Wall clock time and date at job start Mon Mar 8 2021 04:09:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35889 * 116.99480 * 2 1 4 4 C 1.38818 * 119.93231 * 179.97438 * 3 2 1 5 5 C 1.37923 * 120.06167 * 180.23398 * 4 3 2 6 6 C 1.39356 * 119.93632 * 359.50337 * 5 4 3 7 7 C 1.48413 * 120.06640 * 180.25297 * 6 5 4 8 8 N 1.31617 * 126.03688 * 223.34726 * 7 6 5 9 9 N 1.40078 * 108.10560 * 179.90521 * 8 7 6 10 10 C 1.46498 * 125.92834 * 180.11972 * 9 8 7 11 11 C 1.50697 * 109.47581 * 305.28252 * 10 9 8 12 12 O 1.21276 * 119.99796 * 359.97438 * 11 10 9 13 13 N 1.34779 * 120.00175 * 179.97438 * 11 10 9 14 14 C 1.46493 * 119.99929 * 179.97438 * 13 11 10 15 15 H 1.08996 * 112.85168 * 336.20005 * 14 13 11 16 16 C 1.53779 * 113.61343 * 107.50942 * 14 13 11 17 17 C 1.53780 * 87.08491 * 139.98161 * 16 14 13 18 18 H 1.08998 * 113.61779 * 89.11350 * 17 16 14 19 19 O 1.42897 * 113.61483 * 220.01811 * 17 16 14 20 20 C 1.42898 * 114.00291 * 247.49356 * 19 17 16 21 21 C 1.53786 * 113.61260 * 205.00344 * 14 13 11 22 22 C 1.35034 * 108.13984 * 0.36162 * 9 8 7 23 23 C 1.35086 * 107.98064 * 359.78368 * 22 9 8 24 24 C 1.50703 * 126.07575 * 180.02562 * 23 22 9 25 25 O 1.42898 * 109.46915 * 104.01461 * 24 23 22 26 26 Si 1.86301 * 109.46986 * 344.01641 * 24 23 22 27 27 C 1.39352 * 119.87303 * 0.50078 * 6 5 4 28 28 C 1.37929 * 119.93101 * 359.75076 * 27 6 5 29 29 H 1.08994 * 109.47306 * 59.99661 * 1 2 3 30 30 H 1.09001 * 109.46925 * 179.97438 * 1 2 3 31 31 H 1.08999 * 109.47178 * 299.98883 * 1 2 3 32 32 H 1.07995 * 119.97026 * 359.96756 * 4 3 2 33 33 H 1.08000 * 120.03414 * 179.73146 * 5 4 3 34 34 H 1.09004 * 109.46758 * 65.28157 * 10 9 8 35 35 H 1.09000 * 109.47054 * 185.27292 * 10 9 8 36 36 H 0.96996 * 119.99354 * 0.02562 * 13 11 10 37 37 H 1.09004 * 113.61189 * 254.52443 * 16 14 13 38 38 H 1.08997 * 113.61610 * 25.42832 * 16 14 13 39 39 H 1.08999 * 109.46903 * 60.00073 * 20 19 17 40 40 H 1.08998 * 109.47412 * 179.97438 * 20 19 17 41 41 H 1.08998 * 109.46899 * 300.00058 * 20 19 17 42 42 H 1.09005 * 113.61463 * 334.56874 * 21 14 13 43 43 H 1.09001 * 113.61217 * 105.38697 * 21 14 13 44 44 H 1.07996 * 126.01112 * 179.76292 * 22 9 8 45 45 H 1.09000 * 109.46914 * 224.01554 * 24 23 22 46 46 H 0.96699 * 114.00365 * 300.00095 * 25 24 23 47 47 H 1.48496 * 109.99829 * 58.67953 * 26 24 23 48 48 H 1.48505 * 109.99743 * 180.02562 * 26 24 23 49 49 H 1.07997 * 120.03866 * 179.73008 * 27 6 5 50 50 H 1.08004 * 119.96305 * 179.97438 * 28 27 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0458 1.2108 0.0000 4 6 3.4322 1.2820 0.0005 5 6 4.0610 2.5095 0.0054 6 6 3.3033 3.6791 -0.0007 7 6 3.9770 5.0015 -0.0011 8 7 3.6357 6.0446 0.7254 9 7 4.5227 7.0883 0.4321 10 6 4.4994 8.4281 1.0241 11 6 3.1347 9.0381 0.8332 12 8 2.2671 8.4152 0.2587 13 7 2.8783 10.2759 1.3009 14 6 1.5518 10.8690 1.1147 15 1 1.0103 10.4390 0.2722 16 6 0.7235 10.9438 2.4082 17 6 0.2539 12.3294 1.9344 18 1 -0.6436 12.2986 1.3167 19 8 0.1743 13.2965 2.9834 20 6 -1.1575 13.7157 3.2876 21 6 1.5579 12.4068 1.1229 22 6 5.3997 6.6468 -0.4949 23 6 5.0907 5.3638 -0.7836 24 6 5.8101 4.4775 -1.7675 25 8 6.6313 3.5474 -1.0587 26 14 6.8759 5.5235 -2.8815 27 6 1.9118 3.6046 -0.0011 28 6 1.2884 2.3741 -0.0007 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5136 0.8901 32 1 4.0189 0.3753 0.0015 33 1 5.1396 2.5643 0.0102 34 1 4.7205 8.3586 2.0893 35 1 5.2482 9.0533 0.5378 36 1 3.5723 10.7742 1.7600 37 1 -0.0766 10.2051 2.4577 38 1 1.3295 10.9742 3.3137 39 1 -1.7475 12.8538 3.5993 40 1 -1.1324 14.4490 4.0936 41 1 -1.6085 14.1638 2.4022 42 1 2.3922 12.8372 1.6769 43 1 1.4331 12.8491 0.1345 44 1 6.2061 7.2188 -0.9294 45 1 5.0805 3.9342 -2.3679 46 1 7.3050 3.9617 -0.5023 47 1 7.8539 6.2938 -2.0719 48 1 7.5903 4.6612 -3.8569 49 1 1.3219 4.5092 -0.0014 50 1 0.2100 2.3158 -0.0006 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_12622750.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:27 Heat of formation + Delta-G solvation = 0.834320 kcal Electronic energy + Delta-G solvation = -33472.962865 eV Core-core repulsion = 28856.836747 eV Total energy + Delta-G solvation = -4616.126117 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -42.41070 -41.25550 -40.77428 -39.80660 -38.27239 -37.72256 -37.31156 -34.67124 -34.11512 -32.15012 -31.65406 -31.09863 -28.99461 -28.03836 -27.77693 -26.88173 -25.98763 -24.90136 -23.75411 -23.15935 -21.86318 -21.53344 -21.19880 -20.74548 -18.97373 -18.73681 -18.40577 -18.18090 -17.33895 -16.99152 -16.88626 -16.63620 -16.55123 -16.48938 -16.24550 -16.04636 -15.78110 -15.65878 -15.32444 -15.12886 -14.93636 -14.62875 -14.47829 -14.37746 -14.19574 -13.83142 -13.70881 -13.61013 -13.44578 -13.27791 -12.91256 -12.88009 -12.66360 -12.41315 -12.29478 -12.23725 -12.11176 -11.95790 -11.90566 -11.62572 -11.46806 -11.08608 -10.56907 -10.37563 -10.31215 -10.16849 -9.76178 -9.55257 -8.75735 -4.90964 0.34152 0.61923 0.86762 1.23485 1.38729 1.42627 1.58667 1.82676 1.98241 2.01975 2.45894 2.79433 3.02177 3.25247 3.35302 3.43367 3.50580 3.51808 3.66606 3.69867 3.75793 3.78009 3.86381 4.01845 4.13085 4.18632 4.22950 4.29325 4.31843 4.36936 4.39115 4.53323 4.58156 4.58338 4.59740 4.62394 4.65661 4.69612 4.80522 4.85121 4.86757 4.93209 4.95449 4.98372 5.28863 5.30343 5.34819 5.52278 5.73075 5.81097 5.87953 5.97910 6.13907 6.29677 6.53303 6.57057 6.75663 7.04462 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.317 6.317 3 C 0.135 3.865 4 C -0.156 4.156 5 C -0.051 4.051 6 C -0.059 4.059 7 C 0.140 3.860 8 N -0.251 5.251 9 N -0.359 5.359 10 C 0.116 3.884 11 C 0.501 3.499 12 O -0.503 6.503 13 N -0.717 5.717 14 C 0.127 3.873 15 H 0.119 0.881 16 C -0.168 4.168 17 C 0.064 3.936 18 H 0.093 0.907 19 O -0.376 6.376 20 C 0.028 3.972 21 C -0.143 4.143 22 C 0.060 3.940 23 C -0.248 4.248 24 C -0.033 4.033 25 O -0.529 6.529 26 Si 0.684 3.316 27 C -0.048 4.048 28 C -0.214 4.214 29 H 0.057 0.943 30 H 0.101 0.899 31 H 0.056 0.944 32 H 0.133 0.867 33 H 0.151 0.849 34 H 0.117 0.883 35 H 0.128 0.872 36 H 0.403 0.597 37 H 0.076 0.924 38 H 0.095 0.905 39 H 0.043 0.957 40 H 0.087 0.913 41 H 0.044 0.956 42 H 0.097 0.903 43 H 0.082 0.918 44 H 0.177 0.823 45 H 0.116 0.884 46 H 0.373 0.627 47 H -0.260 1.260 48 H -0.256 1.256 49 H 0.128 0.872 50 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.374 6.340 -0.050 6.351 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.230 6.230 3 C 0.090 3.910 4 C -0.174 4.174 5 C -0.070 4.070 6 C -0.061 4.061 7 C -0.026 4.026 8 N -0.072 5.072 9 N -0.140 5.140 10 C -0.010 4.010 11 C 0.285 3.715 12 O -0.376 6.376 13 N -0.370 5.370 14 C 0.022 3.978 15 H 0.137 0.863 16 C -0.207 4.207 17 C 0.005 3.995 18 H 0.111 0.889 19 O -0.294 6.294 20 C -0.068 4.068 21 C -0.182 4.182 22 C -0.084 4.084 23 C -0.260 4.260 24 C -0.145 4.145 25 O -0.335 6.335 26 Si 0.585 3.415 27 C -0.067 4.067 28 C -0.232 4.232 29 H 0.075 0.925 30 H 0.119 0.881 31 H 0.075 0.925 32 H 0.151 0.849 33 H 0.169 0.831 34 H 0.135 0.865 35 H 0.146 0.854 36 H 0.238 0.762 37 H 0.094 0.906 38 H 0.113 0.887 39 H 0.062 0.938 40 H 0.106 0.894 41 H 0.062 0.938 42 H 0.116 0.884 43 H 0.101 0.899 44 H 0.194 0.806 45 H 0.134 0.866 46 H 0.220 0.780 47 H -0.185 1.185 48 H -0.180 1.180 49 H 0.146 0.854 50 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -0.385 6.142 -0.043 6.155 hybrid contribution 0.770 -0.113 0.649 1.013 sum 0.385 6.029 0.605 6.072 Atomic orbital electron populations 1.23089 0.78183 1.04124 1.01506 1.86082 1.21576 1.26979 1.88393 1.19205 0.92470 0.84136 0.95225 1.20381 0.91152 0.98704 1.07193 1.21401 1.01284 0.89885 0.94427 1.17637 0.92301 0.89051 1.07120 1.20539 0.94274 0.92642 0.95152 1.77817 1.12320 0.94329 1.22698 1.47831 1.23725 1.09893 1.32597 1.21506 0.97207 0.80327 1.01950 1.20559 0.89953 0.81766 0.79265 1.90819 1.46560 1.60207 1.40013 1.45818 1.14555 1.16704 1.59966 1.22204 0.83712 0.92865 0.99033 0.86295 1.24017 1.00580 0.97266 0.98871 1.23447 0.97951 0.88583 0.89521 0.88928 1.87935 1.27542 1.59626 1.54278 1.22835 0.83694 0.99503 1.00765 1.23630 0.98576 0.94928 1.01022 1.22279 0.96664 0.95748 0.93738 1.20383 1.02776 0.95294 1.07508 1.24220 0.97577 0.95762 0.96907 1.86557 1.49045 1.34817 1.63117 0.95056 0.82021 0.82778 0.81658 1.21011 0.93397 0.97311 0.94995 1.21150 1.00158 0.92016 1.09922 0.92487 0.88103 0.92528 0.84870 0.83126 0.86483 0.85375 0.76174 0.90553 0.88682 0.93828 0.89422 0.93767 0.88417 0.89899 0.80596 0.86638 0.77953 1.18484 1.18007 0.85412 0.85230 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 9.81 101.05 0.99 0.99 16 2 O -0.32 -1.15 10.49 -19.39 -0.20 -1.36 16 3 C 0.14 0.54 6.69 -39.15 -0.26 0.28 16 4 C -0.16 -0.58 9.97 -39.48 -0.39 -0.98 16 5 C -0.05 -0.19 9.04 -39.28 -0.35 -0.54 16 6 C -0.06 -0.26 5.73 -104.88 -0.60 -0.86 16 7 C 0.14 0.61 6.66 -82.78 -0.55 0.05 16 8 N -0.25 -1.28 11.66 33.43 0.39 -0.89 16 9 N -0.36 -0.55 3.41 -62.59 -0.21 -0.76 16 10 C 0.12 -0.28 6.99 -5.20 -0.04 -0.31 16 11 C 0.50 0.16 7.86 -10.99 -0.09 0.07 16 12 O -0.50 -2.68 15.29 5.56 0.09 -2.60 16 13 N -0.72 1.68 5.35 -53.02 -0.28 1.39 16 14 C 0.13 -0.16 4.24 -67.12 -0.28 -0.45 16 15 H 0.12 0.03 7.46 -51.93 -0.39 -0.36 16 16 C -0.17 0.13 7.71 -25.92 -0.20 -0.07 16 17 C 0.06 -0.06 4.31 -25.92 -0.11 -0.18 16 18 H 0.09 -0.19 7.87 -51.93 -0.41 -0.60 16 19 O -0.38 -0.32 10.71 -35.23 -0.38 -0.70 16 20 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 21 C -0.14 0.33 7.66 -25.91 -0.20 0.13 16 22 C 0.06 0.00 9.96 -17.26 -0.17 -0.17 16 23 C -0.25 -0.42 5.34 -104.75 -0.56 -0.98 16 24 C -0.03 -0.02 2.18 36.01 0.08 0.06 16 25 O -0.53 -0.44 10.41 -35.23 -0.37 -0.81 16 26 Si 0.68 -0.76 30.84 -169.99 -5.24 -6.00 16 27 C -0.05 -0.20 9.77 -39.28 -0.38 -0.59 16 28 C -0.21 -0.71 9.02 -39.48 -0.36 -1.07 16 29 H 0.06 -0.04 7.65 -51.93 -0.40 -0.44 16 30 H 0.10 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.06 -0.04 7.66 -51.93 -0.40 -0.43 16 32 H 0.13 0.34 8.06 -52.49 -0.42 -0.08 16 33 H 0.15 0.45 5.35 -52.49 -0.28 0.17 16 34 H 0.12 -0.49 8.14 -51.93 -0.42 -0.91 16 35 H 0.13 -0.84 8.07 -51.93 -0.42 -1.25 16 36 H 0.40 -2.17 8.73 -40.82 -0.36 -2.53 16 37 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 38 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 39 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 40 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 41 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 42 H 0.10 -0.26 8.12 -51.93 -0.42 -0.68 16 43 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 44 H 0.18 -0.60 6.34 -52.49 -0.33 -0.93 16 45 H 0.12 0.11 7.96 -51.93 -0.41 -0.30 16 46 H 0.37 -0.77 8.70 45.56 0.40 -0.37 16 47 H -0.26 0.10 6.97 56.52 0.39 0.49 16 48 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 49 H 0.13 0.55 8.06 -52.49 -0.42 0.13 16 50 H 0.13 0.17 6.28 -52.48 -0.33 -0.16 16 LS Contribution 417.47 15.07 6.29 6.29 Total: 0.00 -11.67 417.47 -9.49 -21.16 By element: Atomic # 1 Polarization: -5.01 SS G_CDS: -7.18 Total: -12.19 kcal Atomic # 6 Polarization: -1.15 SS G_CDS: -2.39 Total: -3.54 kcal Atomic # 7 Polarization: -0.15 SS G_CDS: -0.11 Total: -0.26 kcal Atomic # 8 Polarization: -4.60 SS G_CDS: -0.86 Total: -5.46 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.24 Total: -6.00 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -11.67 -9.49 -21.16 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12622750.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.991 kcal (2) G-P(sol) polarization free energy of solvation -11.669 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.322 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.488 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.157 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.834 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds