Wall clock time and date at job start Mon Mar 8 2021 04:09:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42900 * 113.99945 * 2 1 4 4 H 1.09006 * 112.90452 * 341.24353 * 3 2 1 5 5 C 1.53773 * 113.61730 * 112.50188 * 3 2 1 6 6 C 1.53784 * 87.08380 * 139.98294 * 5 3 2 7 7 H 1.08999 * 113.69227 * 89.12673 * 6 5 3 8 8 N 1.46495 * 113.61345 * 220.02147 * 6 5 3 9 9 C 1.34781 * 119.99982 * 252.49478 * 8 6 5 10 10 O 1.21624 * 119.99768 * 359.97438 * 9 8 6 11 11 C 1.47267 * 120.00198 * 180.02562 * 9 8 6 12 12 C 1.36768 * 126.94079 * 359.67912 * 11 9 8 13 13 N 1.34652 * 108.39821 * 180.26313 * 12 11 9 14 14 C 1.46501 * 124.85658 * 180.02562 * 13 12 11 15 15 C 1.36448 * 110.29557 * 0.02562 * 13 12 11 16 16 C 1.50707 * 125.57195 * 179.97438 * 15 13 12 17 17 O 1.42898 * 109.46699 * 29.99864 * 16 15 13 18 18 Si 1.86301 * 109.47136 * 149.99945 * 16 15 13 19 19 C 1.34480 * 108.86015 * 359.97438 * 15 13 12 20 20 C 1.53780 * 113.61171 * 209.99915 * 3 2 1 21 21 H 1.09004 * 109.46615 * 180.02562 * 1 2 3 22 22 H 1.09001 * 109.47040 * 299.99941 * 1 2 3 23 23 H 1.08997 * 109.46803 * 60.00331 * 1 2 3 24 24 H 1.08999 * 113.61961 * 25.43333 * 5 3 2 25 25 H 1.09006 * 113.61323 * 254.52587 * 5 3 2 26 26 H 0.97004 * 120.00288 * 72.49268 * 8 6 5 27 27 H 1.08008 * 125.80254 * 0.24362 * 12 11 9 28 28 H 1.09005 * 109.46968 * 270.00656 * 14 13 12 29 29 H 1.09002 * 109.46840 * 29.99982 * 14 13 12 30 30 H 1.08999 * 109.47361 * 150.00056 * 14 13 12 31 31 H 1.08996 * 109.46985 * 269.99901 * 16 15 13 32 32 H 0.96698 * 114.00473 * 60.00628 * 17 16 15 33 33 H 1.48496 * 109.99907 * 58.67929 * 18 16 15 34 34 H 1.48502 * 109.99960 * 180.02562 * 18 16 15 35 35 H 1.07996 * 126.83831 * 179.97438 * 19 15 13 36 36 H 1.09007 * 113.61448 * 105.47214 * 20 3 2 37 37 H 1.08990 * 113.61624 * 334.56319 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3142 2.0797 -0.3229 5 6 2.7534 1.6489 1.3017 6 6 3.8227 2.3183 0.4221 7 1 3.6235 3.3695 0.2142 8 7 5.1934 2.0788 0.8803 9 6 5.8950 3.0748 1.4567 10 8 5.3902 4.1725 1.5961 11 6 7.2731 2.8342 1.9168 12 6 7.9738 1.6624 1.8363 13 7 9.1932 1.8587 2.3725 14 6 10.2386 0.8371 2.4717 15 6 9.3163 3.1451 2.8103 16 6 10.5379 3.7347 3.4670 17 8 11.7073 3.0778 2.9742 18 14 10.6361 5.5537 3.0765 19 6 8.1693 3.8011 2.5600 20 6 3.3755 1.3718 -0.7045 21 1 -0.3633 -1.0277 0.0005 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 0.5138 -0.8900 24 1 3.1167 0.7742 1.8410 25 1 2.2140 2.3479 1.9410 26 1 5.5961 1.2033 0.7688 27 1 7.6105 0.7367 1.4147 28 1 10.1377 0.3046 3.4174 29 1 10.1379 0.1329 1.6458 30 1 11.2178 1.3136 2.4256 31 1 10.4719 3.5979 4.5463 32 1 11.8304 3.1582 2.0185 33 1 9.4111 6.2429 3.5555 34 1 11.8370 6.1467 3.7179 35 1 7.9510 4.8339 2.7878 36 1 3.3384 1.8471 -1.6848 37 1 3.9088 0.4213 -0.7137 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_13287730.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:58 Heat of formation + Delta-G solvation = -26.252503 kcal Electronic energy + Delta-G solvation = -20128.160958 eV Core-core repulsion = 16874.485790 eV Total energy + Delta-G solvation = -3253.675168 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -42.47485 -40.92725 -39.38958 -37.91647 -37.13124 -34.14001 -33.66649 -31.33717 -28.04049 -27.57045 -26.74995 -26.43312 -24.99593 -23.15389 -21.26707 -20.81688 -20.48085 -18.95950 -18.14172 -17.35763 -16.97715 -16.80249 -16.76792 -16.16564 -15.92122 -15.79368 -15.44876 -15.33201 -15.05098 -14.82661 -14.40999 -14.05414 -13.54995 -13.48787 -13.41037 -13.38319 -13.06476 -12.75906 -12.26737 -12.11162 -12.06326 -11.95971 -11.83811 -10.77993 -10.72515 -10.46291 -9.93200 -9.54850 -9.21295 -5.01496 0.77584 1.04523 1.39693 1.64535 1.85815 2.03632 2.27102 2.68914 2.94505 3.11907 3.46483 3.53330 3.57124 3.78075 3.79427 3.86304 3.87300 4.17390 4.21968 4.31678 4.35594 4.44298 4.45758 4.50444 4.59558 4.70987 4.72541 4.77253 4.88439 4.95197 4.99350 5.01243 5.16251 5.59306 5.71402 5.96660 6.14872 6.23588 6.28883 6.69323 7.48795 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.063 3.937 4 H 0.093 0.907 5 C -0.169 4.169 6 C 0.127 3.873 7 H 0.120 0.880 8 N -0.719 5.719 9 C 0.593 3.407 10 O -0.543 6.543 11 C -0.228 4.228 12 C 0.051 3.949 13 N -0.424 5.424 14 C 0.049 3.951 15 C -0.021 4.021 16 C -0.043 4.043 17 O -0.542 6.542 18 Si 0.716 3.284 19 C -0.136 4.136 20 C -0.144 4.144 21 H 0.086 0.914 22 H 0.043 0.957 23 H 0.043 0.957 24 H 0.093 0.907 25 H 0.075 0.925 26 H 0.398 0.602 27 H 0.171 0.829 28 H 0.073 0.927 29 H 0.082 0.918 30 H 0.114 0.886 31 H 0.118 0.882 32 H 0.381 0.619 33 H -0.251 1.251 34 H -0.252 1.252 35 H 0.152 0.848 36 H 0.082 0.918 37 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.973 -3.603 -3.249 5.237 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.005 3.995 4 H 0.110 0.890 5 C -0.208 4.208 6 C 0.022 3.978 7 H 0.137 0.863 8 N -0.370 5.370 9 C 0.382 3.618 10 O -0.420 6.420 11 C -0.238 4.238 12 C -0.085 4.085 13 N -0.098 5.098 14 C -0.092 4.092 15 C -0.130 4.130 16 C -0.153 4.153 17 O -0.348 6.348 18 Si 0.615 3.385 19 C -0.160 4.160 20 C -0.182 4.182 21 H 0.105 0.895 22 H 0.061 0.939 23 H 0.062 0.938 24 H 0.112 0.888 25 H 0.094 0.906 26 H 0.233 0.767 27 H 0.188 0.812 28 H 0.091 0.909 29 H 0.100 0.900 30 H 0.132 0.868 31 H 0.135 0.865 32 H 0.229 0.771 33 H -0.175 1.175 34 H -0.177 1.177 35 H 0.169 0.831 36 H 0.100 0.900 37 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 2.091 -2.536 -2.149 3.927 hybrid contribution -0.408 -1.025 0.368 1.163 sum 1.684 -3.561 -1.781 4.323 Atomic orbital electron populations 1.22824 0.80807 1.02999 1.00145 1.87934 1.19966 1.26975 1.94581 1.23472 0.93762 0.85697 0.96619 0.88954 1.24025 0.97601 1.01418 0.97764 1.22155 0.80614 1.00439 0.94585 0.86264 1.45725 1.14657 1.14145 1.62462 1.17432 0.84221 0.83812 0.76373 1.90780 1.71001 1.23981 1.56263 1.20294 0.95285 0.94911 1.13310 1.21940 0.85474 0.99270 1.01822 1.43488 1.12065 1.09402 1.44845 1.22578 0.92276 0.91034 1.03280 1.20748 0.98816 0.85036 1.08379 1.24844 0.81185 1.09002 1.00252 1.86447 1.42949 1.76945 1.28456 0.94068 0.80907 0.72380 0.91097 1.21726 0.91671 0.99572 1.03031 1.23624 0.95637 1.00390 0.98548 0.89524 0.93866 0.93809 0.88832 0.90620 0.76707 0.81223 0.90858 0.89952 0.86772 0.86498 0.77103 1.17487 1.17670 0.83061 0.89974 0.88605 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.63 10.71 -35.23 -0.38 -1.01 16 3 C 0.06 0.00 4.31 -25.92 -0.11 -0.11 16 4 H 0.09 -0.11 7.87 -51.93 -0.41 -0.51 16 5 C -0.17 -0.09 7.71 -25.92 -0.20 -0.29 16 6 C 0.13 0.07 4.24 -67.12 -0.28 -0.22 16 7 H 0.12 0.22 7.46 -51.93 -0.39 -0.17 16 8 N -0.72 -0.40 5.34 -54.14 -0.29 -0.69 16 9 C 0.59 2.28 7.81 -12.59 -0.10 2.18 16 10 O -0.54 -4.29 16.57 5.26 0.09 -4.20 16 11 C -0.23 -0.54 6.29 -103.35 -0.65 -1.19 16 12 C 0.05 -0.03 10.83 -16.85 -0.18 -0.21 16 13 N -0.42 0.29 3.09 -119.89 -0.37 -0.08 16 14 C 0.05 -0.16 10.71 59.85 0.64 0.48 16 15 C -0.02 -0.01 6.14 -81.86 -0.50 -0.51 16 16 C -0.04 0.04 2.98 36.01 0.11 0.14 16 17 O -0.54 1.03 9.95 -35.23 -0.35 0.68 16 18 Si 0.72 -0.79 31.30 -169.99 -5.32 -6.11 16 19 C -0.14 -0.35 9.49 -37.50 -0.36 -0.70 16 20 C -0.14 0.13 7.66 -25.92 -0.20 -0.07 16 21 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 22 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 23 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 24 H 0.09 0.08 8.14 -51.93 -0.42 -0.34 16 25 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 26 H 0.40 -0.87 7.67 -40.82 -0.31 -1.19 16 27 H 0.17 -0.68 7.45 -52.48 -0.39 -1.07 16 28 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 29 H 0.08 -0.41 8.13 -51.93 -0.42 -0.84 16 30 H 0.11 -0.42 4.93 -51.93 -0.26 -0.68 16 31 H 0.12 -0.04 7.96 -51.93 -0.41 -0.46 16 32 H 0.38 -2.06 8.38 45.56 0.38 -1.68 16 33 H -0.25 -0.45 6.77 56.52 0.38 -0.07 16 34 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 35 H 0.15 0.46 6.67 -52.49 -0.35 0.11 16 36 H 0.08 -0.12 8.14 -51.92 -0.42 -0.55 16 37 H 0.10 -0.12 8.12 -51.93 -0.42 -0.54 16 LS Contribution 311.51 15.07 4.69 4.69 Total: 0.00 -8.77 311.51 -7.82 -16.59 By element: Atomic # 1 Polarization: -5.29 SS G_CDS: -5.16 Total: -10.45 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -0.74 Total: 0.58 kcal Atomic # 7 Polarization: -0.12 SS G_CDS: -0.66 Total: -0.78 kcal Atomic # 8 Polarization: -3.89 SS G_CDS: -0.64 Total: -4.53 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.32 Total: -6.11 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -8.77 -7.82 -16.59 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13287730.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.658 kcal (2) G-P(sol) polarization free energy of solvation -8.772 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.430 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.823 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.595 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.253 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds