Wall clock time and date at job start Mon Mar 8 2021 04:09:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42900 * 113.99945 * 2 1 4 4 H 1.09006 * 112.90452 * 341.24353 * 3 2 1 5 5 C 1.53773 * 113.61730 * 112.50188 * 3 2 1 6 6 C 1.53784 * 87.08380 * 139.98294 * 5 3 2 7 7 H 1.08999 * 113.69227 * 89.12673 * 6 5 3 8 8 N 1.46495 * 113.61345 * 220.02147 * 6 5 3 9 9 C 1.34781 * 119.99982 * 252.49478 * 8 6 5 10 10 O 1.21624 * 119.99768 * 359.97438 * 9 8 6 11 11 C 1.47267 * 120.00198 * 180.02562 * 9 8 6 12 12 C 1.36768 * 126.94079 * 359.67912 * 11 9 8 13 13 N 1.34652 * 108.39821 * 180.26313 * 12 11 9 14 14 C 1.46501 * 124.85658 * 180.02562 * 13 12 11 15 15 C 1.36448 * 110.29557 * 0.02562 * 13 12 11 16 16 C 1.50707 * 125.57195 * 179.97438 * 15 13 12 17 17 O 1.42898 * 109.46699 * 29.99864 * 16 15 13 18 18 Si 1.86301 * 109.47136 * 149.99945 * 16 15 13 19 19 C 1.34480 * 108.86015 * 359.97438 * 15 13 12 20 20 C 1.53780 * 113.61171 * 209.99915 * 3 2 1 21 21 H 1.09004 * 109.46615 * 180.02562 * 1 2 3 22 22 H 1.09001 * 109.47040 * 299.99941 * 1 2 3 23 23 H 1.08997 * 109.46803 * 60.00331 * 1 2 3 24 24 H 1.08999 * 113.61961 * 25.43333 * 5 3 2 25 25 H 1.09006 * 113.61323 * 254.52587 * 5 3 2 26 26 H 0.97004 * 120.00288 * 72.49268 * 8 6 5 27 27 H 1.08008 * 125.80254 * 0.24362 * 12 11 9 28 28 H 1.09005 * 109.46968 * 270.00656 * 14 13 12 29 29 H 1.09002 * 109.46840 * 29.99982 * 14 13 12 30 30 H 1.08999 * 109.47361 * 150.00056 * 14 13 12 31 31 H 1.08996 * 109.46985 * 269.99901 * 16 15 13 32 32 H 0.96698 * 114.00473 * 60.00628 * 17 16 15 33 33 H 1.48496 * 109.99907 * 58.67929 * 18 16 15 34 34 H 1.48502 * 109.99960 * 180.02562 * 18 16 15 35 35 H 1.07996 * 126.83831 * 179.97438 * 19 15 13 36 36 H 1.09007 * 113.61448 * 105.47214 * 20 3 2 37 37 H 1.08990 * 113.61624 * 334.56319 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3142 2.0797 -0.3229 5 6 2.7534 1.6489 1.3017 6 6 3.8227 2.3183 0.4221 7 1 3.6235 3.3695 0.2142 8 7 5.1934 2.0788 0.8803 9 6 5.8950 3.0748 1.4567 10 8 5.3902 4.1725 1.5961 11 6 7.2731 2.8342 1.9168 12 6 7.9738 1.6624 1.8363 13 7 9.1932 1.8587 2.3725 14 6 10.2386 0.8371 2.4717 15 6 9.3163 3.1451 2.8103 16 6 10.5379 3.7347 3.4670 17 8 11.7073 3.0778 2.9742 18 14 10.6361 5.5537 3.0765 19 6 8.1693 3.8011 2.5600 20 6 3.3755 1.3718 -0.7045 21 1 -0.3633 -1.0277 0.0005 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 0.5138 -0.8900 24 1 3.1167 0.7742 1.8410 25 1 2.2140 2.3479 1.9410 26 1 5.5961 1.2033 0.7688 27 1 7.6105 0.7367 1.4147 28 1 10.1377 0.3046 3.4174 29 1 10.1379 0.1329 1.6458 30 1 11.2178 1.3136 2.4256 31 1 10.4719 3.5979 4.5463 32 1 11.8304 3.1582 2.0185 33 1 9.4111 6.2429 3.5555 34 1 11.8370 6.1467 3.7179 35 1 7.9510 4.8339 2.7878 36 1 3.3384 1.8471 -1.6848 37 1 3.9088 0.4213 -0.7137 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_13287730.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:57 Heat of formation + Delta-G solvation = -27.682238 kcal Electronic energy + Delta-G solvation = -20128.222956 eV Core-core repulsion = 16874.485790 eV Total energy + Delta-G solvation = -3253.737166 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.48335 -41.01301 -39.55778 -37.80984 -37.21473 -34.29832 -33.62308 -31.33602 -27.98832 -27.47589 -26.75202 -26.42479 -25.00610 -23.22282 -21.36807 -20.83316 -20.50086 -18.94125 -18.18444 -17.28324 -17.04343 -16.81846 -16.75005 -16.20070 -15.95497 -15.72611 -15.44888 -15.41655 -15.11042 -14.80871 -14.52362 -14.07498 -13.51054 -13.46163 -13.43852 -13.25269 -12.99779 -12.74826 -12.23119 -12.12408 -12.10422 -12.07044 -11.84818 -11.02089 -10.69888 -10.47582 -10.10626 -9.58280 -9.23335 -4.99516 0.71417 1.01912 1.37662 1.63269 1.88795 2.04328 2.22216 2.50539 2.96257 3.29081 3.45275 3.54862 3.56550 3.82276 3.86132 3.90690 3.96745 4.27372 4.38788 4.39844 4.42882 4.51148 4.53708 4.54852 4.72482 4.73764 4.80832 4.85512 4.92094 4.96140 4.97407 4.98448 5.10875 5.51709 5.62684 5.95189 6.23227 6.25547 6.58732 6.62792 7.31165 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.395 6.395 3 C 0.062 3.938 4 H 0.102 0.898 5 C -0.168 4.168 6 C 0.123 3.877 7 H 0.102 0.898 8 N -0.703 5.703 9 C 0.588 3.412 10 O -0.598 6.598 11 C -0.262 4.262 12 C 0.076 3.924 13 N -0.421 5.421 14 C 0.045 3.955 15 C -0.015 4.015 16 C -0.034 4.034 17 O -0.544 6.544 18 Si 0.787 3.213 19 C -0.167 4.167 20 C -0.130 4.130 21 H 0.093 0.907 22 H 0.045 0.955 23 H 0.053 0.947 24 H 0.092 0.908 25 H 0.065 0.935 26 H 0.414 0.586 27 H 0.210 0.790 28 H 0.073 0.927 29 H 0.108 0.892 30 H 0.119 0.881 31 H 0.115 0.885 32 H 0.398 0.602 33 H -0.299 1.299 34 H -0.284 1.284 35 H 0.132 0.868 36 H 0.092 0.908 37 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.868 -5.879 -4.197 7.772 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.314 6.314 3 C 0.003 3.997 4 H 0.120 0.880 5 C -0.208 4.208 6 C 0.017 3.983 7 H 0.120 0.880 8 N -0.354 5.354 9 C 0.379 3.621 10 O -0.480 6.480 11 C -0.272 4.272 12 C -0.062 4.062 13 N -0.094 5.094 14 C -0.095 4.095 15 C -0.124 4.124 16 C -0.145 4.145 17 O -0.352 6.352 18 Si 0.693 3.307 19 C -0.192 4.192 20 C -0.168 4.168 21 H 0.112 0.888 22 H 0.064 0.936 23 H 0.071 0.929 24 H 0.110 0.890 25 H 0.084 0.916 26 H 0.251 0.749 27 H 0.226 0.774 28 H 0.092 0.908 29 H 0.126 0.874 30 H 0.137 0.863 31 H 0.132 0.868 32 H 0.249 0.751 33 H -0.227 1.227 34 H -0.211 1.211 35 H 0.150 0.850 36 H 0.110 0.890 37 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 3.011 -4.877 -3.132 6.532 hybrid contribution -0.686 -0.328 0.694 1.029 sum 2.325 -5.205 -2.438 6.200 Atomic orbital electron populations 1.22958 0.79892 1.03711 1.00738 1.87897 1.21119 1.27710 1.94666 1.23550 0.94340 0.85563 0.96218 0.88007 1.24001 0.97690 1.01040 0.98020 1.22128 0.80575 0.99983 0.95595 0.88001 1.45584 1.14430 1.14201 1.61156 1.17750 0.84886 0.83499 0.75970 1.90741 1.72254 1.26191 1.58776 1.20288 0.95078 0.96400 1.15473 1.22419 0.84768 0.99333 0.99636 1.43736 1.12597 1.09330 1.43776 1.22808 0.91532 0.90701 1.04427 1.20762 0.98348 0.85622 1.07702 1.24691 0.81257 1.08561 0.99996 1.86425 1.41988 1.76601 1.30204 0.93213 0.76469 0.71146 0.89907 1.21725 0.93198 0.99386 1.04858 1.23552 0.94790 1.00224 0.98244 0.88821 0.93630 0.92884 0.88992 0.91579 0.74859 0.77383 0.90806 0.87360 0.86267 0.86823 0.75101 1.22689 1.21073 0.85050 0.88985 0.87682 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.40 -1.15 10.71 -148.98 -1.60 -2.74 16 3 C 0.06 0.00 4.31 31.12 0.13 0.13 16 4 H 0.10 -0.23 7.87 -2.38 -0.02 -0.25 16 5 C -0.17 -0.29 7.71 31.12 0.24 -0.05 16 6 C 0.12 0.22 4.24 45.52 0.19 0.41 16 7 H 0.10 0.58 7.46 -2.39 -0.02 0.56 16 8 N -0.70 -1.01 5.34 -443.44 -2.37 -3.38 16 9 C 0.59 5.50 7.81 86.62 0.68 6.18 16 10 O -0.60 -11.40 16.57 -4.11 -0.07 -11.46 16 11 C -0.26 -1.47 6.29 -19.04 -0.12 -1.59 16 12 C 0.08 -0.20 10.83 83.92 0.91 0.71 16 13 N -0.42 1.22 3.09 -533.23 -1.65 -0.42 16 14 C 0.04 -0.41 10.71 127.77 1.37 0.96 16 15 C -0.01 -0.02 6.14 40.98 0.25 0.24 16 16 C -0.03 0.06 2.98 71.24 0.21 0.27 16 17 O -0.54 2.82 9.95 -148.98 -1.48 1.33 16 18 Si 0.79 -0.58 31.30 68.60 2.15 1.57 16 19 C -0.17 -1.17 9.49 23.62 0.22 -0.94 16 20 C -0.13 0.31 7.66 31.12 0.24 0.55 16 21 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 22 H 0.04 -0.10 8.14 -2.39 -0.02 -0.12 16 23 H 0.05 -0.18 8.14 -2.39 -0.02 -0.20 16 24 H 0.09 0.19 8.14 -2.39 -0.02 0.17 16 25 H 0.07 0.23 8.14 -2.38 -0.02 0.21 16 26 H 0.41 -2.28 7.67 -92.71 -0.71 -2.99 16 27 H 0.21 -2.37 7.45 -2.91 -0.02 -2.40 16 28 H 0.07 -0.62 8.14 -2.38 -0.02 -0.64 16 29 H 0.11 -1.51 8.13 -2.39 -0.02 -1.53 16 30 H 0.12 -1.19 4.93 -2.39 -0.01 -1.20 16 31 H 0.11 -0.07 7.96 -2.39 -0.02 -0.09 16 32 H 0.40 -5.06 8.38 -74.06 -0.62 -5.68 16 33 H -0.30 -2.18 6.77 99.48 0.67 -1.50 16 34 H -0.28 -1.29 7.11 99.48 0.71 -0.58 16 35 H 0.13 1.32 6.67 -2.91 -0.02 1.31 16 36 H 0.09 -0.37 8.14 -2.38 -0.02 -0.38 16 37 H 0.10 -0.42 8.12 -2.39 -0.02 -0.44 16 Total: 0.00 -23.45 311.51 0.31 -23.14 By element: Atomic # 1 Polarization: -15.85 SS G_CDS: -0.23 Total: -16.09 kcal Atomic # 6 Polarization: 2.49 SS G_CDS: 5.56 Total: 8.05 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -4.02 Total: -3.80 kcal Atomic # 8 Polarization: -9.73 SS G_CDS: -3.15 Total: -12.87 kcal Atomic # 14 Polarization: -0.58 SS G_CDS: 2.15 Total: 1.57 kcal Total: -23.45 0.31 -23.14 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13287730.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.542 kcal (2) G-P(sol) polarization free energy of solvation -23.448 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.990 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.140 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.682 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds