Wall clock time and date at job start Mon Mar 8 2021 04:09:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42895 * 113.99963 * 2 1 4 4 H 1.09001 * 112.85401 * 18.80370 * 3 2 1 5 5 C 1.53782 * 113.61635 * 149.99610 * 3 2 1 6 6 C 1.53780 * 87.08099 * 139.98068 * 5 3 2 7 7 H 1.09004 * 113.61645 * 89.20255 * 6 5 3 8 8 N 1.46504 * 113.61750 * 220.01705 * 6 5 3 9 9 C 1.34770 * 120.00320 * 203.47233 * 8 6 5 10 10 O 1.21587 * 120.00205 * 0.02562 * 9 8 6 11 11 C 1.47567 * 120.00137 * 180.02562 * 9 8 6 12 12 C 1.40209 * 120.12539 * 179.97438 * 11 9 8 13 13 O 1.35654 * 120.00032 * 0.04795 * 12 11 9 14 14 C 1.38813 * 119.99761 * 180.02562 * 12 11 9 15 15 C 1.37765 * 120.24669 * 0.02562 * 14 12 11 16 16 C 1.39848 * 120.24615 * 359.97438 * 15 14 12 17 17 C 1.47809 * 120.00334 * 179.97438 * 16 15 14 18 18 C 1.35933 * 125.93342 * 0.02562 * 17 16 15 19 19 C 1.40964 * 106.74515 * 179.97438 * 18 17 16 20 20 C 1.34705 * 107.03272 * 359.97438 * 19 18 17 21 21 C 1.50698 * 125.66963 * 180.02562 * 20 19 18 22 22 O 1.42906 * 109.46648 * 65.00063 * 21 20 19 23 23 Si 1.86298 * 109.47394 * 184.99975 * 21 20 19 24 24 O 1.34343 * 108.66655 * 359.73619 * 20 19 18 25 25 C 1.39179 * 119.99519 * 0.02562 * 16 15 14 26 26 C 1.53779 * 87.17750 * 334.61187 * 6 5 3 27 27 H 1.08998 * 109.46794 * 60.00211 * 1 2 3 28 28 H 1.08999 * 109.46642 * 179.97438 * 1 2 3 29 29 H 1.08993 * 109.47287 * 300.00458 * 1 2 3 30 30 H 1.09000 * 113.60996 * 25.43620 * 5 3 2 31 31 H 1.09002 * 113.61854 * 254.52797 * 5 3 2 32 32 H 0.97004 * 119.99106 * 23.47820 * 8 6 5 33 33 H 0.96704 * 114.00008 * 89.99342 * 13 12 11 34 34 H 1.08007 * 119.87666 * 180.02562 * 14 12 11 35 35 H 1.08003 * 119.88257 * 180.02562 * 15 14 12 36 36 H 1.08001 * 126.62643 * 359.97438 * 18 17 16 37 37 H 1.08006 * 126.48362 * 179.97438 * 19 18 17 38 38 H 1.09001 * 109.46989 * 305.00620 * 21 20 19 39 39 H 0.96700 * 113.99877 * 60.00280 * 22 21 20 40 40 H 1.48490 * 110.00007 * 180.02562 * 23 21 20 41 41 H 1.48500 * 109.99802 * 301.32140 * 23 21 20 42 42 H 1.08006 * 120.12223 * 180.27701 * 25 16 15 43 43 H 1.08993 * 113.61704 * 139.93322 * 26 6 5 44 44 H 1.09000 * 113.61163 * 270.84529 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3138 2.0789 0.3238 5 6 3.3755 1.3719 0.7046 6 6 3.8227 2.3181 -0.4222 7 1 3.6235 3.3695 -0.2143 8 7 5.1935 2.0787 -0.8802 9 6 5.8842 3.0657 -1.4844 10 8 5.3699 4.1550 -1.6490 11 6 7.2648 2.8243 -1.9463 12 6 7.9856 3.8491 -2.5757 13 8 7.4143 5.0655 -2.7602 14 6 9.2839 3.6189 -3.0096 15 6 9.8690 2.3854 -2.8249 16 6 9.1594 1.3560 -2.1984 17 6 9.7922 0.0344 -2.0035 18 6 11.0507 -0.3113 -2.3835 19 6 11.2348 -1.6561 -2.0031 20 6 10.0918 -2.0600 -1.4157 21 6 9.8319 -3.4324 -0.8501 22 8 10.7018 -3.6626 0.2601 23 14 8.0603 -3.5459 -0.2849 24 8 9.2244 -1.0341 -1.4120 25 6 7.8571 1.5756 -1.7593 26 6 2.7534 1.6511 -1.3033 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3632 -1.0277 -0.0005 29 1 -0.3633 0.5139 0.8899 30 1 3.9088 0.4213 0.7138 31 1 3.3384 1.8472 1.6848 32 1 5.6039 1.2096 -0.7486 33 1 7.5579 5.6824 -2.0294 34 1 9.8375 4.4099 -3.4939 35 1 10.8796 2.2129 -3.1645 36 1 11.7705 0.3221 -2.8807 37 1 12.1240 -2.2502 -2.1542 38 1 10.0170 -4.1831 -1.6184 39 1 10.5920 -3.0303 0.9835 40 1 7.7914 -4.8944 0.2756 41 1 7.7867 -2.5066 0.7400 42 1 7.3088 0.7833 -1.2712 43 1 2.2146 2.3513 -1.9416 44 1 3.1163 0.7770 -1.8439 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_13259648.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:48 Heat of formation + Delta-G solvation = -71.159144 kcal Electronic energy + Delta-G solvation = -29761.398833 eV Core-core repulsion = 25420.933332 eV Total energy + Delta-G solvation = -4340.465501 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.134 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -43.73208 -41.65093 -40.60968 -39.24634 -38.23853 -37.83966 -37.17902 -34.49505 -34.08763 -32.77146 -32.20893 -30.08594 -27.89029 -26.82485 -26.43951 -25.96232 -24.48484 -23.51058 -22.81861 -21.75939 -21.37777 -20.97087 -19.58226 -19.16963 -18.34930 -18.24942 -17.61561 -17.47115 -17.03249 -16.69918 -16.64016 -16.33019 -16.18982 -15.99411 -15.85705 -15.53981 -15.39262 -14.97282 -14.60252 -14.38667 -14.33811 -14.00422 -13.82357 -13.67277 -13.54488 -13.41380 -13.25416 -13.15361 -12.92126 -12.80352 -12.21919 -12.17987 -12.08904 -11.93116 -11.79871 -11.09471 -10.83642 -10.76920 -10.50869 -10.49003 -10.33356 -10.02174 -8.94008 -5.03874 -0.58747 -0.24785 0.74264 1.07890 1.42510 1.46314 1.66271 1.88153 1.91771 2.00340 2.60547 2.86294 3.06828 3.11511 3.24718 3.34847 3.47979 3.50488 3.56897 3.77351 3.81132 3.84412 3.94570 3.97410 4.13128 4.23531 4.28819 4.35737 4.41915 4.43552 4.56563 4.59980 4.64365 4.66960 4.73589 4.74159 4.79824 4.87285 4.93505 4.98151 5.00619 5.09427 5.13146 5.37804 5.41583 5.46769 5.94235 6.19575 6.20006 6.43473 6.64729 7.19129 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.145 4.145 6 C 0.126 3.874 7 H 0.120 0.880 8 N -0.716 5.716 9 C 0.562 3.438 10 O -0.517 6.517 11 C -0.164 4.164 12 C 0.180 3.820 13 O -0.475 6.475 14 C -0.149 4.149 15 C -0.052 4.052 16 C -0.034 4.034 17 C 0.035 3.965 18 C -0.188 4.188 19 C -0.169 4.169 20 C -0.049 4.049 21 C -0.034 4.034 22 O -0.521 6.521 23 Si 0.697 3.303 24 O -0.166 6.166 25 C -0.054 4.054 26 C -0.168 4.168 27 H 0.043 0.957 28 H 0.087 0.913 29 H 0.043 0.957 30 H 0.097 0.903 31 H 0.082 0.918 32 H 0.401 0.599 33 H 0.399 0.601 34 H 0.146 0.854 35 H 0.140 0.860 36 H 0.154 0.846 37 H 0.154 0.846 38 H 0.137 0.863 39 H 0.380 0.620 40 H -0.248 1.248 41 H -0.255 1.255 42 H 0.135 0.865 43 H 0.077 0.923 44 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.424 -0.862 0.615 1.141 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.293 6.293 3 C 0.006 3.994 4 H 0.111 0.889 5 C -0.183 4.183 6 C 0.021 3.979 7 H 0.138 0.862 8 N -0.368 5.368 9 C 0.349 3.651 10 O -0.393 6.393 11 C -0.168 4.168 12 C 0.133 3.867 13 O -0.287 6.287 14 C -0.167 4.167 15 C -0.071 4.071 16 C -0.034 4.034 17 C -0.014 4.014 18 C -0.207 4.207 19 C -0.188 4.188 20 C -0.099 4.099 21 C -0.144 4.144 22 O -0.327 6.327 23 Si 0.596 3.404 24 O -0.063 6.063 25 C -0.072 4.072 26 C -0.207 4.207 27 H 0.062 0.938 28 H 0.105 0.895 29 H 0.062 0.938 30 H 0.115 0.885 31 H 0.101 0.899 32 H 0.237 0.763 33 H 0.258 0.742 34 H 0.164 0.836 35 H 0.158 0.842 36 H 0.172 0.828 37 H 0.172 0.828 38 H 0.155 0.845 39 H 0.229 0.771 40 H -0.172 1.172 41 H -0.179 1.179 42 H 0.153 0.847 43 H 0.095 0.905 44 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -0.680 -1.093 0.415 1.352 hybrid contribution 1.206 0.334 1.118 1.678 sum 0.526 -0.759 1.533 1.789 Atomic orbital electron populations 1.22830 0.80733 1.03068 1.00150 1.87938 1.20015 1.26831 1.94552 1.23482 0.93690 0.85812 0.96464 0.88927 1.23629 0.95803 1.00395 0.98450 1.22213 0.80264 1.00536 0.94891 0.86233 1.45842 1.15014 1.15213 1.60757 1.18008 0.85040 0.84381 0.77662 1.90832 1.69885 1.23756 1.54784 1.20284 0.95764 0.95484 1.05278 1.18600 0.89609 0.86263 0.92202 1.84754 1.76385 1.21120 1.46422 1.21397 0.94161 0.98380 1.02761 1.21127 0.99946 0.91001 0.95004 1.17572 0.93840 0.89396 1.02612 1.20269 0.92758 0.86943 1.01469 1.21859 0.96336 0.96706 1.05810 1.21572 0.99182 0.95759 1.02315 1.22844 0.90216 0.90640 1.06215 1.24344 1.07644 0.90258 0.92123 1.86671 1.60748 1.56883 1.28424 0.94498 0.76986 0.81057 0.87824 1.83929 1.41335 1.18660 1.62409 1.21304 0.93831 0.95599 0.96497 1.24052 0.97400 1.01498 0.97774 0.93819 0.89454 0.93829 0.88480 0.89905 0.76334 0.74163 0.83628 0.84207 0.82792 0.82796 0.84504 0.77148 1.17235 1.17856 0.84678 0.90451 0.88631 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.49 10.72 -35.23 -0.38 -0.86 16 3 C 0.06 -0.03 4.31 -25.82 -0.11 -0.14 16 4 H 0.09 -0.15 7.87 -51.93 -0.41 -0.56 16 5 C -0.14 0.18 7.66 -25.92 -0.20 -0.02 16 6 C 0.13 -0.02 4.21 -67.12 -0.28 -0.30 16 7 H 0.12 0.10 7.50 -51.93 -0.39 -0.29 16 8 N -0.72 -0.03 5.31 -54.05 -0.29 -0.32 16 9 C 0.56 1.45 7.76 -12.46 -0.10 1.35 16 10 O -0.52 -3.00 14.76 -16.66 -0.25 -3.25 16 11 C -0.16 -0.21 5.88 -104.90 -0.62 -0.83 16 12 C 0.18 0.21 6.72 -38.63 -0.26 -0.05 16 13 O -0.48 -0.92 11.55 -40.62 -0.47 -1.39 16 14 C -0.15 0.12 9.96 -39.54 -0.39 -0.27 16 15 C -0.05 0.07 9.54 -39.15 -0.37 -0.31 16 16 C -0.03 0.00 5.87 -105.03 -0.62 -0.61 16 17 C 0.04 0.02 7.03 -36.50 -0.26 -0.24 16 18 C -0.19 0.01 10.26 -39.38 -0.40 -0.39 16 19 C -0.17 -0.05 10.78 -39.80 -0.43 -0.48 16 20 C -0.05 -0.01 6.20 -35.56 -0.22 -0.23 16 21 C -0.03 0.03 2.98 36.00 0.11 0.14 16 22 O -0.52 -0.09 12.88 -35.23 -0.45 -0.54 16 23 Si 0.70 -0.95 32.11 -169.99 -5.46 -6.40 16 24 O -0.17 -0.11 8.80 4.55 0.04 -0.07 16 25 C -0.05 0.01 9.20 -38.78 -0.36 -0.35 16 26 C -0.17 0.00 7.73 -25.82 -0.20 -0.19 16 27 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 29 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.10 -0.13 8.11 -51.93 -0.42 -0.55 16 31 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 32 H 0.40 -0.82 6.74 -40.82 -0.27 -1.10 16 33 H 0.40 -0.74 9.06 45.56 0.41 -0.33 16 34 H 0.15 -0.38 8.06 -52.48 -0.42 -0.80 16 35 H 0.14 -0.48 6.96 -52.48 -0.37 -0.85 16 36 H 0.15 -0.34 7.25 -52.49 -0.38 -0.72 16 37 H 0.15 -0.12 8.06 -52.48 -0.42 -0.54 16 38 H 0.14 -0.33 7.96 -51.93 -0.41 -0.74 16 39 H 0.38 -0.96 8.70 45.56 0.40 -0.57 16 40 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 41 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 42 H 0.14 -0.26 6.24 -52.48 -0.33 -0.58 16 43 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 44 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 LS Contribution 378.63 15.07 5.71 5.71 Total: 0.00 -9.36 378.63 -9.91 -19.26 By element: Atomic # 1 Polarization: -5.55 SS G_CDS: -4.75 Total: -10.30 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: -3.61 Total: -1.84 kcal Atomic # 7 Polarization: -0.03 SS G_CDS: -0.29 Total: -0.32 kcal Atomic # 8 Polarization: -4.60 SS G_CDS: -1.51 Total: -6.11 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.46 Total: -6.40 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -9.36 -9.91 -19.26 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13259648.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.894 kcal (2) G-P(sol) polarization free energy of solvation -9.356 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.250 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.909 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.265 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.159 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds