Wall clock time and date at job start Mon Mar 8 2021 04:10:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42903 * 113.99688 * 2 1 4 4 H 1.09001 * 112.84977 * 341.20141 * 3 2 1 5 5 C 1.53787 * 113.68942 * 112.46736 * 3 2 1 6 6 C 1.53787 * 87.08055 * 139.99136 * 5 3 2 7 7 H 1.09005 * 113.68479 * 89.12683 * 6 5 3 8 8 N 1.46496 * 113.61222 * 220.01649 * 6 5 3 9 9 C 1.34773 * 119.99973 * 252.49566 * 8 6 5 10 10 O 1.21610 * 120.00228 * 359.73128 * 9 8 6 11 11 C 1.47386 * 119.99893 * 180.02562 * 9 8 6 12 12 C 1.36418 * 127.19164 * 179.43318 * 11 9 8 13 13 C 1.50697 * 125.80111 * 0.02562 * 12 11 9 14 14 O 1.33654 * 108.39266 * 179.87057 * 12 11 9 15 15 C 1.34216 * 110.90879 * 0.41284 * 14 12 11 16 16 C 1.50703 * 125.43385 * 179.76474 * 15 14 12 17 17 O 1.42902 * 109.46775 * 244.97803 * 16 15 14 18 18 Si 1.86300 * 109.47286 * 4.97891 * 16 15 14 19 19 C 1.34177 * 109.12497 * 359.74980 * 15 14 12 20 20 C 1.53782 * 113.61444 * 210.00261 * 3 2 1 21 21 H 1.09003 * 109.46551 * 179.97438 * 1 2 3 22 22 H 1.08997 * 109.46933 * 299.99406 * 1 2 3 23 23 H 1.08994 * 109.47554 * 59.99938 * 1 2 3 24 24 H 1.08997 * 113.61236 * 25.44140 * 5 3 2 25 25 H 1.09000 * 113.60991 * 254.53720 * 5 3 2 26 26 H 0.97004 * 120.00009 * 72.50415 * 8 6 5 27 27 H 1.09005 * 109.47099 * 89.99709 * 13 12 11 28 28 H 1.08999 * 109.47082 * 209.99776 * 13 12 11 29 29 H 1.08997 * 109.47159 * 329.99702 * 13 12 11 30 30 H 1.08995 * 109.46654 * 124.97938 * 16 15 14 31 31 H 0.96705 * 113.99596 * 180.02562 * 17 16 15 32 32 H 1.48497 * 109.99879 * 178.67944 * 18 16 15 33 33 H 1.48503 * 110.00003 * 299.99753 * 18 16 15 34 34 H 1.07998 * 127.02083 * 179.97438 * 19 15 14 35 35 H 1.08995 * 113.61293 * 105.38814 * 20 3 2 36 36 H 1.08998 * 113.69139 * 334.49590 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3136 2.0789 -0.3237 5 6 2.7531 1.6511 1.3014 6 6 3.8220 2.3200 0.4210 7 1 3.6220 3.3710 0.2118 8 7 5.1928 2.0821 0.8795 9 6 5.8937 3.0793 1.4547 10 8 5.3898 4.1780 1.5886 11 6 7.2730 2.8400 1.9154 12 6 8.1139 3.7393 2.5030 13 6 7.7928 5.1808 2.8029 14 8 9.2696 3.1237 2.7704 15 6 9.2331 1.8424 2.3725 16 6 10.3605 0.8520 2.5111 17 8 10.8179 0.4663 1.2134 18 14 11.7622 1.6348 3.4563 19 6 8.0325 1.5840 1.8321 20 6 3.3755 1.3720 -0.7046 21 1 -0.3632 -1.0277 -0.0005 22 1 -0.3633 0.5137 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 3.1169 0.7772 1.8417 25 1 2.2132 2.3504 1.9398 26 1 5.5962 1.2068 0.7690 27 1 7.3595 5.2567 3.8002 28 1 8.7064 5.7736 2.7575 29 1 7.0802 5.5548 2.0678 30 1 10.0070 -0.0281 3.0482 31 1 11.5446 -0.1716 1.2260 32 1 12.8674 0.6579 3.6274 33 1 12.2532 2.8360 2.7344 34 1 7.6935 0.6451 1.4197 35 1 3.3380 1.8460 -1.6854 36 1 3.9104 0.4224 -0.7135 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_13308374.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:09 Heat of formation + Delta-G solvation = -64.889357 kcal Electronic energy + Delta-G solvation = -20295.862793 eV Core-core repulsion = 16942.793543 eV Total energy + Delta-G solvation = -3353.069250 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 268.119 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -43.78462 -41.16134 -39.72083 -38.08250 -37.28210 -34.61397 -33.78064 -33.14165 -29.52207 -27.83919 -26.79225 -26.25271 -25.01985 -23.70235 -22.07335 -21.41591 -20.33402 -18.85853 -18.46646 -18.17393 -17.35333 -17.07227 -16.86085 -16.34312 -16.15917 -15.91094 -15.70454 -15.51375 -15.00381 -14.73740 -14.20061 -14.09883 -13.99013 -13.85027 -13.51490 -13.44855 -13.14706 -12.76320 -12.66613 -12.21041 -12.14952 -12.13819 -11.86650 -11.13247 -10.96013 -10.62830 -10.48854 -10.12464 -9.58872 -4.95077 0.19921 0.78556 1.15862 1.35801 1.67647 1.93727 2.07444 2.20397 2.93196 3.20816 3.41399 3.51845 3.52965 3.70635 3.72566 3.80525 3.87930 4.11451 4.27553 4.30094 4.45021 4.51295 4.54782 4.59622 4.64610 4.69743 4.70703 4.78269 4.84982 4.93274 4.94579 5.02732 5.13435 5.20558 5.46474 5.89333 6.24799 6.45242 6.51519 7.11501 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.397 6.397 3 C 0.063 3.937 4 H 0.105 0.895 5 C -0.165 4.165 6 C 0.123 3.877 7 H 0.110 0.890 8 N -0.700 5.700 9 C 0.591 3.409 10 O -0.572 6.572 11 C -0.270 4.270 12 C 0.086 3.914 13 C -0.084 4.084 14 O -0.176 6.176 15 C -0.023 4.023 16 C -0.038 4.038 17 O -0.554 6.554 18 Si 0.764 3.236 19 C -0.147 4.147 20 C -0.136 4.136 21 H 0.092 0.908 22 H 0.047 0.953 23 H 0.052 0.948 24 H 0.090 0.910 25 H 0.073 0.927 26 H 0.413 0.587 27 H 0.105 0.895 28 H 0.095 0.905 29 H 0.097 0.903 30 H 0.132 0.868 31 H 0.406 0.594 32 H -0.262 1.262 33 H -0.312 1.312 34 H 0.179 0.821 35 H 0.090 0.910 36 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.421 -3.595 1.862 4.070 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.316 6.316 3 C 0.004 3.996 4 H 0.123 0.877 5 C -0.204 4.204 6 C 0.018 3.982 7 H 0.128 0.872 8 N -0.351 5.351 9 C 0.381 3.619 10 O -0.454 6.454 11 C -0.275 4.275 12 C 0.032 3.968 13 C -0.140 4.140 14 O -0.073 6.073 15 C -0.071 4.071 16 C -0.147 4.147 17 O -0.366 6.366 18 Si 0.668 3.332 19 C -0.166 4.166 20 C -0.174 4.174 21 H 0.111 0.889 22 H 0.066 0.934 23 H 0.071 0.929 24 H 0.109 0.891 25 H 0.092 0.908 26 H 0.250 0.750 27 H 0.123 0.877 28 H 0.114 0.886 29 H 0.116 0.884 30 H 0.149 0.851 31 H 0.259 0.741 32 H -0.187 1.187 33 H -0.240 1.240 34 H 0.196 0.804 35 H 0.109 0.891 36 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -0.043 -2.273 1.891 2.957 hybrid contribution 0.219 -0.938 -1.072 1.441 sum 0.177 -3.212 0.819 3.319 Atomic orbital electron populations 1.22961 0.79794 1.03714 1.00823 1.87904 1.21219 1.27764 1.94665 1.23547 0.94148 0.85632 0.96230 0.87712 1.23977 0.97401 1.01095 0.97942 1.22213 0.80088 1.00302 0.95590 0.87221 1.45620 1.14660 1.14193 1.60613 1.17352 0.84106 0.83930 0.76530 1.90743 1.71449 1.24873 1.58312 1.21220 0.96637 0.95891 1.13724 1.23272 0.82465 0.96221 0.94817 1.20723 1.03803 0.84464 1.04992 1.83658 1.35718 1.22813 1.65100 1.21498 0.97697 0.82972 1.04895 1.23997 1.01153 0.98795 0.90753 1.86518 1.56913 1.66813 1.26395 0.93660 0.75950 0.76823 0.86806 1.22789 0.92756 0.98657 1.02363 1.23580 0.95210 1.00171 0.98424 0.88909 0.93381 0.92916 0.89134 0.90839 0.75030 0.87707 0.88607 0.88421 0.85091 0.74139 1.18722 1.23962 0.80402 0.89097 0.88211 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.40 -1.17 10.72 -148.98 -1.60 -2.77 16 3 C 0.06 -0.03 4.31 31.12 0.13 0.11 16 4 H 0.11 -0.33 7.87 -2.39 -0.02 -0.35 16 5 C -0.17 -0.11 7.71 31.12 0.24 0.13 16 6 C 0.12 0.13 4.24 45.52 0.19 0.32 16 7 H 0.11 0.39 7.46 -2.38 -0.02 0.37 16 8 N -0.70 -1.38 5.35 -443.33 -2.37 -3.75 16 9 C 0.59 4.54 7.81 86.65 0.68 5.22 16 10 O -0.57 -7.59 14.44 -4.06 -0.06 -7.65 16 11 C -0.27 -1.69 6.31 -18.99 -0.12 -1.81 16 12 C 0.09 0.51 7.37 25.26 0.19 0.70 16 13 C -0.08 -0.16 9.89 71.24 0.70 0.54 16 14 O -0.18 -0.97 8.90 4.44 0.04 -0.93 16 15 C -0.02 -0.07 6.22 24.76 0.15 0.08 16 16 C -0.04 0.09 2.96 71.24 0.21 0.30 16 17 O -0.55 0.29 12.86 -148.98 -1.92 -1.63 16 18 Si 0.76 -1.50 32.09 68.60 2.20 0.70 16 19 C -0.15 -0.38 10.48 23.65 0.25 -0.13 16 20 C -0.14 0.24 7.66 31.12 0.24 0.47 16 21 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 22 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 23 H 0.05 -0.20 8.14 -2.39 -0.02 -0.22 16 24 H 0.09 0.14 8.14 -2.39 -0.02 0.12 16 25 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 26 H 0.41 -1.03 7.90 -92.71 -0.73 -1.76 16 27 H 0.10 -0.07 8.14 -2.38 -0.02 -0.09 16 28 H 0.10 -0.14 8.14 -2.39 -0.02 -0.16 16 29 H 0.10 0.49 6.49 -2.39 -0.02 0.47 16 30 H 0.13 -1.18 7.96 -2.39 -0.02 -1.20 16 31 H 0.41 -3.89 8.74 -74.05 -0.65 -4.54 16 32 H -0.26 0.11 7.11 99.48 0.71 0.82 16 33 H -0.31 -2.57 7.11 99.48 0.71 -1.86 16 34 H 0.18 -0.50 7.74 -2.91 -0.02 -0.53 16 35 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 36 H 0.10 -0.21 8.12 -2.39 -0.02 -0.23 16 Total: 0.00 -18.93 311.81 0.16 -18.77 By element: Atomic # 1 Polarization: -9.65 SS G_CDS: -0.23 Total: -9.88 kcal Atomic # 6 Polarization: 3.04 SS G_CDS: 4.10 Total: 7.14 kcal Atomic # 7 Polarization: -1.38 SS G_CDS: -2.37 Total: -3.75 kcal Atomic # 8 Polarization: -9.45 SS G_CDS: -3.53 Total: -12.98 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: 2.20 Total: 0.70 kcal Total: -18.93 0.16 -18.77 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13308374.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.118 kcal (2) G-P(sol) polarization free energy of solvation -18.932 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.049 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.160 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.772 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.889 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds