Wall clock time and date at job start Mon Mar 8 2021 04:10:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42893 * 114.00008 * 2 1 4 4 H 1.09002 * 112.85419 * 341.19377 * 3 2 1 5 5 C 1.53781 * 113.69112 * 112.46478 * 3 2 1 6 6 C 1.53784 * 87.08293 * 139.99190 * 5 3 2 7 7 H 1.08997 * 113.69000 * 89.12521 * 6 5 3 8 8 N 1.46499 * 113.61282 * 220.01857 * 6 5 3 9 9 C 1.34775 * 120.00062 * 252.49808 * 8 6 5 10 10 O 1.21287 * 119.99814 * 359.97438 * 9 8 6 11 11 C 1.50706 * 120.00164 * 179.72508 * 9 8 6 12 12 C 1.50699 * 109.47171 * 180.26945 * 11 9 8 13 13 C 1.38274 * 119.93525 * 269.72830 * 12 11 9 14 14 C 1.38124 * 120.06080 * 179.76706 * 13 12 11 15 15 C 1.38827 * 119.93600 * 0.52767 * 14 13 12 16 16 N 1.40198 * 120.06491 * 179.70181 * 15 14 13 17 17 C 1.36578 * 125.66638 * 236.09841 * 16 15 14 18 18 C 1.34854 * 108.19447 * 179.83146 * 17 16 15 19 19 C 1.40940 * 107.47249 * 0.42482 * 18 17 16 20 20 C 1.34850 * 107.46474 * 359.73385 * 19 18 17 21 21 C 1.50704 * 125.89563 * 180.02562 * 20 19 18 22 22 O 1.42908 * 109.46545 * 218.09266 * 21 20 19 23 23 Si 1.86294 * 109.47393 * 338.09153 * 21 20 19 24 24 C 1.38829 * 119.86915 * 359.72453 * 15 14 13 25 25 C 1.38124 * 119.93312 * 359.97438 * 24 15 14 26 26 C 1.53779 * 87.07721 * 334.56569 * 6 5 3 27 27 H 1.08998 * 109.47322 * 300.00172 * 1 2 3 28 28 H 1.09004 * 109.46784 * 60.00419 * 1 2 3 29 29 H 1.09001 * 109.47694 * 179.97438 * 1 2 3 30 30 H 1.08998 * 113.61911 * 25.44066 * 5 3 2 31 31 H 1.09002 * 113.61441 * 254.54064 * 5 3 2 32 32 H 0.96997 * 120.00040 * 72.49125 * 8 6 5 33 33 H 1.08996 * 109.46700 * 300.27762 * 11 9 8 34 34 H 1.09004 * 109.46898 * 60.27506 * 11 9 8 35 35 H 1.07990 * 119.96823 * 0.02562 * 13 12 11 36 36 H 1.08001 * 120.03164 * 180.25396 * 14 13 12 37 37 H 1.07994 * 125.90205 * 359.97438 * 17 16 15 38 38 H 1.07999 * 126.26258 * 180.15864 * 18 17 16 39 39 H 1.07995 * 126.26781 * 179.75559 * 19 18 17 40 40 H 1.08993 * 109.47275 * 98.09897 * 21 20 19 41 41 H 0.96708 * 113.99260 * 179.97438 * 22 21 20 42 42 H 1.48500 * 110.00222 * 300.00421 * 23 21 20 43 43 H 1.48506 * 109.99988 * 61.32104 * 23 21 20 44 44 H 1.07998 * 120.03083 * 179.97438 * 24 15 14 45 45 H 1.07998 * 119.96356 * 180.02562 * 25 24 15 46 46 H 1.09009 * 113.61265 * 139.98333 * 26 6 5 47 47 H 1.09006 * 113.61373 * 270.88302 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0789 -0.3238 5 6 2.7531 1.6510 1.3014 6 6 3.8220 2.3199 0.4210 7 1 3.6221 3.3707 0.2117 8 7 5.1928 2.0818 0.8796 9 6 5.8937 3.0790 1.4548 10 8 5.3897 4.1735 1.5924 11 6 7.3018 2.8324 1.9322 12 6 7.8555 4.0964 2.5377 13 6 8.5351 5.0017 1.7437 14 6 9.0396 6.1634 2.2950 15 6 8.8732 6.4164 3.6498 16 7 9.3895 7.5917 4.2135 17 6 10.2577 7.6555 5.2658 18 6 10.5246 8.9540 5.5134 19 6 9.7885 9.7211 4.5882 20 6 9.1034 8.8631 3.8053 21 6 8.1816 9.2419 2.6748 22 8 7.0552 8.3625 2.6637 23 14 7.5981 10.9954 2.9101 24 6 8.1949 5.5031 4.4455 25 6 7.6872 4.3461 3.8874 26 6 3.3755 1.3718 -0.7044 27 1 -0.3634 0.5138 0.8899 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3634 -1.0276 -0.0005 30 1 3.1168 0.7771 1.8418 31 1 2.2132 2.3503 1.9398 32 1 5.5960 1.2065 0.7693 33 1 7.2978 2.0415 2.6822 34 1 7.9236 2.5307 1.0893 35 1 8.6680 4.8023 0.6907 36 1 9.5668 6.8721 1.6735 37 1 10.6625 6.8118 5.8049 38 1 11.1789 9.3362 6.2829 39 1 9.7757 10.7988 4.5186 40 1 8.7153 9.1605 1.7280 41 1 6.4180 8.5485 1.9604 42 1 6.8688 11.1196 4.1977 43 1 8.7575 11.9233 2.8917 44 1 8.0643 5.6971 5.4999 45 1 7.1591 3.6355 4.5058 46 1 3.3382 1.8457 -1.6854 47 1 3.9095 0.4215 -0.7124 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_13287746.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:04 Heat of formation + Delta-G solvation = 5.250807 kcal Electronic energy + Delta-G solvation = -29213.437838 eV Core-core repulsion = 25137.148956 eV Total energy + Delta-G solvation = -4076.288882 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.55377 -41.32705 -40.26908 -39.30329 -37.53278 -37.26518 -34.78744 -34.13099 -32.06723 -31.71622 -31.06040 -28.21929 -27.61489 -26.82860 -25.85865 -24.95918 -23.87018 -23.12120 -21.54714 -21.38915 -21.00443 -20.39589 -18.62894 -18.29919 -18.21593 -18.04960 -17.05983 -16.95689 -16.63214 -16.23399 -15.98181 -15.91748 -15.67764 -15.52293 -15.26036 -15.05912 -14.69377 -14.52601 -14.42660 -14.40705 -14.06188 -13.63762 -13.56590 -13.37758 -13.13464 -13.05094 -12.99281 -12.84010 -12.61343 -12.57842 -12.19594 -12.17911 -12.04956 -11.91768 -11.81586 -10.87041 -10.53331 -10.43168 -10.14211 -10.05161 -9.89148 -9.12725 -8.93383 -4.92911 0.12336 0.44835 1.13103 1.46077 1.63743 1.75320 2.03847 2.05295 2.08766 2.20115 2.74005 2.90570 3.36953 3.37009 3.46848 3.58316 3.73119 3.77940 3.79839 3.86157 3.94150 3.98272 4.16135 4.23951 4.25422 4.32952 4.40262 4.41074 4.41746 4.45011 4.52026 4.62466 4.63189 4.64279 4.69259 4.72070 4.85527 4.88824 4.90982 5.02133 5.02756 5.27890 5.28543 5.32341 5.46280 5.46862 5.56043 5.85298 6.02552 6.17302 6.28785 6.45832 6.61251 6.69120 7.22753 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.063 3.937 4 H 0.092 0.908 5 C -0.169 4.169 6 C 0.125 3.875 7 H 0.119 0.881 8 N -0.721 5.721 9 C 0.515 3.485 10 O -0.524 6.524 11 C -0.104 4.104 12 C -0.064 4.064 13 C -0.090 4.090 14 C -0.099 4.099 15 C 0.139 3.861 16 N -0.388 5.388 17 C -0.006 4.006 18 C -0.188 4.188 19 C -0.202 4.202 20 C 0.039 3.961 21 C -0.050 4.050 22 O -0.540 6.540 23 Si 0.710 3.290 24 C -0.110 4.110 25 C -0.089 4.089 26 C -0.144 4.144 27 H 0.043 0.957 28 H 0.043 0.957 29 H 0.087 0.913 30 H 0.094 0.906 31 H 0.075 0.925 32 H 0.403 0.597 33 H 0.106 0.894 34 H 0.106 0.894 35 H 0.127 0.873 36 H 0.123 0.877 37 H 0.166 0.834 38 H 0.143 0.857 39 H 0.138 0.862 40 H 0.071 0.929 41 H 0.383 0.617 42 H -0.252 1.252 43 H -0.255 1.255 44 H 0.126 0.874 45 H 0.127 0.873 46 H 0.081 0.919 47 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.508 -3.590 -4.335 5.827 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.110 0.890 5 C -0.208 4.208 6 C 0.020 3.980 7 H 0.136 0.864 8 N -0.373 5.373 9 C 0.301 3.699 10 O -0.399 6.399 11 C -0.143 4.143 12 C -0.064 4.064 13 C -0.108 4.108 14 C -0.118 4.118 15 C 0.049 3.951 16 N -0.061 5.061 17 C -0.133 4.133 18 C -0.212 4.212 19 C -0.226 4.226 20 C -0.071 4.071 21 C -0.160 4.160 22 O -0.346 6.346 23 Si 0.609 3.391 24 C -0.129 4.129 25 C -0.108 4.108 26 C -0.182 4.182 27 H 0.062 0.938 28 H 0.062 0.938 29 H 0.105 0.895 30 H 0.112 0.888 31 H 0.094 0.906 32 H 0.237 0.763 33 H 0.124 0.876 34 H 0.124 0.876 35 H 0.145 0.855 36 H 0.141 0.859 37 H 0.184 0.816 38 H 0.161 0.839 39 H 0.156 0.844 40 H 0.089 0.911 41 H 0.231 0.769 42 H -0.177 1.177 43 H -0.180 1.180 44 H 0.144 0.856 45 H 0.145 0.855 46 H 0.100 0.900 47 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -1.527 -2.765 -3.348 4.603 hybrid contribution 0.399 -0.672 0.192 0.805 sum -1.128 -3.437 -3.157 4.801 Atomic orbital electron populations 1.22831 0.80724 1.03076 1.00159 1.87935 1.20034 1.26883 1.94565 1.23458 0.93768 0.85780 0.96524 0.88977 1.24016 0.97557 1.01399 0.97799 1.22178 0.80665 1.00404 0.94760 0.86357 1.45933 1.14778 1.14364 1.62225 1.20599 0.87579 0.84417 0.77307 1.90765 1.70862 1.23811 1.54463 1.20693 0.93611 0.97345 1.02692 1.19252 0.98082 0.95497 0.93595 1.20779 0.97420 0.93157 0.99477 1.20867 1.00168 0.97429 0.93319 1.17562 0.98431 0.86296 0.92795 1.41440 1.34783 1.03781 1.26111 1.22001 0.98623 0.99150 0.93569 1.20873 1.05323 0.92087 1.02918 1.20628 1.03899 0.98428 0.99647 1.19991 1.02605 0.83395 1.01092 1.24415 0.88401 1.06356 0.96803 1.86555 1.33730 1.57034 1.57293 0.95540 0.83825 0.73325 0.86387 1.20985 0.97489 0.94359 1.00116 1.20797 0.98709 0.96809 0.94482 1.23629 0.95714 1.00401 0.98493 0.93841 0.93795 0.89453 0.88764 0.90630 0.76271 0.87625 0.87593 0.85497 0.85898 0.81626 0.83892 0.84416 0.91143 0.76934 1.17657 1.17987 0.85600 0.85490 0.89997 0.88488 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.41 10.72 -35.23 -0.38 -0.79 16 3 C 0.06 -0.05 4.31 -25.92 -0.11 -0.16 16 4 H 0.09 -0.17 7.87 -51.93 -0.41 -0.58 16 5 C -0.17 0.10 7.71 -25.92 -0.20 -0.10 16 6 C 0.13 -0.11 4.24 -67.12 -0.28 -0.39 16 7 H 0.12 0.06 7.46 -51.93 -0.39 -0.33 16 8 N -0.72 1.15 5.35 -53.02 -0.28 0.87 16 9 C 0.51 0.32 7.82 -10.98 -0.09 0.23 16 10 O -0.52 -2.62 15.63 5.55 0.09 -2.54 16 11 C -0.10 0.19 5.83 -29.03 -0.17 0.02 16 12 C -0.06 -0.06 4.38 -104.59 -0.46 -0.52 16 13 C -0.09 -0.11 9.69 -39.61 -0.38 -0.50 16 14 C -0.10 -0.26 8.61 -39.41 -0.34 -0.60 16 15 C 0.14 0.53 4.66 -83.59 -0.39 0.14 16 16 N -0.39 -1.81 2.84 -56.73 -0.16 -1.97 16 17 C -0.01 -0.02 11.21 -16.64 -0.19 -0.21 16 18 C -0.19 -0.74 10.86 -39.76 -0.43 -1.17 16 19 C -0.20 -0.97 9.39 -39.76 -0.37 -1.34 16 20 C 0.04 0.19 6.13 -81.68 -0.50 -0.31 16 21 C -0.05 -0.10 2.47 36.01 0.09 -0.01 16 22 O -0.54 -1.34 10.92 -35.23 -0.38 -1.72 16 23 Si 0.71 0.35 30.96 -169.99 -5.26 -4.91 16 24 C -0.11 -0.34 9.77 -39.40 -0.38 -0.72 16 25 C -0.09 -0.15 9.69 -39.61 -0.38 -0.54 16 26 C -0.14 0.26 7.66 -25.92 -0.20 0.06 16 27 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 29 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 30 H 0.09 -0.02 8.14 -51.93 -0.42 -0.45 16 31 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 32 H 0.40 -1.69 8.73 -40.82 -0.36 -2.05 16 33 H 0.11 -0.40 8.08 -51.93 -0.42 -0.82 16 34 H 0.11 -0.43 8.08 -51.93 -0.42 -0.85 16 35 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 36 H 0.12 0.25 8.06 -52.49 -0.42 -0.18 16 37 H 0.17 0.19 8.06 -52.49 -0.42 -0.24 16 38 H 0.14 0.27 8.06 -52.49 -0.42 -0.15 16 39 H 0.14 0.53 6.50 -52.49 -0.34 0.19 16 40 H 0.07 0.02 7.96 -51.93 -0.41 -0.39 16 41 H 0.38 -0.77 8.74 45.56 0.40 -0.37 16 42 H -0.25 -1.10 7.11 56.52 0.40 -0.70 16 43 H -0.25 -0.64 6.97 56.52 0.39 -0.24 16 44 H 0.13 0.32 8.06 -52.49 -0.42 -0.11 16 45 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 46 H 0.08 -0.19 8.14 -51.92 -0.42 -0.61 16 47 H 0.10 -0.19 8.12 -51.93 -0.42 -0.61 16 LS Contribution 394.54 15.07 5.95 5.95 Total: 0.00 -10.42 394.54 -11.18 -21.60 By element: Atomic # 1 Polarization: -4.38 SS G_CDS: -7.05 Total: -11.43 kcal Atomic # 6 Polarization: -1.35 SS G_CDS: -3.70 Total: -5.05 kcal Atomic # 7 Polarization: -0.66 SS G_CDS: -0.44 Total: -1.10 kcal Atomic # 8 Polarization: -4.37 SS G_CDS: -0.68 Total: -5.05 kcal Atomic # 14 Polarization: 0.35 SS G_CDS: -5.26 Total: -4.91 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -10.42 -11.18 -21.60 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13287746.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.851 kcal (2) G-P(sol) polarization free energy of solvation -10.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.434 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.601 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.251 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds