Wall clock time and date at job start Mon Mar 8 2021 04:09:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42902 * 113.99819 * 2 1 4 4 H 1.09003 * 112.85265 * 341.19725 * 3 2 1 5 5 C 1.53783 * 113.69000 * 112.46423 * 3 2 1 6 6 C 1.53784 * 87.08198 * 139.99044 * 5 3 2 7 7 H 1.09004 * 113.61405 * 89.11598 * 6 5 3 8 8 N 1.46491 * 113.61668 * 220.01941 * 6 5 3 9 9 C 1.34782 * 120.00006 * 252.49679 * 8 6 5 10 10 O 1.21570 * 119.99722 * 0.02562 * 9 8 6 11 11 C 1.47662 * 119.99854 * 179.97438 * 9 8 6 12 12 C 1.40008 * 120.45763 * 353.91472 * 11 9 8 13 13 N 1.31306 * 121.37995 * 179.71126 * 12 11 9 14 14 C 1.32822 * 121.88785 * 0.56177 * 13 12 11 15 15 N 1.37157 * 132.96457 * 179.73359 * 14 13 12 16 16 C 1.36947 * 110.11268 * 179.97438 * 15 14 13 17 17 C 1.34176 * 109.95433 * 0.02562 * 16 15 14 18 18 C 1.50700 * 126.59858 * 179.97438 * 17 16 15 19 19 O 1.42904 * 109.46575 * 105.00287 * 18 17 16 20 20 Si 1.86305 * 109.47281 * 345.00863 * 18 17 16 21 21 C 1.41028 * 120.08616 * 359.73450 * 14 13 12 22 22 C 1.39284 * 119.61419 * 359.97438 * 21 14 13 23 23 C 1.50703 * 121.03260 * 179.97438 * 22 21 14 24 24 C 1.53782 * 113.61214 * 209.99911 * 3 2 1 25 25 H 1.09000 * 109.47058 * 180.02562 * 1 2 3 26 26 H 1.09001 * 109.47316 * 300.00333 * 1 2 3 27 27 H 1.09004 * 109.47160 * 60.00075 * 1 2 3 28 28 H 1.09000 * 113.61540 * 254.53640 * 5 3 2 29 29 H 1.08997 * 113.61702 * 25.44577 * 5 3 2 30 30 H 0.97002 * 120.00021 * 72.49631 * 8 6 5 31 31 H 1.08001 * 119.30455 * 0.02562 * 12 11 9 32 32 H 0.97002 * 124.93713 * 0.02562 * 15 14 13 33 33 H 1.08002 * 125.02166 * 179.97438 * 16 15 14 34 34 H 1.08995 * 109.47542 * 225.00388 * 18 17 16 35 35 H 0.96698 * 114.00489 * 300.00245 * 19 18 17 36 36 H 1.48495 * 109.99910 * 58.67433 * 20 18 17 37 37 H 1.48496 * 109.99807 * 179.97438 * 20 18 17 38 38 H 1.08996 * 109.47148 * 263.79192 * 23 22 21 39 39 H 1.09002 * 109.46533 * 23.78819 * 23 22 21 40 40 H 1.08996 * 109.47007 * 143.78533 * 23 22 21 41 41 H 1.09001 * 113.61761 * 334.48366 * 24 3 2 42 42 H 1.09001 * 113.61174 * 105.39098 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0790 -0.3238 5 6 2.7530 1.6511 1.3014 6 6 3.8220 2.3200 0.4211 7 1 3.6208 3.3708 0.2124 8 7 5.1928 2.0820 0.8795 9 6 5.8937 3.0792 1.4547 10 8 5.3881 4.1760 1.5935 11 6 7.2753 2.8391 1.9174 12 6 7.8224 1.5509 1.8802 13 7 9.0506 1.3179 2.2818 14 6 9.8304 2.2848 2.7520 15 7 11.1168 2.3001 3.2277 16 6 11.4671 3.5714 3.5974 17 6 10.4425 4.4101 3.3803 18 6 10.4209 5.8919 3.6539 19 8 10.5279 6.6055 2.4204 20 14 11.8535 6.3407 4.7572 21 6 9.3488 3.6082 2.8264 22 6 8.0527 3.8938 2.4037 23 6 7.5053 5.2963 2.4696 24 6 3.3755 1.3719 -0.7045 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3634 0.5139 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 2.2132 2.3504 1.9398 29 1 3.1169 0.7773 1.8418 30 1 5.5961 1.2067 0.7691 31 1 7.2233 0.7327 1.5087 32 1 11.6945 1.5236 3.2922 33 1 12.4260 3.8565 4.0043 34 1 9.4857 6.1568 4.1470 35 1 11.3379 6.4183 1.9266 36 1 13.1332 5.9554 4.1098 37 1 11.8437 7.7996 5.0339 38 1 6.9296 5.4189 3.3869 39 1 8.3301 6.0089 2.4603 40 1 6.8607 5.4755 1.6091 41 1 3.9095 0.4217 -0.7125 42 1 3.3381 1.8459 -1.6854 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_12890568.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:34 Heat of formation + Delta-G solvation = -3.846679 kcal Electronic energy + Delta-G solvation = -26415.544035 eV Core-core repulsion = 22557.198504 eV Total energy + Delta-G solvation = -3858.345530 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.141 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.83509 -41.24470 -39.99356 -38.65488 -37.87266 -37.23182 -35.00290 -34.21475 -31.93423 -30.92694 -28.78844 -27.82790 -26.78717 -26.56783 -25.37894 -24.32666 -23.59195 -21.73672 -21.07222 -20.66369 -19.31088 -18.68828 -18.16515 -17.70108 -17.44118 -16.87830 -16.69037 -16.54243 -16.19083 -16.11959 -15.83561 -15.49226 -15.38720 -15.08519 -14.82921 -14.65313 -14.04066 -13.98444 -13.67275 -13.53571 -13.49817 -13.36621 -13.15478 -13.01297 -12.74483 -12.43813 -12.16161 -12.11581 -11.87169 -11.83205 -11.08701 -11.04073 -10.53448 -10.47275 -10.20053 -10.01565 -9.57122 -9.13758 -5.00620 -0.21325 -0.03938 1.23288 1.38317 1.50377 1.61488 1.92126 1.94581 2.08181 2.86656 2.90027 3.28233 3.38151 3.44192 3.51628 3.53205 3.59599 3.75298 3.78677 3.82342 3.87021 4.10092 4.21703 4.28350 4.30537 4.44605 4.45800 4.56082 4.67617 4.69286 4.70424 4.76560 4.78345 4.90844 4.96283 4.97671 5.06216 5.08249 5.21496 5.42722 5.49926 5.61345 5.79739 6.10354 6.22237 6.44001 6.50858 6.87104 7.26826 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.063 3.937 4 H 0.093 0.907 5 C -0.168 4.168 6 C 0.127 3.873 7 H 0.121 0.879 8 N -0.716 5.716 9 C 0.573 3.427 10 O -0.529 6.529 11 C -0.234 4.234 12 C 0.181 3.819 13 N -0.504 5.504 14 C 0.308 3.692 15 N -0.570 5.570 16 C 0.067 3.933 17 C -0.176 4.176 18 C -0.044 4.044 19 O -0.527 6.527 20 Si 0.686 3.314 21 C -0.150 4.150 22 C 0.086 3.914 23 C -0.134 4.134 24 C -0.145 4.145 25 H 0.087 0.913 26 H 0.043 0.957 27 H 0.043 0.957 28 H 0.076 0.924 29 H 0.095 0.905 30 H 0.401 0.599 31 H 0.162 0.838 32 H 0.425 0.575 33 H 0.183 0.817 34 H 0.119 0.881 35 H 0.375 0.625 36 H -0.258 1.258 37 H -0.254 1.254 38 H 0.082 0.918 39 H 0.083 0.917 40 H 0.098 0.902 41 H 0.097 0.903 42 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.509 -2.287 1.380 3.068 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.110 0.890 5 C -0.207 4.207 6 C 0.021 3.979 7 H 0.139 0.861 8 N -0.367 5.367 9 C 0.362 3.638 10 O -0.407 6.407 11 C -0.242 4.242 12 C 0.012 3.988 13 N -0.217 5.217 14 C 0.075 3.925 15 N -0.175 5.175 16 C -0.060 4.060 17 C -0.184 4.184 18 C -0.154 4.154 19 O -0.333 6.333 20 Si 0.586 3.414 21 C -0.156 4.156 22 C 0.078 3.922 23 C -0.189 4.189 24 C -0.183 4.183 25 H 0.105 0.895 26 H 0.061 0.939 27 H 0.062 0.938 28 H 0.095 0.905 29 H 0.113 0.887 30 H 0.236 0.764 31 H 0.179 0.821 32 H 0.264 0.736 33 H 0.200 0.800 34 H 0.137 0.863 35 H 0.222 0.778 36 H -0.183 1.183 37 H -0.178 1.178 38 H 0.101 0.899 39 H 0.101 0.899 40 H 0.116 0.884 41 H 0.116 0.884 42 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 1.934 -1.849 1.771 3.208 hybrid contribution 0.174 -0.056 -1.163 1.177 sum 2.108 -1.905 0.607 2.905 Atomic orbital electron populations 1.22827 0.80774 1.03040 1.00136 1.87939 1.19985 1.26890 1.94564 1.23459 0.93752 0.85767 0.96547 0.88957 1.24025 0.97474 1.01466 0.97783 1.22200 0.80292 1.00571 0.94793 0.86140 1.45801 1.14801 1.14113 1.62027 1.17902 0.84761 0.84157 0.77018 1.90751 1.70510 1.23372 1.56054 1.20438 0.96388 0.95321 1.12013 1.22517 0.89246 0.94651 0.92343 1.66442 1.05506 1.34297 1.15462 1.18506 0.86676 0.90380 0.96958 1.41515 1.11057 1.10188 1.54760 1.21795 0.99912 0.82472 1.01774 1.20610 0.93191 0.95974 1.08616 1.24413 1.11857 0.87071 0.92106 1.86619 1.45316 1.67816 1.33559 0.95118 0.75667 0.83727 0.86843 1.19471 0.94991 0.93657 1.07524 1.19924 0.89695 0.96174 0.86411 1.21275 1.02130 0.90776 1.04756 1.23638 0.95696 1.00430 0.98519 0.89489 0.93852 0.93820 0.90527 0.88685 0.76367 0.82070 0.73599 0.79977 0.86332 0.77776 1.18278 1.17830 0.89933 0.89874 0.88380 0.88445 0.89931 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.53 10.72 -35.23 -0.38 -0.91 16 3 C 0.06 -0.02 4.31 -25.92 -0.11 -0.14 16 4 H 0.09 -0.14 7.87 -51.93 -0.41 -0.55 16 5 C -0.17 0.03 7.71 -25.92 -0.20 -0.17 16 6 C 0.13 -0.03 4.24 -67.12 -0.28 -0.31 16 7 H 0.12 0.10 7.47 -51.93 -0.39 -0.29 16 8 N -0.72 0.09 5.31 -54.02 -0.29 -0.19 16 9 C 0.57 1.53 7.72 -12.41 -0.10 1.43 16 10 O -0.53 -2.89 13.09 5.30 0.07 -2.82 16 11 C -0.23 -0.57 5.89 -104.82 -0.62 -1.18 16 12 C 0.18 0.22 10.67 -17.11 -0.18 0.03 16 13 N -0.50 -1.37 10.37 -11.95 -0.12 -1.49 16 14 C 0.31 0.71 8.42 -155.70 -1.31 -0.60 16 15 N -0.57 0.48 6.04 -12.11 -0.07 0.41 16 16 C 0.07 -0.12 10.44 -16.70 -0.17 -0.30 16 17 C -0.18 -0.02 5.57 -102.73 -0.57 -0.59 16 18 C -0.04 0.03 1.88 36.01 0.07 0.09 16 19 O -0.53 -0.42 11.67 -35.23 -0.41 -0.83 16 20 Si 0.69 -1.48 30.83 -169.99 -5.24 -6.72 16 21 C -0.15 -0.38 6.16 -105.13 -0.65 -1.03 16 22 C 0.09 0.28 5.98 -103.66 -0.62 -0.34 16 23 C -0.13 -0.40 8.46 36.01 0.30 -0.10 16 24 C -0.14 0.17 7.66 -25.91 -0.20 -0.03 16 25 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 26 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 29 H 0.09 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.40 -1.00 6.80 -40.82 -0.28 -1.28 16 31 H 0.16 -0.37 6.43 -52.49 -0.34 -0.70 16 32 H 0.43 -1.43 8.96 -40.82 -0.37 -1.79 16 33 H 0.18 -0.91 6.28 -52.49 -0.33 -1.24 16 34 H 0.12 -0.07 7.13 -51.93 -0.37 -0.44 16 35 H 0.37 -0.78 8.70 45.56 0.40 -0.38 16 36 H -0.26 0.28 7.00 56.52 0.40 0.68 16 37 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 38 H 0.08 0.23 8.14 -51.93 -0.42 -0.20 16 39 H 0.08 0.23 4.79 -51.93 -0.25 -0.02 16 40 H 0.10 0.44 5.95 -51.93 -0.31 0.13 16 41 H 0.10 -0.14 8.12 -51.93 -0.42 -0.56 16 42 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 LS Contribution 343.57 15.07 5.18 5.18 Total: 0.00 -9.05 343.57 -10.04 -19.08 By element: Atomic # 1 Polarization: -4.31 SS G_CDS: -5.22 Total: -9.53 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -3.55 Total: -2.16 kcal Atomic # 7 Polarization: -0.80 SS G_CDS: -0.48 Total: -1.28 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -0.72 Total: -4.57 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.24 Total: -6.72 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -9.05 -10.04 -19.08 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_12890568.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.237 kcal (2) G-P(sol) polarization free energy of solvation -9.049 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.189 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.036 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.084 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.847 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds