Wall clock time and date at job start Mon Mar 8 2021 04:09:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42900 * 114.00103 * 2 1 4 4 H 1.09004 * 112.85011 * 341.20318 * 3 2 1 5 5 C 1.53954 * 113.74232 * 112.39992 * 3 2 1 6 6 C 1.53779 * 87.02133 * 139.94633 * 5 3 2 7 7 H 1.08995 * 113.61473 * 89.22989 * 6 5 3 8 8 N 1.46502 * 113.61599 * 220.05199 * 6 5 3 9 9 C 1.34774 * 119.99866 * 254.13500 * 8 6 5 10 10 O 1.21513 * 120.00240 * 0.02562 * 9 8 6 11 11 C 1.48172 * 119.99607 * 179.97438 * 9 8 6 12 12 N 1.32713 * 119.72311 * 359.97438 * 11 9 8 13 13 C 1.31524 * 121.63747 * 179.97438 * 12 11 9 14 14 C 1.38556 * 120.90672 * 0.04247 * 13 12 11 15 15 C 1.50699 * 120.32429 * 180.02562 * 14 13 12 16 16 O 1.42906 * 109.46992 * 244.97193 * 15 14 13 17 17 Si 1.86295 * 109.47312 * 4.97442 * 15 14 13 18 18 C 1.38623 * 119.35381 * 359.97438 * 14 13 12 19 19 C 1.38595 * 118.48634 * 0.02562 * 18 14 13 20 20 C 1.53780 * 113.61671 * 210.00037 * 3 2 1 21 21 H 1.09004 * 109.47163 * 299.99737 * 1 2 3 22 22 H 1.09002 * 109.47093 * 59.99474 * 1 2 3 23 23 H 1.09001 * 109.47476 * 179.97438 * 1 2 3 24 24 H 1.09010 * 113.61209 * 25.42615 * 5 3 2 25 25 H 1.09004 * 113.67109 * 254.47738 * 5 3 2 26 26 H 0.97004 * 119.99968 * 74.13696 * 8 6 5 27 27 H 1.08001 * 119.54611 * 180.02562 * 13 12 11 28 28 H 1.09006 * 109.47211 * 124.97568 * 15 14 13 29 29 H 0.96699 * 113.99579 * 59.99952 * 16 15 14 30 30 H 1.48501 * 110.00298 * 58.68304 * 17 15 14 31 31 H 1.48505 * 110.00369 * 180.02562 * 17 15 14 32 32 H 1.07998 * 120.76158 * 180.02562 * 18 14 13 33 33 H 1.08000 * 120.46738 * 179.72634 * 19 18 14 34 34 H 1.08998 * 113.61336 * 105.39059 * 20 3 2 35 35 H 1.08998 * 113.68718 * 334.49666 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0789 -0.3237 5 6 2.7530 1.6533 1.3029 6 6 3.8220 2.3199 0.4211 7 1 3.6222 3.3708 0.2119 8 7 5.1929 2.0818 0.8796 9 6 5.8829 3.0701 1.4827 10 8 5.3679 4.1584 1.6465 11 6 7.2693 2.8291 1.9469 12 7 7.8259 1.6379 1.7665 13 6 9.0537 1.3829 2.1632 14 6 9.8158 2.3559 2.7893 15 6 11.2215 2.0496 3.2379 16 8 11.2925 2.1198 4.6635 17 14 11.6935 0.3372 2.6762 18 6 9.2731 3.6143 2.9980 19 6 7.9771 3.8546 2.5697 20 6 3.3756 1.3719 -0.7045 21 1 -0.3634 0.5138 0.8900 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3634 -1.0277 -0.0005 24 1 3.1164 0.7800 1.8448 25 1 2.2137 2.3540 1.9404 26 1 5.6040 1.2129 0.7492 27 1 9.4734 0.4014 1.9988 28 1 11.9080 2.7765 2.8038 29 1 10.7063 1.4989 5.1175 30 1 11.5930 0.2419 1.1977 31 1 13.0775 0.0227 3.1130 32 1 9.8471 4.3898 3.4834 33 1 7.5212 4.8220 2.7200 34 1 3.3381 1.8459 -1.6853 35 1 3.9104 0.4222 -0.7134 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_13287726.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:55 Heat of formation + Delta-G solvation = -40.782618 kcal Electronic energy + Delta-G solvation = -19394.671884 eV Core-core repulsion = 16167.678121 eV Total energy + Delta-G solvation = -3226.993763 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 265.115 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -41.91268 -40.89159 -39.58975 -37.97899 -37.24622 -34.50092 -33.46877 -32.94290 -28.26725 -27.63329 -26.79635 -25.30166 -24.97004 -23.50031 -21.76636 -21.15077 -19.12049 -18.70753 -18.24742 -17.56988 -16.83259 -16.76519 -16.55535 -16.28132 -16.08603 -15.92662 -15.77547 -15.10281 -14.87550 -14.50437 -14.39172 -14.23961 -13.62661 -13.51986 -13.43701 -12.80414 -12.66146 -12.23334 -12.17997 -12.17077 -11.88812 -11.30875 -11.09326 -10.69820 -10.64716 -10.49364 -10.33914 -10.01446 -5.18882 -0.59268 0.03369 1.08615 1.48420 1.61719 1.84232 1.96585 2.67671 2.81120 2.99033 3.24248 3.39574 3.41532 3.50874 3.63185 3.71731 3.77959 3.83165 3.90077 4.11185 4.25558 4.28090 4.42760 4.44591 4.50714 4.65905 4.70062 4.75736 4.80488 4.89269 4.93578 4.94746 5.04546 5.32860 5.47319 6.21164 6.32042 6.36875 6.61953 7.12966 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.168 4.168 6 C 0.122 3.878 7 H 0.120 0.880 8 N -0.697 5.697 9 C 0.574 3.426 10 O -0.529 6.529 11 C 0.081 3.919 12 N -0.453 5.453 13 C 0.105 3.895 14 C -0.150 4.150 15 C -0.067 4.067 16 O -0.536 6.536 17 Si 0.686 3.314 18 C -0.053 4.053 19 C -0.108 4.108 20 C -0.143 4.143 21 H 0.043 0.957 22 H 0.043 0.957 23 H 0.087 0.913 24 H 0.096 0.904 25 H 0.077 0.923 26 H 0.414 0.586 27 H 0.165 0.835 28 H 0.120 0.880 29 H 0.381 0.619 30 H -0.252 1.252 31 H -0.249 1.249 32 H 0.148 0.852 33 H 0.153 0.847 34 H 0.083 0.917 35 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.707 -2.765 0.189 2.860 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.293 6.293 3 C 0.006 3.994 4 H 0.111 0.889 5 C -0.207 4.207 6 C 0.017 3.983 7 H 0.138 0.862 8 N -0.348 5.348 9 C 0.359 3.641 10 O -0.405 6.405 11 C -0.058 4.058 12 N -0.163 5.163 13 C -0.055 4.055 14 C -0.153 4.153 15 C -0.178 4.178 16 O -0.341 6.341 17 Si 0.587 3.413 18 C -0.079 4.079 19 C -0.128 4.128 20 C -0.181 4.181 21 H 0.062 0.938 22 H 0.062 0.938 23 H 0.105 0.895 24 H 0.114 0.886 25 H 0.095 0.905 26 H 0.251 0.749 27 H 0.181 0.819 28 H 0.138 0.862 29 H 0.229 0.771 30 H -0.177 1.177 31 H -0.173 1.173 32 H 0.165 0.835 33 H 0.170 0.830 34 H 0.101 0.899 35 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -0.519 -2.811 -0.750 2.955 hybrid contribution 0.471 1.084 0.258 1.210 sum -0.048 -1.726 -0.492 1.796 Atomic orbital electron populations 1.22832 0.80758 1.03066 1.00136 1.87944 1.19991 1.26826 1.94542 1.23480 0.93731 0.85807 0.96429 0.88917 1.24050 0.97321 1.01494 0.97801 1.22286 0.80293 1.00606 0.95158 0.86232 1.45743 1.14499 1.15598 1.58975 1.17885 0.84206 0.84247 0.77771 1.90812 1.69424 1.24189 1.56062 1.21165 0.95073 0.90491 0.99028 1.67509 1.11985 1.20502 1.16353 1.22596 0.89491 0.98739 0.94656 1.21657 0.98396 0.95450 0.99766 1.25052 0.94242 1.12839 0.85686 1.86543 1.67141 1.64813 1.15617 0.94807 0.84768 0.79693 0.82055 1.21565 0.94381 0.96523 0.95411 1.22232 0.94303 1.00734 0.95563 1.23615 0.95664 1.00461 0.98361 0.93842 0.93818 0.89459 0.88585 0.90463 0.74936 0.81888 0.86248 0.77123 1.17691 1.17330 0.83474 0.82954 0.89866 0.88284 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.37 -0.55 10.72 -35.23 -0.38 -0.93 16 3 C 0.06 -0.02 4.31 -25.83 -0.11 -0.13 16 4 H 0.09 -0.15 7.87 -51.93 -0.41 -0.56 16 5 C -0.17 -0.01 7.73 -25.83 -0.20 -0.21 16 6 C 0.12 0.02 4.21 -67.11 -0.28 -0.27 16 7 H 0.12 0.11 7.50 -51.93 -0.39 -0.28 16 8 N -0.70 -0.55 5.35 -53.85 -0.29 -0.84 16 9 C 0.57 1.69 7.81 -12.18 -0.10 1.60 16 10 O -0.53 -3.04 15.94 5.35 0.09 -2.95 16 11 C 0.08 0.15 6.75 -83.01 -0.56 -0.41 16 12 N -0.45 -0.39 9.54 -9.80 -0.09 -0.49 16 13 C 0.10 -0.10 9.84 -17.57 -0.17 -0.27 16 14 C -0.15 0.17 5.36 -104.36 -0.56 -0.39 16 15 C -0.07 0.13 2.82 36.01 0.10 0.23 16 16 O -0.54 0.73 12.84 -35.23 -0.45 0.27 16 17 Si 0.69 -1.80 29.83 -169.99 -5.07 -6.87 16 18 C -0.05 0.03 9.83 -39.31 -0.39 -0.36 16 19 C -0.11 -0.09 9.63 -39.05 -0.38 -0.47 16 20 C -0.14 0.13 7.66 -25.92 -0.20 -0.07 16 21 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 22 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 23 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 24 H 0.10 0.06 8.14 -51.92 -0.42 -0.37 16 25 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 26 H 0.41 -0.19 8.04 -40.82 -0.33 -0.52 16 27 H 0.16 -0.56 4.92 -52.49 -0.26 -0.82 16 28 H 0.12 -0.21 7.96 -51.93 -0.41 -0.62 16 29 H 0.38 -1.95 8.70 45.56 0.40 -1.56 16 30 H -0.25 0.07 7.11 56.52 0.40 0.47 16 31 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 32 H 0.15 -0.28 8.06 -52.49 -0.42 -0.70 16 33 H 0.15 0.08 7.64 -52.49 -0.40 -0.32 16 34 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 35 H 0.10 -0.09 8.11 -51.93 -0.42 -0.51 16 LS Contribution 302.90 15.07 4.56 4.56 Total: 0.00 -7.24 302.90 -7.76 -14.99 By element: Atomic # 1 Polarization: -3.71 SS G_CDS: -4.38 Total: -8.09 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: -1.75 Total: 0.34 kcal Atomic # 7 Polarization: -0.95 SS G_CDS: -0.38 Total: -1.33 kcal Atomic # 8 Polarization: -2.87 SS G_CDS: -0.74 Total: -3.61 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: -5.07 Total: -6.87 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -7.24 -7.76 -14.99 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13287726.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.788 kcal (2) G-P(sol) polarization free energy of solvation -7.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.024 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.995 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.783 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds