Wall clock time and date at job start Mon Mar 8 2021 04:09:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42904 * 114.00046 * 2 1 4 4 H 1.08995 * 112.84571 * 341.19758 * 3 2 1 5 5 C 1.53776 * 113.68813 * 112.46761 * 3 2 1 6 6 C 1.53785 * 87.08197 * 139.99282 * 5 3 2 7 7 H 1.08994 * 113.69349 * 89.12639 * 6 5 3 8 8 N 1.46505 * 113.61203 * 220.01850 * 6 5 3 9 9 C 1.34777 * 119.99761 * 252.49236 * 8 6 5 10 10 O 1.21281 * 119.99878 * 0.02562 * 9 8 6 11 11 C 1.50693 * 119.99696 * 180.02562 * 9 8 6 12 12 C 1.50705 * 109.47203 * 185.65441 * 11 9 8 13 13 C 1.39321 * 120.06165 * 83.97013 * 12 11 9 14 14 C 1.48387 * 120.11946 * 359.96241 * 13 12 11 15 15 C 1.39340 * 120.12070 * 236.10259 * 14 13 12 16 16 C 1.38017 * 119.87543 * 179.69678 * 15 14 13 17 17 C 1.38320 * 120.12224 * 0.60056 * 16 15 14 18 18 C 1.50700 * 119.87554 * 179.69497 * 17 16 15 19 19 O 1.42908 * 109.46836 * 119.97983 * 18 17 16 20 20 Si 1.86292 * 109.47382 * 359.97438 * 18 17 16 21 21 C 1.38317 * 120.24539 * 359.67303 * 17 16 15 22 22 C 1.38020 * 120.11825 * 0.02682 * 21 17 16 23 23 C 1.39353 * 119.75565 * 179.97438 * 13 12 11 24 24 C 1.37990 * 119.88229 * 359.97438 * 23 13 12 25 25 C 1.38344 * 120.11875 * 0.02562 * 24 23 13 26 26 C 1.38040 * 120.06004 * 263.95537 * 12 11 9 27 27 C 1.53781 * 113.61198 * 210.00209 * 3 2 1 28 28 H 1.09002 * 109.47159 * 300.00084 * 1 2 3 29 29 H 1.09001 * 109.47312 * 59.99624 * 1 2 3 30 30 H 1.08999 * 109.47394 * 180.02562 * 1 2 3 31 31 H 1.09006 * 113.61588 * 25.44019 * 5 3 2 32 32 H 1.08998 * 113.61596 * 254.54117 * 5 3 2 33 33 H 0.96999 * 119.99644 * 72.49679 * 8 6 5 34 34 H 1.09001 * 109.47263 * 65.65921 * 11 9 8 35 35 H 1.08996 * 109.47500 * 305.65555 * 11 9 8 36 36 H 1.08000 * 120.05762 * 359.97438 * 15 14 13 37 37 H 1.07998 * 119.93924 * 180.31546 * 16 15 14 38 38 H 1.09001 * 109.47239 * 239.97163 * 18 17 16 39 39 H 0.96702 * 113.99893 * 180.02562 * 19 18 17 40 40 H 1.48499 * 109.99819 * 298.67728 * 20 18 17 41 41 H 1.48498 * 110.00342 * 59.99702 * 20 18 17 42 42 H 1.08000 * 119.94375 * 179.97438 * 21 17 16 43 43 H 1.08006 * 120.06073 * 179.97438 * 22 21 17 44 44 H 1.08005 * 120.05467 * 179.72641 * 23 13 12 45 45 H 1.08006 * 119.94467 * 179.97438 * 24 23 13 46 46 H 1.08002 * 119.87533 * 180.02562 * 25 24 23 47 47 H 1.07999 * 119.94313 * 0.03825 * 26 12 11 48 48 H 1.08993 * 113.61561 * 105.39105 * 27 3 2 49 49 H 1.09005 * 113.69556 * 334.49376 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0788 -0.3237 5 6 2.7531 1.6510 1.3013 6 6 3.8220 2.3199 0.4210 7 1 3.6222 3.3707 0.2117 8 7 5.1929 2.0818 0.8795 9 6 5.8939 3.0790 1.4547 10 8 5.3895 4.1732 1.5931 11 6 7.3042 2.8342 1.9258 12 6 7.8109 4.0548 2.6500 13 6 7.5135 4.2399 3.9985 14 6 6.6967 3.2367 4.7254 15 6 5.5285 3.6261 5.3776 16 6 4.7693 2.6877 6.0468 17 6 5.1727 1.3651 6.0813 18 6 4.3431 0.3463 6.8195 19 8 3.9125 -0.6674 5.9089 20 14 2.8555 1.1814 7.5681 21 6 6.3344 0.9740 5.4405 22 6 7.0980 1.9029 4.7630 23 6 7.9858 5.3706 4.6620 24 6 8.7452 6.3002 3.9813 25 6 9.0374 6.1114 2.6423 26 6 8.5708 4.9914 1.9786 27 6 3.3755 1.3719 -0.7046 28 1 -0.3633 0.5139 0.8900 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3634 -1.0276 0.0005 31 1 3.1168 0.7770 1.8417 32 1 2.2133 2.3502 1.9398 33 1 5.5961 1.2065 0.7690 34 1 7.9437 2.6296 1.0672 35 1 7.3183 1.9789 2.6014 36 1 5.2155 4.6595 5.3556 37 1 3.8611 2.9875 6.5484 38 1 4.9419 -0.1061 7.6100 39 1 3.3719 -1.3581 6.3162 40 1 3.2898 2.2160 8.5408 41 1 2.0307 1.8022 6.5006 42 1 6.6449 -0.0600 5.4709 43 1 8.0051 1.5965 4.2633 44 1 7.7544 5.5211 5.7062 45 1 9.1114 7.1771 4.4945 46 1 9.6325 6.8412 2.1135 47 1 8.8016 4.8492 0.9332 48 1 3.3381 1.8458 -1.6854 49 1 3.9105 0.4222 -0.7135 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_13158394.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:45 Heat of formation + Delta-G solvation = -27.785198 kcal Electronic energy + Delta-G solvation = -31788.561394 eV Core-core repulsion = 27648.039734 eV Total energy + Delta-G solvation = -4140.521660 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -41.52217 -40.82744 -39.88425 -39.23716 -37.54524 -37.17987 -34.40068 -33.98720 -33.32125 -31.98656 -30.74611 -28.92467 -27.73079 -26.74743 -26.53584 -24.92579 -23.96004 -23.32589 -22.60900 -21.65685 -21.33665 -20.83050 -18.41817 -18.31230 -18.16429 -17.89615 -17.05684 -16.92292 -16.79350 -16.46913 -16.34920 -16.07286 -15.94283 -15.63586 -15.36480 -15.06057 -14.99613 -14.72561 -14.56089 -14.35475 -14.05607 -13.81385 -13.77695 -13.53506 -13.47355 -13.36935 -13.17565 -12.89885 -12.76326 -12.47651 -12.19209 -12.12875 -12.09974 -12.01860 -11.92106 -11.83999 -11.62473 -10.76689 -10.45788 -10.40761 -10.06585 -9.94224 -9.91807 -9.67548 -9.16104 -4.99039 -0.06017 0.40062 0.47311 0.66444 1.26999 1.62450 1.75101 1.97161 2.17583 2.62153 2.86793 2.99747 3.36899 3.45447 3.54994 3.57113 3.71488 3.82557 3.84423 3.84983 3.85693 3.92985 4.01187 4.06057 4.18263 4.28130 4.30716 4.33021 4.38150 4.46049 4.46977 4.47728 4.54791 4.62661 4.69971 4.70900 4.73736 4.77430 4.87419 4.93412 4.98258 5.00763 5.03248 5.10439 5.15105 5.36050 5.43700 5.49668 5.56176 5.57668 5.63723 5.70798 5.93831 6.08582 6.24462 6.56214 6.59169 7.33185 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.064 3.936 4 H 0.091 0.909 5 C -0.167 4.167 6 C 0.126 3.874 7 H 0.117 0.883 8 N -0.719 5.719 9 C 0.520 3.480 10 O -0.528 6.528 11 C -0.115 4.115 12 C -0.051 4.051 13 C -0.038 4.038 14 C -0.036 4.036 15 C -0.093 4.093 16 C -0.120 4.120 17 C -0.073 4.073 18 C -0.070 4.070 19 O -0.544 6.544 20 Si 0.679 3.321 21 C -0.086 4.086 22 C -0.113 4.113 23 C -0.104 4.104 24 C -0.117 4.117 25 C -0.114 4.114 26 C -0.105 4.105 27 C -0.143 4.143 28 H 0.042 0.958 29 H 0.043 0.957 30 H 0.087 0.913 31 H 0.096 0.904 32 H 0.072 0.928 33 H 0.402 0.598 34 H 0.105 0.895 35 H 0.109 0.891 36 H 0.127 0.873 37 H 0.118 0.882 38 H 0.075 0.925 39 H 0.382 0.618 40 H -0.255 1.255 41 H -0.251 1.251 42 H 0.130 0.870 43 H 0.130 0.870 44 H 0.124 0.876 45 H 0.125 0.875 46 H 0.125 0.875 47 H 0.123 0.877 48 H 0.081 0.919 49 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.269 -4.125 0.925 4.236 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.293 6.293 3 C 0.006 3.994 4 H 0.109 0.891 5 C -0.206 4.206 6 C 0.020 3.980 7 H 0.135 0.865 8 N -0.371 5.371 9 C 0.306 3.694 10 O -0.403 6.403 11 C -0.155 4.155 12 C -0.051 4.051 13 C -0.038 4.038 14 C -0.036 4.036 15 C -0.111 4.111 16 C -0.137 4.137 17 C -0.073 4.073 18 C -0.181 4.181 19 O -0.351 6.351 20 Si 0.581 3.419 21 C -0.104 4.104 22 C -0.131 4.131 23 C -0.122 4.122 24 C -0.135 4.135 25 C -0.132 4.132 26 C -0.123 4.123 27 C -0.181 4.181 28 H 0.061 0.939 29 H 0.061 0.939 30 H 0.105 0.895 31 H 0.114 0.886 32 H 0.091 0.909 33 H 0.237 0.763 34 H 0.124 0.876 35 H 0.127 0.873 36 H 0.145 0.855 37 H 0.135 0.865 38 H 0.093 0.907 39 H 0.230 0.770 40 H -0.180 1.180 41 H -0.175 1.175 42 H 0.148 0.852 43 H 0.147 0.853 44 H 0.142 0.858 45 H 0.143 0.857 46 H 0.143 0.857 47 H 0.141 0.859 48 H 0.099 0.901 49 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -0.623 -2.352 0.717 2.537 hybrid contribution 0.438 -0.105 -0.221 0.502 sum -0.185 -2.458 0.496 2.514 Atomic orbital electron populations 1.22822 0.80831 1.03026 1.00079 1.87940 1.19937 1.26848 1.94559 1.23450 0.93703 0.85726 0.96567 0.89100 1.23997 0.97459 1.01467 0.97651 1.22160 0.80762 1.00265 0.94768 0.86538 1.45886 1.14716 1.14298 1.62175 1.20486 0.87518 0.84360 0.76995 1.90728 1.70998 1.23988 1.54585 1.20902 0.94074 0.98570 1.01911 1.19193 0.97660 0.95706 0.92585 1.18529 0.97805 0.94669 0.92780 1.18772 0.94627 0.92918 0.97270 1.21098 0.93957 0.99643 0.96371 1.20792 0.99346 0.93165 1.00424 1.19371 0.95723 0.92856 0.99393 1.24661 1.04954 0.93307 0.95168 1.86489 1.73331 1.38166 1.37076 0.95471 0.81040 0.83885 0.81552 1.20898 0.93725 0.99628 0.96189 1.21247 0.99967 0.92073 0.99811 1.21159 0.97917 0.93281 0.99887 1.21111 0.98531 0.99076 0.94741 1.21194 0.99804 0.97454 0.94757 1.20928 0.97741 0.93988 0.99599 1.23614 0.95723 1.00411 0.98383 0.93912 0.93870 0.89450 0.88599 0.90940 0.76347 0.87641 0.87314 0.85525 0.86491 0.90721 0.77048 1.17992 1.17539 0.85224 0.85260 0.85848 0.85699 0.85750 0.85864 0.90061 0.88470 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.85 101.05 1.10 1.09 16 2 O -0.37 -0.86 10.72 -35.23 -0.38 -1.24 16 3 C 0.06 0.05 4.31 -25.92 -0.11 -0.06 16 4 H 0.09 -0.03 7.87 -51.93 -0.41 -0.44 16 5 C -0.17 -0.27 7.71 -25.92 -0.20 -0.47 16 6 C 0.13 0.14 4.24 -67.11 -0.28 -0.14 16 7 H 0.12 0.29 7.46 -51.93 -0.39 -0.10 16 8 N -0.72 -0.51 5.35 -53.01 -0.28 -0.79 16 9 C 0.52 1.55 7.80 -10.99 -0.09 1.47 16 10 O -0.53 -3.75 15.65 5.56 0.09 -3.66 16 11 C -0.12 -0.07 5.33 -29.04 -0.15 -0.22 16 12 C -0.05 -0.13 4.38 -104.29 -0.46 -0.59 16 13 C -0.04 -0.12 5.40 -104.90 -0.57 -0.69 16 14 C -0.04 -0.11 4.90 -104.90 -0.51 -0.62 16 15 C -0.09 -0.35 9.62 -39.25 -0.38 -0.72 16 16 C -0.12 -0.43 8.65 -39.63 -0.34 -0.77 16 17 C -0.07 -0.20 5.43 -104.56 -0.57 -0.77 16 18 C -0.07 -0.02 2.81 36.01 0.10 0.08 16 19 O -0.54 -0.14 12.74 -35.23 -0.45 -0.59 16 20 Si 0.68 -0.21 29.78 -169.99 -5.06 -5.28 16 21 C -0.09 -0.16 9.59 -39.63 -0.38 -0.54 16 22 C -0.11 -0.19 7.75 -39.25 -0.30 -0.49 16 23 C -0.10 -0.27 9.62 -39.26 -0.38 -0.65 16 24 C -0.12 -0.21 10.03 -39.63 -0.40 -0.61 16 25 C -0.11 -0.20 10.04 -39.52 -0.40 -0.59 16 26 C -0.10 -0.22 9.67 -39.63 -0.38 -0.60 16 27 C -0.14 0.03 7.66 -25.92 -0.20 -0.17 16 28 H 0.04 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.04 -0.04 8.14 -51.93 -0.42 -0.47 16 30 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.10 0.24 8.14 -51.93 -0.42 -0.18 16 32 H 0.07 0.18 8.14 -51.93 -0.42 -0.25 16 33 H 0.40 -0.72 8.73 -40.82 -0.36 -1.07 16 34 H 0.11 -0.20 8.05 -51.93 -0.42 -0.62 16 35 H 0.11 -0.06 4.69 -51.93 -0.24 -0.30 16 36 H 0.13 0.42 8.06 -52.49 -0.42 0.00 16 37 H 0.12 0.37 4.86 -52.49 -0.26 0.12 16 38 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 39 H 0.38 -1.77 8.74 45.56 0.40 -1.37 16 40 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 41 H -0.25 -0.79 7.11 56.52 0.40 -0.39 16 42 H 0.13 0.06 8.06 -52.49 -0.42 -0.36 16 43 H 0.13 -0.04 7.14 -52.48 -0.37 -0.41 16 44 H 0.12 0.17 8.06 -52.48 -0.42 -0.25 16 45 H 0.13 -0.02 8.06 -52.48 -0.42 -0.44 16 46 H 0.12 -0.03 8.06 -52.49 -0.42 -0.46 16 47 H 0.12 0.03 8.06 -52.49 -0.42 -0.39 16 48 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 49 H 0.10 -0.05 8.12 -51.93 -0.42 -0.47 16 LS Contribution 405.06 15.07 6.10 6.10 Total: 0.00 -9.47 405.06 -12.04 -21.51 By element: Atomic # 1 Polarization: -2.82 SS G_CDS: -7.15 Total: -9.97 kcal Atomic # 6 Polarization: -1.18 SS G_CDS: -4.90 Total: -6.08 kcal Atomic # 7 Polarization: -0.51 SS G_CDS: -0.28 Total: -0.79 kcal Atomic # 8 Polarization: -4.75 SS G_CDS: -0.74 Total: -5.49 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: -5.06 Total: -5.28 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -9.47 -12.04 -21.51 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13158394.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.276 kcal (2) G-P(sol) polarization free energy of solvation -9.473 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.749 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.036 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.509 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.785 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds