Wall clock time and date at job start Mon Mar 8 2021 04:09:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42899 * 114.00647 * 2 1 4 4 H 1.09005 * 112.90173 * 341.24897 * 3 2 1 5 5 C 1.53777 * 113.61908 * 112.49969 * 3 2 1 6 6 C 1.53778 * 87.08221 * 139.98238 * 5 3 2 7 7 H 1.09002 * 113.68900 * 89.12517 * 6 5 3 8 8 N 1.46498 * 113.61220 * 220.02018 * 6 5 3 9 9 C 1.34777 * 119.99828 * 252.21874 * 8 6 5 10 10 O 1.21283 * 120.00222 * 0.28168 * 9 8 6 11 11 C 1.50703 * 120.00290 * 180.27728 * 9 8 6 12 12 N 1.46492 * 109.47441 * 180.02562 * 11 9 8 13 13 C 1.35041 * 125.93318 * 124.71837 * 12 11 9 14 14 C 1.35085 * 107.98213 * 179.83718 * 13 12 11 15 15 C 1.50699 * 126.07901 * 180.19720 * 14 13 12 16 16 O 1.42901 * 109.47028 * 255.26863 * 15 14 13 17 17 Si 1.86303 * 109.46810 * 15.26296 * 15 14 13 18 18 C 1.40850 * 107.84464 * 0.42127 * 14 13 12 19 19 C 1.48420 * 126.03451 * 179.77050 * 18 14 13 20 20 C 1.39318 * 120.12379 * 324.71397 * 19 18 14 21 21 C 1.38021 * 119.87902 * 179.71926 * 20 19 18 22 22 C 1.38311 * 120.11924 * 0.55446 * 21 20 19 23 23 C 1.38316 * 120.24729 * 359.71936 * 22 21 20 24 24 C 1.38032 * 120.11358 * 0.02562 * 23 22 21 25 25 N 1.31620 * 107.92560 * 359.73979 * 18 14 13 26 26 C 1.53779 * 113.61602 * 210.00203 * 3 2 1 27 27 H 1.08997 * 109.47697 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.46823 * 300.00595 * 1 2 3 29 29 H 1.09007 * 109.46899 * 60.00152 * 1 2 3 30 30 H 1.09001 * 113.61338 * 25.42966 * 5 3 2 31 31 H 1.09000 * 113.61355 * 254.53230 * 5 3 2 32 32 H 0.97001 * 120.00384 * 72.50320 * 8 6 5 33 33 H 1.08998 * 109.46954 * 300.00581 * 11 9 8 34 34 H 1.09002 * 109.46946 * 59.99717 * 11 9 8 35 35 H 1.08000 * 126.00845 * 359.96693 * 13 12 11 36 36 H 1.08995 * 109.47273 * 135.26552 * 15 14 13 37 37 H 0.96693 * 114.00217 * 59.99504 * 16 15 14 38 38 H 1.48498 * 109.99763 * 58.68360 * 17 15 14 39 39 H 1.48501 * 109.99656 * 179.97438 * 17 15 14 40 40 H 1.08000 * 120.05948 * 359.96720 * 20 19 18 41 41 H 1.08003 * 119.93909 * 180.27479 * 21 20 19 42 42 H 1.08007 * 119.88045 * 179.69832 * 22 21 20 43 43 H 1.07994 * 119.94467 * 179.97438 * 23 22 21 44 44 H 1.07998 * 120.05500 * 179.97438 * 24 23 22 45 45 H 1.08997 * 113.61777 * 105.46356 * 26 3 2 46 46 H 1.08999 * 113.61498 * 334.55851 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3143 2.0797 -0.3228 5 6 2.7535 1.6488 1.3017 6 6 3.8229 2.3180 0.4222 7 1 3.6237 3.3693 0.2142 8 7 5.1935 2.0783 0.8804 9 6 5.8972 3.0758 1.4517 10 8 5.3938 4.1704 1.5912 11 6 7.3094 2.8311 1.9174 12 7 7.8521 4.0615 2.4985 13 6 8.3743 4.1896 3.7373 14 6 8.7667 5.4727 3.8938 15 6 9.4085 6.0607 5.1239 16 8 8.4511 6.8545 5.8276 17 14 10.0077 4.6858 6.2291 18 6 8.4644 6.1645 2.7047 19 6 8.7219 7.6024 2.4416 20 6 8.5993 8.5343 3.4700 21 6 8.8455 9.8693 3.2210 22 6 9.2023 10.2842 1.9508 23 6 9.3200 9.3641 0.9247 24 6 9.0812 8.0258 1.1638 25 7 7.9140 5.3106 1.8679 26 6 3.3756 1.3717 -0.7045 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 3.1166 0.7740 1.8411 31 1 2.2142 2.3477 1.9411 32 1 5.5962 1.2029 0.7688 33 1 7.3123 2.0423 2.6696 34 1 7.9239 2.5272 1.0699 35 1 8.4645 3.4039 4.4727 36 1 10.2525 6.6848 4.8303 37 1 7.6713 6.3630 6.1198 38 1 10.9802 3.8341 5.4984 39 1 10.6433 5.2526 7.4456 40 1 8.3159 8.2120 4.4610 41 1 8.7551 10.5920 4.0186 42 1 9.3894 11.3305 1.7592 43 1 9.5985 9.6935 -0.0654 44 1 9.1729 7.3083 0.3618 45 1 3.3385 1.8468 -1.6848 46 1 3.9089 0.4211 -0.7137 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_12622748.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:22 Heat of formation + Delta-G solvation = 32.080122 kcal Electronic energy + Delta-G solvation = -29322.570816 eV Core-core repulsion = 25182.019429 eV Total energy + Delta-G solvation = -4140.551387 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.48488 -41.21731 -39.96576 -39.63733 -37.74273 -37.28117 -34.83046 -34.17967 -32.28660 -31.87485 -31.40527 -28.92039 -27.73224 -26.78150 -26.06372 -25.04324 -23.86238 -23.48379 -21.87447 -21.48535 -21.16199 -20.82109 -18.73489 -18.38632 -18.14587 -17.74247 -17.11745 -16.76273 -16.73590 -16.49016 -16.19364 -15.97305 -15.90588 -15.79410 -15.43833 -15.16906 -14.99636 -14.67656 -14.40747 -14.23094 -14.13925 -13.92930 -13.73051 -13.55952 -13.48489 -13.19588 -12.78073 -12.46098 -12.39020 -12.22849 -12.15995 -12.13286 -11.89325 -11.88183 -11.54666 -11.26164 -10.65989 -10.49711 -10.24608 -10.12510 -9.88964 -9.74701 -9.28892 -4.96522 0.06013 0.45961 0.84162 1.30613 1.44061 1.46607 1.66394 1.79847 2.06010 2.07409 2.88436 2.90316 3.37203 3.40713 3.51039 3.58677 3.63306 3.73281 3.78305 3.86115 3.97543 4.01814 4.11509 4.14394 4.18953 4.28336 4.33690 4.43845 4.49912 4.52109 4.53005 4.61963 4.70541 4.70967 4.80214 4.83979 4.84191 4.92425 4.93875 4.99368 5.01028 5.16955 5.31004 5.44382 5.55546 5.61070 5.63681 5.94299 6.04827 6.22778 6.46343 6.61463 6.87431 7.15593 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.394 6.394 3 C 0.058 3.942 4 H 0.097 0.903 5 C -0.162 4.162 6 C 0.125 3.875 7 H 0.094 0.906 8 N -0.700 5.700 9 C 0.497 3.503 10 O -0.566 6.566 11 C 0.110 3.890 12 N -0.360 5.360 13 C 0.080 3.920 14 C -0.270 4.270 15 C -0.041 4.041 16 O -0.554 6.554 17 Si 0.804 3.196 18 C 0.107 3.893 19 C -0.040 4.040 20 C -0.112 4.112 21 C -0.131 4.131 22 C -0.118 4.118 23 C -0.132 4.132 24 C -0.113 4.113 25 N -0.297 5.297 26 C -0.133 4.133 27 H 0.094 0.906 28 H 0.047 0.953 29 H 0.050 0.950 30 H 0.100 0.900 31 H 0.066 0.934 32 H 0.422 0.578 33 H 0.183 0.817 34 H 0.140 0.860 35 H 0.230 0.770 36 H 0.090 0.910 37 H 0.393 0.607 38 H -0.281 1.281 39 H -0.302 1.302 40 H 0.158 0.842 41 H 0.143 0.857 42 H 0.146 0.854 43 H 0.141 0.859 44 H 0.116 0.884 45 H 0.085 0.915 46 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.514 -8.326 1.402 8.578 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.313 6.313 3 C 0.000 4.000 4 H 0.115 0.885 5 C -0.201 4.201 6 C 0.019 3.981 7 H 0.112 0.888 8 N -0.354 5.354 9 C 0.283 3.717 10 O -0.443 6.443 11 C -0.014 4.014 12 N -0.141 5.141 13 C -0.066 4.066 14 C -0.281 4.281 15 C -0.151 4.151 16 O -0.362 6.362 17 Si 0.708 3.292 18 C -0.058 4.058 19 C -0.042 4.042 20 C -0.131 4.131 21 C -0.149 4.149 22 C -0.136 4.136 23 C -0.150 4.150 24 C -0.132 4.132 25 N -0.119 5.119 26 C -0.171 4.171 27 H 0.113 0.887 28 H 0.065 0.935 29 H 0.068 0.932 30 H 0.118 0.882 31 H 0.084 0.916 32 H 0.260 0.740 33 H 0.201 0.799 34 H 0.158 0.842 35 H 0.246 0.754 36 H 0.108 0.892 37 H 0.243 0.757 38 H -0.208 1.208 39 H -0.230 1.230 40 H 0.175 0.825 41 H 0.160 0.840 42 H 0.163 0.837 43 H 0.159 0.841 44 H 0.134 0.866 45 H 0.103 0.897 46 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -1.235 -7.984 0.525 8.096 hybrid contribution 0.221 0.706 -0.146 0.754 sum -1.014 -7.278 0.379 7.358 Atomic orbital electron populations 1.22955 0.79894 1.03756 1.00685 1.87895 1.21086 1.27597 1.94685 1.23550 0.94271 0.85544 0.96644 0.88527 1.23955 0.97255 1.01159 0.97703 1.22048 0.80887 0.99526 0.95632 0.88752 1.45687 1.14273 1.14476 1.60931 1.21143 0.88574 0.84319 0.77691 1.90824 1.71654 1.25776 1.56022 1.22014 0.91085 0.83689 1.04606 1.48154 1.46781 1.07717 1.11488 1.22917 0.96659 0.98502 0.88486 1.20658 1.14888 0.94155 0.98444 1.24616 0.93768 1.03048 0.93654 1.86327 1.34967 1.40155 1.74793 0.94002 0.83371 0.76963 0.74816 1.20864 0.98242 0.93372 0.93319 1.18091 1.02269 0.89246 0.94548 1.22073 0.97793 0.92873 1.00394 1.21441 0.99761 0.95843 0.97880 1.21597 0.98340 1.00748 0.92906 1.21348 1.00623 0.92519 1.00505 1.21322 0.99339 0.96779 0.95748 1.77682 1.22192 0.90194 1.21802 1.23570 0.95026 1.00388 0.98122 0.88738 0.93478 0.93170 0.88176 0.91560 0.73974 0.79941 0.84226 0.75387 0.89212 0.75656 1.20767 1.22992 0.82520 0.83952 0.83653 0.84080 0.86637 0.89677 0.87345 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.39 -0.48 10.71 -148.98 -1.60 -2.08 16 3 C 0.06 -0.11 4.31 31.12 0.13 0.02 16 4 H 0.10 -0.30 7.87 -2.38 -0.02 -0.32 16 5 C -0.16 0.32 7.71 31.12 0.24 0.56 16 6 C 0.12 -0.22 4.24 45.52 0.19 -0.03 16 7 H 0.09 0.35 7.46 -2.39 -0.02 0.34 16 8 N -0.70 3.66 5.35 -440.04 -2.36 1.30 16 9 C 0.50 0.36 7.86 87.66 0.69 1.05 16 10 O -0.57 -7.55 15.30 -3.04 -0.05 -7.60 16 11 C 0.11 -0.75 6.99 85.64 0.60 -0.16 16 12 N -0.36 -0.93 3.40 -351.92 -1.20 -2.13 16 13 C 0.08 -0.14 9.96 83.47 0.83 0.69 16 14 C -0.27 -1.15 5.34 -19.95 -0.11 -1.26 16 15 C -0.04 -0.07 2.01 71.24 0.14 0.08 16 16 O -0.55 -0.76 10.10 -148.98 -1.50 -2.27 16 17 Si 0.80 -3.12 30.74 68.60 2.11 -1.01 16 18 C 0.11 1.25 6.74 42.53 0.29 1.54 16 19 C -0.04 -0.50 5.80 -20.04 -0.12 -0.62 16 20 C -0.11 -1.16 8.94 22.48 0.20 -0.96 16 21 C -0.13 -0.96 10.03 22.24 0.22 -0.73 16 22 C -0.12 -0.71 10.04 22.31 0.22 -0.49 16 23 C -0.13 -1.01 10.04 22.24 0.22 -0.79 16 24 C -0.11 -1.31 9.75 22.48 0.22 -1.09 16 25 N -0.30 -3.73 11.63 -48.15 -0.56 -4.29 16 26 C -0.13 0.57 7.66 31.12 0.24 0.80 16 27 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 28 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 29 H 0.05 -0.21 8.14 -2.38 -0.02 -0.23 16 30 H 0.10 -0.29 8.14 -2.39 -0.02 -0.31 16 31 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 32 H 0.42 -5.40 8.73 -92.71 -0.81 -6.21 16 33 H 0.18 -3.29 8.07 -2.39 -0.02 -3.31 16 34 H 0.14 -1.54 8.14 -2.39 -0.02 -1.56 16 35 H 0.23 -3.04 6.41 -2.91 -0.02 -3.06 16 36 H 0.09 0.49 7.84 -2.39 -0.02 0.47 16 37 H 0.39 -2.52 8.70 -74.06 -0.64 -3.16 16 38 H -0.28 -0.08 7.11 99.48 0.71 0.62 16 39 H -0.30 -1.25 7.11 99.48 0.71 -0.54 16 40 H 0.16 1.45 4.53 -2.91 -0.01 1.44 16 41 H 0.14 0.39 8.06 -2.91 -0.02 0.37 16 42 H 0.15 0.09 8.06 -2.91 -0.02 0.07 16 43 H 0.14 0.42 8.06 -2.91 -0.02 0.40 16 44 H 0.12 1.34 8.06 -2.91 -0.02 1.32 16 45 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 46 H 0.11 -0.67 8.12 -2.39 -0.02 -0.69 16 Total: 0.00 -33.61 386.66 -0.10 -33.71 By element: Atomic # 1 Polarization: -15.04 SS G_CDS: -0.40 Total: -15.43 kcal Atomic # 6 Polarization: -5.66 SS G_CDS: 5.45 Total: -0.21 kcal Atomic # 7 Polarization: -1.00 SS G_CDS: -4.11 Total: -5.11 kcal Atomic # 8 Polarization: -8.80 SS G_CDS: -3.15 Total: -11.95 kcal Atomic # 14 Polarization: -3.12 SS G_CDS: 2.11 Total: -1.01 kcal Total: -33.61 -0.10 -33.71 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12622748.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.790 kcal (2) G-P(sol) polarization free energy of solvation -33.615 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.175 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.095 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.710 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.080 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds