Wall clock time and date at job start Mon Mar 8 2021 04:10:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42903 * 113.99688 * 2 1 4 4 H 1.09001 * 112.84977 * 341.20141 * 3 2 1 5 5 C 1.53787 * 113.68942 * 112.46736 * 3 2 1 6 6 C 1.53787 * 87.08055 * 139.99136 * 5 3 2 7 7 H 1.09005 * 113.68479 * 89.12683 * 6 5 3 8 8 N 1.46496 * 113.61222 * 220.01649 * 6 5 3 9 9 C 1.34773 * 119.99973 * 252.49566 * 8 6 5 10 10 O 1.21610 * 120.00228 * 359.73128 * 9 8 6 11 11 C 1.47386 * 119.99893 * 180.02562 * 9 8 6 12 12 C 1.36418 * 127.19164 * 179.43318 * 11 9 8 13 13 C 1.50697 * 125.80111 * 0.02562 * 12 11 9 14 14 O 1.33654 * 108.39266 * 179.87057 * 12 11 9 15 15 C 1.34216 * 110.90879 * 0.41284 * 14 12 11 16 16 C 1.50703 * 125.43385 * 179.76474 * 15 14 12 17 17 O 1.42902 * 109.46775 * 244.97803 * 16 15 14 18 18 Si 1.86300 * 109.47286 * 4.97891 * 16 15 14 19 19 C 1.34177 * 109.12497 * 359.74980 * 15 14 12 20 20 C 1.53782 * 113.61444 * 210.00261 * 3 2 1 21 21 H 1.09003 * 109.46551 * 179.97438 * 1 2 3 22 22 H 1.08997 * 109.46933 * 299.99406 * 1 2 3 23 23 H 1.08994 * 109.47554 * 59.99938 * 1 2 3 24 24 H 1.08997 * 113.61236 * 25.44140 * 5 3 2 25 25 H 1.09000 * 113.60991 * 254.53720 * 5 3 2 26 26 H 0.97004 * 120.00009 * 72.50415 * 8 6 5 27 27 H 1.09005 * 109.47099 * 89.99709 * 13 12 11 28 28 H 1.08999 * 109.47082 * 209.99776 * 13 12 11 29 29 H 1.08997 * 109.47159 * 329.99702 * 13 12 11 30 30 H 1.08995 * 109.46654 * 124.97938 * 16 15 14 31 31 H 0.96705 * 113.99596 * 180.02562 * 17 16 15 32 32 H 1.48497 * 109.99879 * 178.67944 * 18 16 15 33 33 H 1.48503 * 110.00003 * 299.99753 * 18 16 15 34 34 H 1.07998 * 127.02083 * 179.97438 * 19 15 14 35 35 H 1.08995 * 113.61293 * 105.38814 * 20 3 2 36 36 H 1.08998 * 113.69139 * 334.49590 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3136 2.0789 -0.3237 5 6 2.7531 1.6511 1.3014 6 6 3.8220 2.3200 0.4210 7 1 3.6220 3.3710 0.2118 8 7 5.1928 2.0821 0.8795 9 6 5.8937 3.0793 1.4547 10 8 5.3898 4.1780 1.5886 11 6 7.2730 2.8400 1.9154 12 6 8.1139 3.7393 2.5030 13 6 7.7928 5.1808 2.8029 14 8 9.2696 3.1237 2.7704 15 6 9.2331 1.8424 2.3725 16 6 10.3605 0.8520 2.5111 17 8 10.8179 0.4663 1.2134 18 14 11.7622 1.6348 3.4563 19 6 8.0325 1.5840 1.8321 20 6 3.3755 1.3720 -0.7046 21 1 -0.3632 -1.0277 -0.0005 22 1 -0.3633 0.5137 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 3.1169 0.7772 1.8417 25 1 2.2132 2.3504 1.9398 26 1 5.5962 1.2068 0.7690 27 1 7.3595 5.2567 3.8002 28 1 8.7064 5.7736 2.7575 29 1 7.0802 5.5548 2.0678 30 1 10.0070 -0.0281 3.0482 31 1 11.5446 -0.1716 1.2260 32 1 12.8674 0.6579 3.6274 33 1 12.2532 2.8360 2.7344 34 1 7.6935 0.6451 1.4197 35 1 3.3380 1.8460 -1.6854 36 1 3.9104 0.4224 -0.7135 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_13308374.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:10 Heat of formation + Delta-G solvation = -64.398100 kcal Electronic energy + Delta-G solvation = -20295.841490 eV Core-core repulsion = 16942.793543 eV Total energy + Delta-G solvation = -3353.047947 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 268.119 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -43.67639 -41.06725 -39.58651 -38.13567 -37.22446 -34.45405 -33.69058 -33.07480 -29.50415 -27.88469 -26.79576 -26.19467 -24.98986 -23.61567 -21.97818 -21.32511 -20.25740 -18.90051 -18.37584 -18.14344 -17.24846 -16.99457 -16.82161 -16.27686 -16.14106 -15.91889 -15.62702 -15.39822 -14.96951 -14.64026 -14.15620 -14.00804 -13.96813 -13.82494 -13.51791 -13.43442 -13.13360 -12.78506 -12.61387 -12.18367 -12.14991 -12.08964 -11.87324 -10.94852 -10.81908 -10.64726 -10.49035 -10.00398 -9.49391 -5.02165 0.35472 0.86184 1.10310 1.37462 1.68048 1.92061 2.15844 2.39564 2.90540 3.18826 3.41601 3.44083 3.52516 3.76682 3.78117 3.81974 3.87244 4.10549 4.20936 4.27784 4.43181 4.44469 4.47097 4.59906 4.66914 4.69724 4.70118 4.75640 4.84090 4.91198 4.95640 5.07140 5.16943 5.27301 5.54195 5.99869 6.21406 6.22836 6.55262 7.28259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.168 4.168 6 C 0.126 3.874 7 H 0.120 0.880 8 N -0.711 5.711 9 C 0.596 3.404 10 O -0.540 6.540 11 C -0.254 4.254 12 C 0.098 3.902 13 C -0.086 4.086 14 O -0.168 6.168 15 C -0.009 4.009 16 C -0.037 4.037 17 O -0.534 6.534 18 Si 0.698 3.302 19 C -0.146 4.146 20 C -0.144 4.144 21 H 0.087 0.913 22 H 0.043 0.957 23 H 0.043 0.957 24 H 0.094 0.906 25 H 0.076 0.924 26 H 0.403 0.597 27 H 0.094 0.906 28 H 0.081 0.919 29 H 0.111 0.889 30 H 0.098 0.902 31 H 0.388 0.612 32 H -0.252 1.252 33 H -0.251 1.251 34 H 0.158 0.842 35 H 0.082 0.918 36 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.303 -2.411 1.816 3.034 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.207 4.207 6 C 0.021 3.979 7 H 0.138 0.862 8 N -0.362 5.362 9 C 0.384 3.616 10 O -0.419 6.419 11 C -0.258 4.258 12 C 0.044 3.956 13 C -0.142 4.142 14 O -0.065 6.065 15 C -0.057 4.057 16 C -0.146 4.146 17 O -0.342 6.342 18 Si 0.597 3.403 19 C -0.165 4.165 20 C -0.183 4.183 21 H 0.105 0.895 22 H 0.062 0.938 23 H 0.062 0.938 24 H 0.113 0.887 25 H 0.095 0.905 26 H 0.238 0.762 27 H 0.112 0.888 28 H 0.100 0.900 29 H 0.129 0.871 30 H 0.115 0.885 31 H 0.238 0.762 32 H -0.176 1.176 33 H -0.175 1.175 34 H 0.175 0.825 35 H 0.101 0.899 36 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 0.080 -1.030 1.839 2.109 hybrid contribution 0.154 -1.322 -1.024 1.679 sum 0.234 -2.351 0.815 2.500 Atomic orbital electron populations 1.22828 0.80765 1.03044 1.00145 1.87940 1.19998 1.26896 1.94564 1.23458 0.93728 0.85764 0.96525 0.88922 1.24021 0.97454 1.01445 0.97777 1.22209 0.80351 1.00543 0.94824 0.86168 1.45671 1.14644 1.14216 1.61654 1.17183 0.83778 0.83990 0.76607 1.90766 1.70721 1.23603 1.56797 1.21093 0.96695 0.94925 1.13119 1.22902 0.82382 0.95461 0.94832 1.20704 1.03431 0.85174 1.04888 1.83651 1.35724 1.22198 1.64897 1.20943 0.96733 0.83003 1.04983 1.23809 1.01864 0.98079 0.90877 1.86568 1.55870 1.65968 1.25841 0.94435 0.77002 0.80830 0.88014 1.22532 0.93057 0.98387 1.02551 1.23630 0.95692 1.00428 0.98519 0.89486 0.93836 0.93814 0.88734 0.90513 0.76229 0.88804 0.90019 0.87083 0.88477 0.76241 1.17649 1.17489 0.82484 0.89938 0.88513 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.61 10.72 -35.23 -0.38 -0.99 16 3 C 0.06 -0.01 4.31 -25.91 -0.11 -0.12 16 4 H 0.09 -0.13 7.87 -51.93 -0.41 -0.54 16 5 C -0.17 -0.03 7.71 -25.91 -0.20 -0.23 16 6 C 0.13 0.04 4.24 -67.11 -0.28 -0.24 16 7 H 0.12 0.15 7.46 -51.93 -0.39 -0.24 16 8 N -0.71 -0.57 5.35 -54.10 -0.29 -0.86 16 9 C 0.60 2.00 7.81 -12.54 -0.10 1.90 16 10 O -0.54 -3.15 14.44 5.27 0.08 -3.07 16 11 C -0.25 -0.70 6.31 -103.27 -0.65 -1.35 16 12 C 0.10 0.24 7.37 -34.97 -0.26 -0.01 16 13 C -0.09 -0.04 9.89 36.00 0.36 0.32 16 14 O -0.17 -0.41 8.90 7.64 0.07 -0.34 16 15 C -0.01 -0.02 6.22 -35.74 -0.22 -0.24 16 16 C -0.04 0.03 2.96 36.01 0.11 0.13 16 17 O -0.53 -0.11 12.86 -35.23 -0.45 -0.56 16 18 Si 0.70 -0.68 32.09 -169.99 -5.46 -6.14 16 19 C -0.15 -0.21 10.48 -37.46 -0.39 -0.60 16 20 C -0.14 0.10 7.66 -25.92 -0.20 -0.10 16 21 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 22 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 23 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 24 H 0.09 0.06 8.14 -51.93 -0.42 -0.36 16 25 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 26 H 0.40 -0.46 7.90 -40.82 -0.32 -0.78 16 27 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.11 0.18 6.49 -51.93 -0.34 -0.16 16 30 H 0.10 -0.32 7.96 -51.93 -0.41 -0.73 16 31 H 0.39 -1.63 8.74 45.56 0.40 -1.23 16 32 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 33 H -0.25 -0.75 7.11 56.52 0.40 -0.35 16 34 H 0.16 -0.13 7.74 -52.49 -0.41 -0.54 16 35 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.10 -0.07 8.12 -51.93 -0.42 -0.49 16 LS Contribution 311.81 15.07 4.70 4.70 Total: 0.00 -7.78 311.81 -7.47 -15.25 By element: Atomic # 1 Polarization: -3.62 SS G_CDS: -4.88 Total: -8.50 kcal Atomic # 6 Polarization: 1.39 SS G_CDS: -0.86 Total: 0.53 kcal Atomic # 7 Polarization: -0.57 SS G_CDS: -0.29 Total: -0.86 kcal Atomic # 8 Polarization: -4.28 SS G_CDS: -0.69 Total: -4.97 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.46 Total: -6.14 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -7.78 -7.47 -15.25 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13308374.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.153 kcal (2) G-P(sol) polarization free energy of solvation -7.776 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.929 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.469 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.245 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.398 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds