Wall clock time and date at job start Mon Mar 8 2021 04:09:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42900 * 114.00103 * 2 1 4 4 H 1.09004 * 112.85011 * 341.20318 * 3 2 1 5 5 C 1.53954 * 113.74232 * 112.39992 * 3 2 1 6 6 C 1.53779 * 87.02133 * 139.94633 * 5 3 2 7 7 H 1.08995 * 113.61473 * 89.22989 * 6 5 3 8 8 N 1.46502 * 113.61599 * 220.05199 * 6 5 3 9 9 C 1.34774 * 119.99866 * 254.13500 * 8 6 5 10 10 O 1.21513 * 120.00240 * 0.02562 * 9 8 6 11 11 C 1.48172 * 119.99607 * 179.97438 * 9 8 6 12 12 N 1.32713 * 119.72311 * 359.97438 * 11 9 8 13 13 C 1.31524 * 121.63747 * 179.97438 * 12 11 9 14 14 C 1.38556 * 120.90672 * 0.04247 * 13 12 11 15 15 C 1.50699 * 120.32429 * 180.02562 * 14 13 12 16 16 O 1.42906 * 109.46992 * 244.97193 * 15 14 13 17 17 Si 1.86295 * 109.47312 * 4.97442 * 15 14 13 18 18 C 1.38623 * 119.35381 * 359.97438 * 14 13 12 19 19 C 1.38595 * 118.48634 * 0.02562 * 18 14 13 20 20 C 1.53780 * 113.61671 * 210.00037 * 3 2 1 21 21 H 1.09004 * 109.47163 * 299.99737 * 1 2 3 22 22 H 1.09002 * 109.47093 * 59.99474 * 1 2 3 23 23 H 1.09001 * 109.47476 * 179.97438 * 1 2 3 24 24 H 1.09010 * 113.61209 * 25.42615 * 5 3 2 25 25 H 1.09004 * 113.67109 * 254.47738 * 5 3 2 26 26 H 0.97004 * 119.99968 * 74.13696 * 8 6 5 27 27 H 1.08001 * 119.54611 * 180.02562 * 13 12 11 28 28 H 1.09006 * 109.47211 * 124.97568 * 15 14 13 29 29 H 0.96699 * 113.99579 * 59.99952 * 16 15 14 30 30 H 1.48501 * 110.00298 * 58.68304 * 17 15 14 31 31 H 1.48505 * 110.00369 * 180.02562 * 17 15 14 32 32 H 1.07998 * 120.76158 * 180.02562 * 18 14 13 33 33 H 1.08000 * 120.46738 * 179.72634 * 19 18 14 34 34 H 1.08998 * 113.61336 * 105.39059 * 20 3 2 35 35 H 1.08998 * 113.68718 * 334.49666 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0789 -0.3237 5 6 2.7530 1.6533 1.3029 6 6 3.8220 2.3199 0.4211 7 1 3.6222 3.3708 0.2119 8 7 5.1929 2.0818 0.8796 9 6 5.8829 3.0701 1.4827 10 8 5.3679 4.1584 1.6465 11 6 7.2693 2.8291 1.9469 12 7 7.8259 1.6379 1.7665 13 6 9.0537 1.3829 2.1632 14 6 9.8158 2.3559 2.7893 15 6 11.2215 2.0496 3.2379 16 8 11.2925 2.1198 4.6635 17 14 11.6935 0.3372 2.6762 18 6 9.2731 3.6143 2.9980 19 6 7.9771 3.8546 2.5697 20 6 3.3756 1.3719 -0.7045 21 1 -0.3634 0.5138 0.8900 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3634 -1.0277 -0.0005 24 1 3.1164 0.7800 1.8448 25 1 2.2137 2.3540 1.9404 26 1 5.6040 1.2129 0.7492 27 1 9.4734 0.4014 1.9988 28 1 11.9080 2.7765 2.8038 29 1 10.7063 1.4989 5.1175 30 1 11.5930 0.2419 1.1977 31 1 13.0775 0.0227 3.1130 32 1 9.8471 4.3898 3.4834 33 1 7.5212 4.8220 2.7200 34 1 3.3381 1.8459 -1.6853 35 1 3.9104 0.4222 -0.7134 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_13287726.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:54 Heat of formation + Delta-G solvation = -42.129310 kcal Electronic energy + Delta-G solvation = -19394.730281 eV Core-core repulsion = 16167.678121 eV Total energy + Delta-G solvation = -3227.052160 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 265.115 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -41.95624 -40.91404 -39.68919 -37.87469 -37.29693 -34.57402 -33.48733 -32.93009 -28.24289 -27.57578 -26.77790 -25.28800 -24.94969 -23.47889 -21.86533 -21.16093 -19.17227 -18.66689 -18.24084 -17.52970 -16.80329 -16.73595 -16.61551 -16.32385 -16.03776 -15.91878 -15.78303 -15.15124 -14.86940 -14.52819 -14.34715 -14.23435 -13.57650 -13.51719 -13.44200 -12.77532 -12.55131 -12.24508 -12.17727 -12.15636 -11.87707 -11.45066 -11.07535 -10.69977 -10.57492 -10.48422 -10.36376 -10.08514 -5.00434 -0.62283 0.06268 1.24829 1.49253 1.64380 1.89315 1.97874 2.63761 2.82938 3.01676 3.40568 3.42806 3.51337 3.52355 3.66854 3.77417 3.78862 3.87013 3.93382 4.11398 4.29146 4.40357 4.51305 4.55707 4.56893 4.69316 4.71383 4.84310 4.85777 4.93012 4.94100 4.97550 5.01929 5.35532 5.41367 6.23204 6.27502 6.58795 6.71339 6.99701 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.396 6.396 3 C 0.064 3.936 4 H 0.106 0.894 5 C -0.166 4.166 6 C 0.118 3.882 7 H 0.111 0.889 8 N -0.688 5.688 9 C 0.570 3.430 10 O -0.566 6.566 11 C 0.063 3.937 12 N -0.460 5.460 13 C 0.103 3.897 14 C -0.142 4.142 15 C -0.069 4.069 16 O -0.550 6.550 17 Si 0.773 3.227 18 C -0.054 4.054 19 C -0.115 4.115 20 C -0.134 4.134 21 H 0.047 0.953 22 H 0.053 0.947 23 H 0.092 0.908 24 H 0.090 0.910 25 H 0.074 0.926 26 H 0.420 0.580 27 H 0.189 0.811 28 H 0.119 0.881 29 H 0.397 0.603 30 H -0.280 1.280 31 H -0.296 1.296 32 H 0.161 0.839 33 H 0.149 0.851 34 H 0.093 0.907 35 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.461 -3.445 0.135 3.478 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.315 6.315 3 C 0.005 3.995 4 H 0.124 0.876 5 C -0.205 4.205 6 C 0.013 3.987 7 H 0.129 0.871 8 N -0.338 5.338 9 C 0.356 3.644 10 O -0.445 6.445 11 C -0.075 4.075 12 N -0.171 5.171 13 C -0.057 4.057 14 C -0.145 4.145 15 C -0.179 4.179 16 O -0.358 6.358 17 Si 0.678 3.322 18 C -0.079 4.079 19 C -0.136 4.136 20 C -0.172 4.172 21 H 0.066 0.934 22 H 0.071 0.929 23 H 0.111 0.889 24 H 0.108 0.892 25 H 0.092 0.908 26 H 0.258 0.742 27 H 0.205 0.795 28 H 0.136 0.864 29 H 0.248 0.752 30 H -0.206 1.206 31 H -0.223 1.223 32 H 0.178 0.822 33 H 0.167 0.833 34 H 0.112 0.888 35 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -0.309 -3.512 -0.797 3.614 hybrid contribution 0.462 1.263 0.300 1.378 sum 0.153 -2.248 -0.497 2.308 Atomic orbital electron populations 1.22966 0.79783 1.03726 1.00826 1.87908 1.21223 1.27728 1.94640 1.23573 0.94171 0.85684 0.96059 0.87585 1.24010 0.97352 1.01099 0.98025 1.22313 0.79978 1.00476 0.95901 0.87065 1.45738 1.14604 1.15452 1.57999 1.18136 0.84763 0.84011 0.77519 1.90781 1.70356 1.25557 1.57789 1.21074 0.94810 0.91314 1.00255 1.67501 1.12797 1.20047 1.16749 1.23019 0.88909 0.99811 0.93958 1.21775 0.98647 0.95090 0.98970 1.25162 0.93553 1.13489 0.85717 1.86514 1.67844 1.65748 1.15744 0.93791 0.81744 0.77643 0.79014 1.21745 0.93854 0.97233 0.95101 1.22283 0.94942 1.00523 0.95856 1.23564 0.95139 1.00135 0.98362 0.93406 0.92869 0.88905 0.89188 0.90751 0.74177 0.79486 0.86352 0.75220 1.20626 1.22335 0.82168 0.83310 0.88821 0.88166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.40 -1.16 10.72 -148.98 -1.60 -2.76 16 3 C 0.06 -0.03 4.31 31.18 0.13 0.10 16 4 H 0.11 -0.37 7.87 -2.38 -0.02 -0.39 16 5 C -0.17 -0.14 7.73 31.18 0.24 0.11 16 6 C 0.12 0.13 4.21 45.52 0.19 0.32 16 7 H 0.11 0.34 7.50 -2.39 -0.02 0.32 16 8 N -0.69 -1.72 5.35 -442.59 -2.37 -4.09 16 9 C 0.57 4.16 7.81 86.88 0.68 4.84 16 10 O -0.57 -7.61 15.94 -3.76 -0.06 -7.67 16 11 C 0.06 0.28 6.75 41.91 0.28 0.57 16 12 N -0.46 -0.79 9.54 -184.91 -1.76 -2.55 16 13 C 0.10 -0.27 9.84 84.81 0.83 0.56 16 14 C -0.14 0.43 5.36 -19.70 -0.11 0.33 16 15 C -0.07 0.33 2.82 71.24 0.20 0.53 16 16 O -0.55 2.10 12.84 -148.98 -1.91 0.19 16 17 Si 0.77 -4.66 29.83 68.60 2.05 -2.61 16 18 C -0.05 0.07 9.83 22.45 0.22 0.29 16 19 C -0.12 -0.29 9.63 22.61 0.22 -0.07 16 20 C -0.13 0.25 7.66 31.12 0.24 0.49 16 21 H 0.05 -0.14 8.14 -2.38 -0.02 -0.16 16 22 H 0.05 -0.21 8.14 -2.39 -0.02 -0.23 16 23 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 24 H 0.09 0.18 8.14 -2.38 -0.02 0.16 16 25 H 0.07 0.09 8.14 -2.38 -0.02 0.07 16 26 H 0.42 -0.16 8.04 -92.71 -0.75 -0.91 16 27 H 0.19 -1.58 4.92 -2.91 -0.01 -1.60 16 28 H 0.12 -0.52 7.96 -2.38 -0.02 -0.54 16 29 H 0.40 -4.63 8.70 -74.06 -0.64 -5.27 16 30 H -0.28 0.37 7.11 99.48 0.71 1.08 16 31 H -0.30 -0.59 7.11 99.48 0.71 0.12 16 32 H 0.16 -0.69 8.06 -2.91 -0.02 -0.71 16 33 H 0.15 0.39 7.64 -2.91 -0.02 0.37 16 34 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 35 H 0.10 -0.19 8.11 -2.39 -0.02 -0.21 16 Total: 0.00 -17.32 302.90 -1.52 -18.84 By element: Atomic # 1 Polarization: -8.36 SS G_CDS: -0.23 Total: -8.59 kcal Atomic # 6 Polarization: 4.88 SS G_CDS: 4.36 Total: 9.25 kcal Atomic # 7 Polarization: -2.51 SS G_CDS: -4.13 Total: -6.65 kcal Atomic # 8 Polarization: -6.67 SS G_CDS: -3.57 Total: -10.24 kcal Atomic # 14 Polarization: -4.66 SS G_CDS: 2.05 Total: -2.61 kcal Total: -17.32 -1.52 -18.84 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13287726.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.289 kcal (2) G-P(sol) polarization free energy of solvation -17.321 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.610 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.519 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.840 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.129 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds