Wall clock time and date at job start Mon Mar 8 2021 04:10:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42897 * 114.00215 * 2 1 4 4 H 1.09003 * 112.84845 * 18.80463 * 3 2 1 5 5 C 1.53781 * 113.61718 * 150.00149 * 3 2 1 6 6 C 1.53781 * 87.08131 * 139.98422 * 5 3 2 7 7 H 1.09000 * 113.61724 * 89.20383 * 6 5 3 8 8 N 1.46506 * 113.61270 * 220.02225 * 6 5 3 9 9 C 1.34777 * 119.99873 * 203.47288 * 8 6 5 10 10 O 1.21557 * 119.99929 * 359.97438 * 9 8 6 11 11 C 1.47836 * 120.00184 * 180.02562 * 9 8 6 12 12 C 1.39530 * 120.55690 * 359.71385 * 11 9 8 13 13 N 1.31688 * 120.56563 * 179.77792 * 12 11 9 14 14 C 1.31930 * 121.87943 * 0.49631 * 13 12 11 15 15 C 1.38346 * 121.08169 * 359.76611 * 14 13 12 16 16 C 1.50705 * 120.35352 * 179.97438 * 15 14 13 17 17 O 1.42893 * 109.47097 * 120.02298 * 16 15 14 18 18 Si 1.86302 * 109.46537 * 0.02562 * 16 15 14 19 19 C 1.38358 * 119.30295 * 359.97438 * 15 14 13 20 20 C 1.53782 * 87.17496 * 334.60808 * 6 5 3 21 21 H 1.08997 * 109.47010 * 59.99688 * 1 2 3 22 22 H 1.09002 * 109.46817 * 179.97438 * 1 2 3 23 23 H 1.08999 * 109.46447 * 299.99684 * 1 2 3 24 24 H 1.09003 * 113.61141 * 25.43245 * 5 3 2 25 25 H 1.08995 * 113.69218 * 254.54359 * 5 3 2 26 26 H 0.96995 * 120.00050 * 23.19403 * 8 6 5 27 27 H 1.07998 * 119.71510 * 0.02562 * 12 11 9 28 28 H 1.08001 * 119.45871 * 179.75020 * 14 13 12 29 29 H 1.08997 * 109.47039 * 240.03020 * 16 15 14 30 30 H 0.96698 * 114.00431 * 300.00638 * 17 16 15 31 31 H 1.48502 * 109.99502 * 179.97438 * 18 16 15 32 32 H 1.48497 * 110.00033 * 301.31762 * 18 16 15 33 33 H 1.07998 * 120.85929 * 179.97438 * 19 15 14 34 34 H 1.08994 * 113.61532 * 139.93563 * 20 6 5 35 35 H 1.08994 * 113.61779 * 270.84917 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0789 0.3238 5 6 3.3756 1.3719 0.7045 6 6 3.8227 2.3182 -0.4222 7 1 3.6236 3.3694 -0.2143 8 7 5.1935 2.0786 -0.8805 9 6 5.8842 3.0656 -1.4847 10 8 5.3697 4.1545 -1.6498 11 6 7.2673 2.8238 -1.9476 12 6 7.8709 1.5800 -1.7596 13 7 9.1013 1.3630 -2.1758 14 6 9.8110 2.3020 -2.7718 15 6 9.2863 3.5632 -2.9906 16 6 10.1119 4.6237 -3.6725 17 8 9.4532 5.0441 -4.8688 18 14 11.7872 3.9285 -4.0975 19 6 7.9955 3.8408 -2.5769 20 6 2.7533 1.6511 -1.3034 21 1 -0.3633 0.5139 -0.8899 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3632 0.5138 0.8900 24 1 3.9089 0.4212 0.7137 25 1 3.3399 1.8466 1.6849 26 1 5.6053 1.2109 -0.7454 27 1 7.3230 0.7872 -1.2722 28 1 10.8183 2.0825 -3.0938 29 1 10.2313 5.4766 -3.0044 30 1 9.3132 4.3348 -5.5109 31 1 12.6109 4.9644 -4.7711 32 1 12.4696 3.4584 -2.8652 33 1 7.5611 4.8168 -2.7346 34 1 2.2145 2.3514 -1.9416 35 1 3.1161 0.7770 -1.8440 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_13287814.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:07 Heat of formation + Delta-G solvation = -39.498378 kcal Electronic energy + Delta-G solvation = -19468.011235 eV Core-core repulsion = 16241.073161 eV Total energy + Delta-G solvation = -3226.938074 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 265.115 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -41.97182 -40.94972 -39.63370 -37.99823 -37.31217 -34.56305 -33.76765 -32.79859 -27.97281 -27.34583 -26.88798 -26.39429 -24.34823 -23.79750 -21.67996 -21.13830 -19.20607 -18.53655 -18.02212 -17.83358 -17.55950 -16.83924 -16.53694 -16.34979 -16.18435 -15.79879 -15.75499 -15.16017 -14.73197 -14.64109 -14.41222 -14.23047 -13.60435 -13.54237 -13.51433 -12.85387 -12.77237 -12.28895 -12.23956 -12.14383 -11.93970 -11.32755 -11.07167 -10.66741 -10.58422 -10.54317 -10.34943 -10.13291 -5.17125 -0.60252 -0.04314 1.10898 1.49532 1.68644 1.83313 1.91086 2.60706 2.81853 2.99476 3.27442 3.31962 3.36544 3.44370 3.58391 3.66963 3.71672 3.72379 3.78088 4.07827 4.14444 4.22518 4.37853 4.40436 4.41231 4.59961 4.62050 4.71656 4.80037 4.82252 4.86510 4.89251 4.97429 5.26166 5.37488 6.15904 6.30554 6.41508 6.60174 7.03302 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.144 4.144 6 C 0.124 3.876 7 H 0.121 0.879 8 N -0.712 5.712 9 C 0.567 3.433 10 O -0.528 6.528 11 C -0.189 4.189 12 C 0.140 3.860 13 N -0.477 5.477 14 C 0.128 3.872 15 C -0.180 4.180 16 C -0.064 4.064 17 O -0.536 6.536 18 Si 0.689 3.311 19 C 0.012 3.988 20 C -0.168 4.168 21 H 0.043 0.957 22 H 0.087 0.913 23 H 0.044 0.956 24 H 0.098 0.902 25 H 0.083 0.917 26 H 0.402 0.598 27 H 0.162 0.838 28 H 0.163 0.837 29 H 0.120 0.880 30 H 0.381 0.619 31 H -0.248 1.248 32 H -0.253 1.253 33 H 0.153 0.847 34 H 0.077 0.923 35 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.647 -3.367 -0.147 3.432 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.293 6.293 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.182 4.182 6 C 0.019 3.981 7 H 0.138 0.862 8 N -0.364 5.364 9 C 0.353 3.647 10 O -0.405 6.405 11 C -0.194 4.194 12 C -0.019 4.019 13 N -0.185 5.185 14 C -0.028 4.028 15 C -0.182 4.182 16 C -0.176 4.176 17 O -0.341 6.341 18 Si 0.590 3.410 19 C -0.014 4.014 20 C -0.207 4.207 21 H 0.062 0.938 22 H 0.106 0.894 23 H 0.062 0.938 24 H 0.116 0.884 25 H 0.102 0.898 26 H 0.238 0.762 27 H 0.179 0.821 28 H 0.180 0.820 29 H 0.137 0.863 30 H 0.228 0.772 31 H -0.173 1.173 32 H -0.177 1.177 33 H 0.170 0.830 34 H 0.096 0.904 35 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 0.340 -2.932 0.290 2.966 hybrid contribution -0.841 0.850 0.396 1.259 sum -0.501 -2.082 0.686 2.249 Atomic orbital electron populations 1.22837 0.80680 1.03107 1.00172 1.87938 1.20065 1.26790 1.94544 1.23476 0.93733 0.85871 0.96374 0.88879 1.23626 0.95770 1.00364 0.98439 1.22264 0.80045 1.00690 0.95062 0.86155 1.45809 1.15040 1.15151 1.60357 1.18041 0.84897 0.84252 0.77511 1.90819 1.70088 1.24024 1.55536 1.21034 0.96077 0.96735 1.05545 1.23044 0.90938 0.94459 0.93446 1.67727 1.06816 1.33722 1.10206 1.22907 0.99176 0.88187 0.92544 1.21443 0.96600 0.97211 1.02935 1.25030 1.04927 0.99184 0.88433 1.86543 1.81167 1.38842 1.27562 0.94800 0.74843 0.85884 0.85484 1.21631 0.91846 0.99273 0.88695 1.24053 0.97360 1.01477 0.97830 0.93820 0.89424 0.93780 0.88359 0.89796 0.76165 0.82133 0.82024 0.86254 0.77183 1.17286 1.17748 0.82979 0.90421 0.88611 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.36 10.72 -35.23 -0.38 -0.74 16 3 C 0.06 -0.06 4.31 -25.82 -0.11 -0.17 16 4 H 0.09 -0.19 7.87 -51.93 -0.41 -0.60 16 5 C -0.14 0.26 7.66 -25.92 -0.20 0.06 16 6 C 0.12 -0.10 4.21 -67.11 -0.28 -0.38 16 7 H 0.12 0.04 7.50 -51.93 -0.39 -0.35 16 8 N -0.71 0.67 5.32 -53.96 -0.29 0.38 16 9 C 0.57 1.03 7.78 -12.33 -0.10 0.93 16 10 O -0.53 -2.93 16.04 5.32 0.09 -2.84 16 11 C -0.19 -0.13 5.89 -104.82 -0.62 -0.75 16 12 C 0.14 -0.08 10.71 -17.13 -0.18 -0.26 16 13 N -0.48 -0.32 10.35 -12.91 -0.13 -0.46 16 14 C 0.13 -0.07 9.84 -17.47 -0.17 -0.24 16 15 C -0.18 0.08 5.39 -104.54 -0.56 -0.48 16 16 C -0.06 0.07 2.83 36.01 0.10 0.18 16 17 O -0.54 0.25 12.78 -35.23 -0.45 -0.20 16 18 Si 0.69 -1.54 29.82 -169.99 -5.07 -6.61 16 19 C 0.01 0.01 9.31 -38.87 -0.36 -0.35 16 20 C -0.17 0.11 7.73 -25.82 -0.20 -0.09 16 21 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 22 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 23 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 24 H 0.10 -0.21 8.11 -51.93 -0.42 -0.63 16 25 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 26 H 0.40 -1.41 6.78 -40.82 -0.28 -1.69 16 27 H 0.16 -0.59 6.42 -52.49 -0.34 -0.93 16 28 H 0.16 -0.45 4.88 -52.49 -0.26 -0.70 16 29 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 30 H 0.38 -1.67 8.70 45.56 0.40 -1.27 16 31 H -0.25 -0.28 7.11 56.52 0.40 0.13 16 32 H -0.25 0.03 7.11 56.52 0.40 0.43 16 33 H 0.15 0.27 7.74 -52.49 -0.41 -0.14 16 34 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 35 H 0.10 -0.03 8.14 -51.93 -0.42 -0.45 16 LS Contribution 300.55 15.07 4.53 4.53 Total: 0.00 -8.27 300.55 -7.54 -15.80 By element: Atomic # 1 Polarization: -5.14 SS G_CDS: -4.25 Total: -9.38 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -1.59 Total: -0.49 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -0.42 Total: -0.07 kcal Atomic # 8 Polarization: -3.04 SS G_CDS: -0.74 Total: -3.78 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: -5.07 Total: -6.61 kcal Total LS contribution 4.53 Total: 4.53 kcal Total: -8.27 -7.54 -15.80 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13287814.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.693 kcal (2) G-P(sol) polarization free energy of solvation -8.268 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.962 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.537 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.805 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.498 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds