02431 -23.76707 -23.27071 -21.85356 -21.46584 -21.18508 -20.75914 -18.73525 -18.42672 -18.18354 -17.64197 -17.13473 -16.78710 -16.77289 -16.42736 -16.19538 -15.99132 -15.86817 -15.62360 -15.41998 -15.14148 -15.01956 -14.61261 -14.34993 -14.15554 -14.01973 -13.91025 -13.71672 -13.61443 -13.43618 -13.23087 -12.87900 -12.39358 -12.31038 -12.28619 -12.22287 -11.96723 -11.94221 -11.81177 -11.41046 -11.17135 -10.58457 -10.53644 -10.24546 -10.16853 -9.65295 -9.60949 -9.13063 -5.06365 0.29015 0.72287 0.84730 1.22426 1.37030 1.42667 1.63956 1.91063 1.96755 2.01416 2.79223 3.12154 3.28024 3.32548 3.41652 3.51524 3.55548 3.63916 3.68916 3.76038 3.76268 3.85491 4.15546 4.19916 4.25876 4.28991 4.37313 4.38993 4.46605 4.51113 4.58601 4.59590 4.66322 4.69774 4.79647 4.80855 4.85104 4.88245 4.93178 4.96852 5.18869 5.34600 5.39237 5.48023 5.79234 5.82452 5.85822 5.88508 6.13713 6.27249 6.29868 6.67356 6.73457 7.04900 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.375 6.375 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.168 4.168 6 C 0.126 3.874 7 H 0.119 0.881 8 N -0.717 5.717 9 C 0.500 3.500 10 O -0.503 6.503 11 C 0.116 3.884 12 N -0.358 5.358 13 C 0.064 3.936 14 C -0.252 4.252 15 C -0.027 4.027 16 O -0.540 6.540 17 Si 0.685 3.315 18 C 0.133 3.867 19 C -0.022 4.022 20 C -0.099 4.099 21 C -0.125 4.125 22 C -0.112 4.112 23 C -0.127 4.127 24 C -0.093 4.093 25 N -0.250 5.250 26 C -0.144 4.144 27 H 0.087 0.913 28 H 0.043 0.957 29 H 0.044 0.956 30 H 0.095 0.905 31 H 0.076 0.924 32 H 0.403 0.597 33 H 0.130 0.870 34 H 0.118 0.882 35 H 0.181 0.819 36 H 0.113 0.887 37 H 0.378 0.622 38 H -0.256 1.256 39 H -0.254 1.254 40 H 0.157 0.843 41 H 0.125 0.875 42 H 0.122 0.878 43 H 0.123 0.877 44 H 0.122 0.878 45 H 0.082 0.918 46 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.794 -6.329 0.729 6.619 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.207 4.207 6 C 0.021 3.979 7 H 0.137 0.863 8 N -0.370 5.370 9 C 0.283 3.717 10 O -0.375 6.375 11 C -0.010 4.010 12 N -0.140 5.140 13 C -0.081 4.081 14 C -0.264 4.264 15 C -0.139 4.139 16 O -0.346 6.346 17 Si 0.587 3.413 18 C -0.033 4.033 19 C -0.024 4.024 20 C -0.118 4.118 21 C -0.143 4.143 22 C -0.131 4.131 23 C -0.145 4.145 24 C -0.112 4.112 25 N -0.071 5.071 26 C -0.182 4.182 27 H 0.106 0.894 28 H 0.062 0.938 29 H 0.062 0.938 30 H 0.113 0.887 31 H 0.094 0.906 32 H 0.238 0.762 33 H 0.148 0.852 34 H 0.136 0.864 35 H 0.197 0.803 36 H 0.130 0.870 37 H 0.226 0.774 38 H -0.181 1.181 39 H -0.178 1.178 40 H 0.174 0.826 41 H 0.143 0.857 42 H 0.140 0.860 43 H 0.141 0.859 44 H 0.140 0.860 45 H 0.101 0.899 46 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -1.486 -5.952 -0.104 6.136 hybrid contribution 0.346 0.090 0.088 0.368 sum -1.140 -5.862 -0.015 5.972 Atomic orbital electron populations 1.22836 0.80671 1.03103 1.00191 1.87933 1.20076 1.26802 1.94561 1.23444 0.93771 0.85858 0.96429 0.88927 1.24013 0.97436 1.01382 0.97833 1.22211 0.80147 1.00600 0.94912 0.86301 1.45815 1.14910 1.14025 1.62265 1.20578 0.87523 0.85034 0.78532 1.90839 1.70113 1.23283 1.53299 1.21518 0.93272 0.84127 1.02082 1.47845 1.47250 1.07873 1.11026 1.22215 0.99017 0.98230 0.88589 1.20434 1.13828 0.93320 0.98793 1.24294 0.94299 1.02201 0.93138 1.86378 1.34158 1.39154 1.74865 0.95281 0.86113 0.80248 0.79698 1.20633 0.97449 0.93318 0.91872 1.17802 1.02138 0.88301 0.94179 1.21942 0.97163 0.92351 1.00373 1.21142 1.00298 0.95868 0.97016 1.21294 0.98883 0.99642 0.93274 1.21075 1.01136 0.92956 0.99382 1.21216 0.98135 0.96074 0.95761 1.77791 1.20835 0.88298 1.20136 1.23630 0.95709 1.00348 0.98509 0.89417 0.93818 0.93780 0.88658 0.90572 0.76166 0.85249 0.86421 0.80267 0.86970 0.77401 1.18110 1.17815 0.82624 0.85725 0.86017 0.85871 0.85976 0.89914 0.88398 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.27 10.71 -35.23 -0.38 -0.65 16 3 C 0.06 -0.07 4.31 -25.92 -0.11 -0.18 16 4 H 0.09 -0.18 7.87 -51.93 -0.41 -0.59 16 5 C -0.17 0.19 7.71 -25.92 -0.20 -0.01 16 6 C 0.13 -0.14 4.24 -67.12 -0.28 -0.43 16 7 H 0.12 0.09 7.46 -51.93 -0.39 -0.30 16 8 N -0.72 1.65 5.35 -53.02 -0.28 1.37 16 9 C 0.50 0.20 7.86 -10.98 -0.09 0.11 16 10 O -0.50 -2.90 15.30 5.55 0.08 -2.81 16 11 C 0.12 -0.29 6.99 -5.20 -0.04 -0.33 16 12 N -0.36 -0.54 3.40 -62.59 -0.21 -0.76 16 13 C 0.06 -0.01 9.96 -17.26 -0.17 -0.19 16 14 C -0.25 -0.46 5.34 -104.76 -0.56 -1.02 16 15 C -0.03 -0.01 2.01 36.01 0.07 0.06 16 16 O -0.54 -0.14 10.10 -35.23 -0.36 -0.49 16 17 Si 0.68 -0.98 30.74 -169.99 -5.23 -6.20 16 18 C 0.13 0.63 6.74 -82.78 -0.56 0.08 16 19 C -0.02 -0.11 5.80 -104.90 -0.61 -0.72 16 20 C -0.10 -0.40 8.94 -39.26 -0.35 -0.75 16 21 C -0.13 -0.38 10.03 -39.63 -0.40 -0.78 16 22 C -0.11 -0.30 10.04 -39.53 -0.40 -0.69 16 23 C -0.13 -0.39 10.04 -39.63 -0.40 -0.79 16 24 C -0.09 -0.41 9.75 -39.25 -0.38 -0.79 16 25 N -0.25 -1.34 11.63 33.43 0.39 -0.95 16 26 C -0.14 0.29 7.66 -25.92 -0.20 0.09 16 27 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 28 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.04 -0.09 8.14 -51.92 -0.42 -0.51 16 30 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.40 -2.20 8.73 -40.82 -0.36 -2.56 16 33 H 0.13 -0.88 8.07 -51.93 -0.42 -1.30 16 34 H 0.12 -0.52 8.14 -51.93 -0.42 -0.94 16 35 H 0.18 -0.85 6.41 -52.49 -0.34 -1.19 16 36 H 0.11 0.19 7.84 -51.93 -0.41 -0.22 16 37 H 0.38 -1.24 8.70 45.56 0.40 -0.84 16 38 H -0.26 -0.25 7.11 56.52 0.40 0.16 16 39 H -0.25 -0.50 7.11 56.52 0.40 -0.09 16 40 H 0.16 0.54 4.53 -52.49 -0.24 0.30 16 41 H 0.12 0.14 8.06 -52.48 -0.42 -0.28 16 42 H 0.12 0.06 8.06 -52.48 -0.42 -0.36 16 43 H 0.12 0.13 8.06 -52.49 -0.42 -0.29 16 44 H 0.12 0.49 8.06 -52.49 -0.42 0.07 16 45 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 46 H 0.10 -0.24 8.12 -51.93 -0.42 -0.66 16 LS Contribution 386.66 15.07 5.83 5.83 Total: 0.00 -12.11 386.66 -10.15 -22.26 By element: Atomic # 1 Polarization: -5.89 SS G_CDS: -6.43 Total: -12.32 kcal Atomic # 6 Polarization: -1.70 SS G_CDS: -3.57 Total: -5.27 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -0.11 Total: -0.34 kcal Atomic # 8 Polarization: -3.31 SS G_CDS: -0.65 Total: -3.96 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.23 Total: -6.20 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -12.11 -10.15 -22.26 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12622748.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.853 kcal (2) G-P(sol) polarization free energy of solvation -12.107 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.746 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.261 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.592 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds