Wall clock time and date at job start Mon Mar 8 2021 04:09:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42900 * 114.00297 * 2 1 4 4 H 1.08998 * 112.84754 * 18.80365 * 3 2 1 5 5 C 1.53774 * 113.61287 * 150.00068 * 3 2 1 6 6 C 1.53782 * 87.08431 * 140.06577 * 5 3 2 7 7 H 1.09003 * 113.61591 * 89.19300 * 6 5 3 8 8 N 1.46490 * 113.61929 * 220.01979 * 6 5 3 9 9 C 1.34779 * 120.00429 * 204.99769 * 8 6 5 10 10 O 1.21627 * 119.99319 * 359.97438 * 9 8 6 11 11 C 1.47284 * 120.00414 * 179.97438 * 9 8 6 12 12 C 1.40368 * 120.04862 * 179.97438 * 11 9 8 13 13 O 1.35679 * 120.13496 * 359.95523 * 12 11 9 14 14 C 1.38317 * 119.72790 * 179.97438 * 12 11 9 15 15 C 1.39565 * 119.81288 * 359.97438 * 14 12 11 16 16 C 1.47570 * 119.95598 * 180.02562 * 15 14 12 17 17 C 1.36105 * 125.94229 * 180.02562 * 16 15 14 18 18 C 1.40800 * 106.73149 * 179.97438 * 17 16 15 19 19 C 1.34828 * 107.04950 * 0.02562 * 18 17 16 20 20 C 1.50705 * 125.65415 * 179.97438 * 19 18 17 21 21 O 1.42897 * 109.46859 * 65.01093 * 20 19 18 22 22 Si 1.86296 * 109.47158 * 185.01393 * 20 19 18 23 23 O 1.34228 * 108.69468 * 359.97438 * 19 18 17 24 24 C 1.39962 * 120.09136 * 0.27655 * 15 14 12 25 25 C 1.36395 * 120.27693 * 359.44638 * 24 15 14 26 26 C 1.53786 * 113.69001 * 247.53740 * 3 2 1 27 27 H 1.08992 * 109.47192 * 179.97438 * 1 2 3 28 28 H 1.09003 * 109.46993 * 300.00039 * 1 2 3 29 29 H 1.09005 * 109.46892 * 59.99662 * 1 2 3 30 30 H 1.09000 * 113.62003 * 25.51614 * 5 3 2 31 31 H 1.09001 * 113.61843 * 254.61276 * 5 3 2 32 32 H 0.97000 * 120.00081 * 24.99494 * 8 6 5 33 33 H 0.96704 * 114.00131 * 270.02010 * 13 12 11 34 34 H 1.08002 * 120.09547 * 179.97438 * 14 12 11 35 35 H 1.08000 * 126.63644 * 359.73546 * 17 16 15 36 36 H 1.08003 * 126.47658 * 179.97438 * 18 17 16 37 37 H 1.08997 * 109.46928 * 305.01679 * 20 19 18 38 38 H 0.96706 * 113.99791 * 60.00933 * 21 20 19 39 39 H 1.48504 * 109.99796 * 58.68511 * 22 20 19 40 40 H 1.48498 * 109.99973 * 179.97438 * 22 20 19 41 41 H 1.07998 * 119.86420 * 179.70669 * 24 15 14 42 42 H 1.07996 * 119.91272 * 180.29758 * 25 24 15 43 43 H 1.08996 * 113.61410 * 105.46028 * 26 3 2 44 44 H 1.08999 * 113.61326 * 334.55248 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3139 2.0788 0.3238 5 6 3.3756 1.3717 0.7045 6 6 3.8222 2.3198 -0.4210 7 1 3.6223 3.3707 -0.2117 8 7 5.1929 2.0817 -0.8795 9 6 5.8940 3.0789 -1.4547 10 8 5.3882 4.1762 -1.5935 11 6 7.2723 2.8397 -1.9153 12 6 8.0031 3.8773 -2.5149 13 8 7.4421 5.1026 -2.6729 14 6 9.2973 3.6455 -2.9445 15 6 9.8677 2.3827 -2.7785 16 6 11.2485 2.1320 -3.2351 17 6 11.9214 0.9532 -3.1350 18 6 13.1966 1.1658 -3.6930 19 6 13.2401 2.4499 -4.1017 20 6 14.4166 3.1224 -4.7613 21 8 14.6613 2.5156 -6.0317 22 14 14.0443 4.9323 -4.9988 23 8 12.0621 3.0301 -3.8238 24 6 9.1303 1.3521 -2.1843 25 6 7.8558 1.5781 -1.7543 26 6 2.7532 1.6510 -1.3014 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 3.9095 0.4215 0.7125 31 1 3.3383 1.8456 1.6854 32 1 5.5962 1.2064 -0.7692 33 1 6.9730 5.2153 -3.5110 34 1 9.8648 4.4395 -3.4070 35 1 11.5506 0.0338 -2.7066 36 1 13.9901 0.4380 -3.7770 37 1 15.2985 3.0125 -4.1303 38 1 13.9170 2.5757 -6.6462 39 1 13.7568 5.5679 -3.6878 40 1 15.1970 5.6069 -5.6478 41 1 9.5737 0.3750 -2.0620 42 1 7.2938 0.7800 -1.2923 43 1 2.2134 2.3503 -1.9398 44 1 3.1169 0.7771 -1.8418 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_12807986.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:30 Heat of formation + Delta-G solvation = -70.659683 kcal Electronic energy + Delta-G solvation = -29008.502814 eV Core-core repulsion = 24668.058971 eV Total energy + Delta-G solvation = -4340.443843 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.134 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -43.76078 -41.65898 -40.62524 -39.25184 -38.13062 -37.83523 -37.18924 -34.56191 -34.15011 -33.09066 -31.32636 -30.49367 -27.94637 -27.16189 -26.81931 -25.32773 -24.16366 -23.97369 -22.43477 -21.90713 -21.33960 -21.15459 -19.69302 -18.72049 -18.54829 -18.23156 -17.72198 -17.41916 -17.05385 -16.67535 -16.61714 -16.27259 -16.22564 -15.85071 -15.79175 -15.75370 -15.17465 -15.00892 -14.73947 -14.34857 -14.21006 -14.04251 -13.89543 -13.68809 -13.61625 -13.55699 -13.38066 -12.88755 -12.82502 -12.76462 -12.22590 -12.18929 -12.12854 -11.94058 -11.80884 -11.14988 -10.77522 -10.75702 -10.60862 -10.52515 -10.06760 -9.97501 -9.03875 -5.08759 -0.80521 0.09242 0.63779 1.09235 1.38003 1.44177 1.73410 1.89390 1.95775 2.01348 2.61652 2.85210 2.99455 3.19575 3.32890 3.36977 3.48057 3.51877 3.63820 3.76011 3.80878 3.82774 3.88786 3.92304 4.13879 4.23452 4.24425 4.35196 4.40860 4.41958 4.55347 4.63180 4.64583 4.65376 4.72943 4.74647 4.80652 4.86366 4.90697 4.97723 4.99802 5.07538 5.15882 5.35793 5.42738 5.47309 5.93862 6.17835 6.33854 6.44160 6.67457 7.20280 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.145 4.145 6 C 0.126 3.874 7 H 0.121 0.879 8 N -0.716 5.716 9 C 0.560 3.440 10 O -0.518 6.518 11 C -0.166 4.166 12 C 0.179 3.821 13 O -0.474 6.474 14 C -0.141 4.141 15 C 0.031 3.969 16 C 0.023 3.977 17 C -0.177 4.177 18 C -0.174 4.174 19 C -0.045 4.045 20 C -0.028 4.028 21 O -0.530 6.530 22 Si 0.700 3.300 23 O -0.161 6.161 24 C -0.116 4.116 25 C -0.064 4.064 26 C -0.168 4.168 27 H 0.087 0.913 28 H 0.043 0.957 29 H 0.043 0.957 30 H 0.097 0.903 31 H 0.082 0.918 32 H 0.401 0.599 33 H 0.399 0.601 34 H 0.144 0.856 35 H 0.156 0.844 36 H 0.155 0.845 37 H 0.134 0.866 38 H 0.384 0.616 39 H -0.252 1.252 40 H -0.246 1.246 41 H 0.139 0.861 42 H 0.136 0.864 43 H 0.076 0.924 44 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.094 -3.675 -1.346 4.438 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.183 4.183 6 C 0.020 3.980 7 H 0.138 0.862 8 N -0.368 5.368 9 C 0.348 3.652 10 O -0.394 6.394 11 C -0.170 4.170 12 C 0.132 3.868 13 O -0.285 6.285 14 C -0.159 4.159 15 C 0.030 3.970 16 C -0.027 4.027 17 C -0.196 4.196 18 C -0.193 4.193 19 C -0.096 4.096 20 C -0.138 4.138 21 O -0.336 6.336 22 Si 0.600 3.400 23 O -0.058 6.058 24 C -0.134 4.134 25 C -0.083 4.083 26 C -0.207 4.207 27 H 0.105 0.895 28 H 0.062 0.938 29 H 0.062 0.938 30 H 0.115 0.885 31 H 0.101 0.899 32 H 0.236 0.764 33 H 0.258 0.742 34 H 0.162 0.838 35 H 0.174 0.826 36 H 0.173 0.827 37 H 0.151 0.849 38 H 0.232 0.768 39 H -0.176 1.176 40 H -0.170 1.170 41 H 0.157 0.843 42 H 0.154 0.846 43 H 0.095 0.905 44 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -1.393 -1.905 -0.496 2.412 hybrid contribution 0.039 -1.130 0.066 1.133 sum -1.354 -3.036 -0.429 3.352 Atomic orbital electron populations 1.22833 0.80718 1.03071 1.00167 1.87936 1.20036 1.26866 1.94563 1.23452 0.93753 0.85806 0.96483 0.88913 1.23633 0.95713 1.00370 0.98559 1.22213 0.80282 1.00612 0.94846 0.86160 1.45822 1.14831 1.14166 1.61989 1.18007 0.85043 0.84360 0.77813 1.90842 1.70510 1.23257 1.54770 1.20489 0.95175 0.94708 1.06593 1.18282 0.90528 0.84082 0.93865 1.84777 1.72590 1.27400 1.43782 1.21592 0.95460 0.96974 1.01907 1.17755 0.88320 0.93854 0.97075 1.20321 0.91328 0.88284 1.02738 1.21913 0.94550 0.98450 1.04708 1.21584 0.98724 0.96288 1.02702 1.22998 0.87089 0.94033 1.05431 1.24423 0.93856 1.09033 0.86536 1.86567 1.43098 1.81358 1.22530 0.94266 0.86656 0.73089 0.86025 1.83933 1.21804 1.39042 1.61054 1.20707 0.94232 0.99009 0.99478 1.20825 0.94880 0.95343 0.97211 1.24022 0.97459 1.01419 0.97808 0.89456 0.93787 0.93837 0.88488 0.89887 0.76352 0.74229 0.83780 0.82610 0.82699 0.84892 0.76806 1.17643 1.16968 0.84338 0.84583 0.90519 0.88720 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.41 10.72 -35.23 -0.38 -0.79 16 3 C 0.06 -0.04 4.31 -25.92 -0.11 -0.15 16 4 H 0.09 -0.16 7.87 -51.93 -0.41 -0.57 16 5 C -0.14 0.21 7.66 -25.92 -0.20 0.01 16 6 C 0.13 -0.05 4.24 -67.12 -0.28 -0.34 16 7 H 0.12 0.11 7.46 -51.93 -0.39 -0.28 16 8 N -0.72 0.36 5.30 -54.13 -0.29 0.07 16 9 C 0.56 1.29 7.75 -12.58 -0.10 1.19 16 10 O -0.52 -3.01 14.74 -16.71 -0.25 -3.25 16 11 C -0.17 -0.16 5.89 -104.79 -0.62 -0.78 16 12 C 0.18 0.30 6.71 -38.75 -0.26 0.04 16 13 O -0.47 -1.13 11.56 -40.70 -0.47 -1.60 16 14 C -0.14 -0.11 9.65 -39.06 -0.38 -0.49 16 15 C 0.03 0.01 5.87 -104.95 -0.62 -0.61 16 16 C 0.02 0.02 7.02 -36.54 -0.26 -0.24 16 17 C -0.18 -0.01 10.26 -39.38 -0.40 -0.41 16 18 C -0.17 -0.08 10.78 -39.82 -0.43 -0.51 16 19 C -0.05 -0.02 6.21 -35.52 -0.22 -0.24 16 20 C -0.03 0.02 2.98 36.01 0.11 0.13 16 21 O -0.53 0.33 12.88 -35.23 -0.45 -0.12 16 22 Si 0.70 -0.65 32.11 -169.99 -5.46 -6.10 16 23 O -0.16 -0.20 8.79 4.75 0.04 -0.16 16 24 C -0.12 0.17 9.48 -39.60 -0.38 -0.20 16 25 C -0.06 0.10 9.47 -39.61 -0.38 -0.27 16 26 C -0.17 0.09 7.71 -25.91 -0.20 -0.11 16 27 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 28 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 29 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.10 -0.17 8.12 -51.93 -0.42 -0.59 16 31 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.40 -1.23 6.73 -40.82 -0.27 -1.51 16 33 H 0.40 -0.59 9.06 45.56 0.41 -0.18 16 34 H 0.14 0.01 7.90 -52.49 -0.41 -0.41 16 35 H 0.16 -0.36 7.24 -52.49 -0.38 -0.74 16 36 H 0.16 -0.10 8.06 -52.48 -0.42 -0.53 16 37 H 0.13 -0.15 7.96 -51.93 -0.41 -0.56 16 38 H 0.38 -1.68 8.70 45.56 0.40 -1.28 16 39 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 40 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 41 H 0.14 -0.52 6.95 -52.49 -0.37 -0.88 16 42 H 0.14 -0.63 6.38 -52.49 -0.33 -0.96 16 43 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 44 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 LS Contribution 378.43 15.07 5.70 5.70 Total: 0.00 -9.93 378.43 -9.92 -19.84 By element: Atomic # 1 Polarization: -6.93 SS G_CDS: -4.75 Total: -11.68 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -3.62 Total: -1.91 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -0.29 Total: 0.07 kcal Atomic # 8 Polarization: -4.41 SS G_CDS: -1.51 Total: -5.92 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.46 Total: -6.10 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -9.93 -9.92 -19.84 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12807986.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.818 kcal (2) G-P(sol) polarization free energy of solvation -9.926 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.744 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.916 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.842 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.660 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds