Wall clock time and date at job start Mon Mar 8 2021 04:10:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42905 * 113.99855 * 2 1 4 4 H 1.08996 * 112.85158 * 18.80335 * 3 2 1 5 5 C 1.53783 * 113.61236 * 150.00218 * 3 2 1 6 6 C 1.53777 * 87.08020 * 140.06513 * 5 3 2 7 7 H 1.09004 * 113.61396 * 89.20270 * 6 5 3 8 8 N 1.46500 * 113.61299 * 220.01658 * 6 5 3 9 9 C 1.34781 * 120.00241 * 205.00017 * 8 6 5 10 10 O 1.21585 * 119.99693 * 0.02562 * 9 8 6 11 11 C 1.47532 * 120.00113 * 179.97438 * 9 8 6 12 12 C 1.40133 * 120.19361 * 179.97438 * 11 9 8 13 13 O 1.35661 * 120.14762 * 0.02562 * 12 11 9 14 14 C 1.38709 * 119.70514 * 179.77712 * 12 11 9 15 15 C 1.38053 * 120.08251 * 0.50571 * 14 12 11 16 16 C 1.50699 * 119.80778 * 179.76822 * 15 14 12 17 17 O 1.42892 * 109.47249 * 299.72925 * 16 15 14 18 18 Si 1.86298 * 109.47032 * 179.72310 * 16 15 14 19 19 C 1.38559 * 120.38672 * 359.49465 * 15 14 12 20 20 C 1.37785 * 120.29812 * 0.25142 * 19 15 14 21 21 C 1.53782 * 87.08404 * 334.56412 * 6 5 3 22 22 H 1.08995 * 109.46641 * 179.97438 * 1 2 3 23 23 H 1.08997 * 109.47080 * 300.00088 * 1 2 3 24 24 H 1.08998 * 109.46757 * 60.00122 * 1 2 3 25 25 H 1.09000 * 113.61498 * 25.50958 * 5 3 2 26 26 H 1.08998 * 113.61137 * 254.61483 * 5 3 2 27 27 H 0.97002 * 120.00144 * 24.99846 * 8 6 5 28 28 H 0.96698 * 114.00116 * 89.99487 * 13 12 11 29 29 H 1.07995 * 119.96003 * 180.26195 * 14 12 11 30 30 H 1.09004 * 109.46453 * 59.72993 * 16 15 14 31 31 H 0.96703 * 114.00176 * 299.99748 * 17 16 15 32 32 H 1.48506 * 109.99834 * 58.68765 * 18 16 15 33 33 H 1.48502 * 110.00011 * 180.02562 * 18 16 15 34 34 H 1.07998 * 119.84884 * 180.27674 * 19 15 14 35 35 H 1.08002 * 120.04069 * 180.02562 * 20 19 15 36 36 H 1.08992 * 113.61494 * 139.97950 * 21 6 5 37 37 H 1.08998 * 113.61468 * 270.88472 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0789 0.3237 5 6 3.3756 1.3719 0.7045 6 6 3.8220 2.3199 -0.4210 7 1 3.6222 3.3709 -0.2116 8 7 5.1929 2.0819 -0.8795 9 6 5.8938 3.0791 -1.4547 10 8 5.3885 4.1764 -1.5927 11 6 7.2746 2.8396 -1.9160 12 6 8.0068 3.8733 -2.5150 13 8 7.4495 5.1000 -2.6734 14 6 9.3059 3.6382 -2.9408 15 6 9.8699 2.3880 -2.7838 16 6 11.2799 2.1379 -3.2533 17 8 11.3633 2.3777 -4.6595 18 14 11.7494 0.3709 -2.8956 19 6 9.1492 1.3632 -2.1920 20 6 7.8594 1.5807 -1.7587 21 6 2.7532 1.6511 -1.3014 22 1 -0.3632 -1.0276 -0.0005 23 1 -0.3633 0.5138 0.8899 24 1 -0.3633 0.5138 -0.8900 25 1 3.9095 0.4216 0.7125 26 1 3.3382 1.8458 1.6854 27 1 5.5962 1.2067 -0.7691 28 1 7.5948 5.6973 -1.9269 29 1 9.8754 4.4331 -3.3991 30 1 11.9614 2.8081 -2.7294 31 1 10.7821 1.8152 -5.1896 32 1 10.8083 -0.5529 -3.5785 33 1 13.1381 0.1117 -3.3534 34 1 9.6005 0.3897 -2.0696 35 1 7.3016 0.7790 -1.2976 36 1 2.2133 2.3503 -1.9398 37 1 3.1169 0.7772 -1.8418 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_13422076.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:16 Heat of formation + Delta-G solvation = -90.779794 kcal Electronic energy + Delta-G solvation = -21545.390611 eV Core-core repulsion = 18062.972527 eV Total energy + Delta-G solvation = -3482.418084 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.72610 -40.73528 -39.46429 -38.44644 -37.25348 -37.17272 -34.35419 -32.52847 -31.13539 -28.08149 -27.50506 -26.82201 -25.11620 -23.96087 -23.19589 -21.56398 -21.16974 -19.40392 -18.65663 -18.37014 -18.17046 -17.12556 -16.72273 -16.60098 -16.37863 -16.23849 -16.05933 -15.82743 -15.51130 -15.22336 -14.93463 -14.88047 -14.28065 -13.75536 -13.58576 -13.55000 -13.28883 -12.91039 -12.82685 -12.42150 -12.22802 -12.18867 -12.11513 -11.90631 -11.63962 -10.87636 -10.66479 -10.52172 -10.18066 -10.02681 -9.80731 -5.06424 -0.42916 0.08548 1.14733 1.50140 1.74256 1.87737 2.00988 2.54975 2.85442 3.08771 3.25364 3.34310 3.43704 3.48363 3.60406 3.69394 3.77130 3.81023 3.97016 4.18970 4.23415 4.35113 4.40692 4.42234 4.55020 4.63311 4.64994 4.67163 4.72928 4.86180 4.91561 4.94466 4.98846 5.12015 5.17343 5.45661 5.51353 6.18012 6.28121 6.44275 6.69692 7.20406 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.144 4.144 6 C 0.126 3.874 7 H 0.120 0.880 8 N -0.716 5.716 9 C 0.560 3.440 10 O -0.518 6.518 11 C -0.165 4.165 12 C 0.173 3.827 13 O -0.476 6.476 14 C -0.129 4.129 15 C -0.075 4.075 16 C -0.081 4.081 17 O -0.526 6.526 18 Si 0.688 3.312 19 C -0.135 4.135 20 C -0.065 4.065 21 C -0.169 4.169 22 H 0.087 0.913 23 H 0.044 0.956 24 H 0.043 0.957 25 H 0.097 0.903 26 H 0.083 0.917 27 H 0.401 0.599 28 H 0.398 0.602 29 H 0.141 0.859 30 H 0.123 0.877 31 H 0.378 0.622 32 H -0.258 1.258 33 H -0.255 1.255 34 H 0.136 0.864 35 H 0.134 0.866 36 H 0.076 0.924 37 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.142 -3.277 4.529 5.592 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.182 4.182 6 C 0.021 3.979 7 H 0.138 0.862 8 N -0.368 5.368 9 C 0.348 3.652 10 O -0.394 6.394 11 C -0.169 4.169 12 C 0.126 3.874 13 O -0.288 6.288 14 C -0.148 4.148 15 C -0.075 4.075 16 C -0.190 4.190 17 O -0.333 6.333 18 Si 0.589 3.411 19 C -0.153 4.153 20 C -0.083 4.083 21 C -0.208 4.208 22 H 0.105 0.895 23 H 0.062 0.938 24 H 0.062 0.938 25 H 0.115 0.885 26 H 0.101 0.899 27 H 0.237 0.763 28 H 0.257 0.743 29 H 0.159 0.841 30 H 0.141 0.859 31 H 0.226 0.774 32 H -0.183 1.183 33 H -0.180 1.180 34 H 0.154 0.846 35 H 0.152 0.848 36 H 0.095 0.905 37 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 0.372 -3.172 3.759 4.932 hybrid contribution -0.454 0.155 -0.658 0.814 sum -0.082 -3.017 3.101 4.327 Atomic orbital electron populations 1.22831 0.80722 1.03068 1.00167 1.87937 1.20033 1.26859 1.94563 1.23455 0.93755 0.85805 0.96473 0.88915 1.23628 0.95708 1.00365 0.98487 1.22208 0.80306 1.00570 0.94841 0.86190 1.45825 1.14840 1.14202 1.61947 1.18080 0.85144 0.84466 0.77553 1.90830 1.70467 1.23533 1.54563 1.20422 0.95515 0.95702 1.05214 1.18511 0.89683 0.86062 0.93098 1.84768 1.77065 1.21271 1.45648 1.21352 0.93990 0.97998 1.01455 1.20404 0.96621 0.93373 0.97133 1.25156 0.95244 1.14370 0.84250 1.86625 1.67274 1.63655 1.15729 0.95004 0.80308 0.73671 0.92127 1.20949 0.94659 0.98960 1.00724 1.21151 0.94823 0.95281 0.97073 1.24025 0.97501 1.01449 0.97831 0.89460 0.93780 0.93844 0.88475 0.89875 0.76341 0.74345 0.84149 0.85894 0.77421 1.18273 1.18001 0.84625 0.84796 0.90522 0.88740 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.45 10.72 -35.23 -0.38 -0.83 16 3 C 0.06 -0.04 4.31 -25.91 -0.11 -0.15 16 4 H 0.09 -0.16 7.87 -51.93 -0.41 -0.57 16 5 C -0.14 0.23 7.66 -25.92 -0.20 0.03 16 6 C 0.13 -0.05 4.24 -67.12 -0.28 -0.33 16 7 H 0.12 0.09 7.46 -51.93 -0.39 -0.30 16 8 N -0.72 0.33 5.31 -54.06 -0.29 0.04 16 9 C 0.56 1.36 7.76 -12.47 -0.10 1.26 16 10 O -0.52 -3.12 14.76 -16.59 -0.24 -3.36 16 11 C -0.16 -0.17 5.89 -104.85 -0.62 -0.79 16 12 C 0.17 0.31 6.72 -38.70 -0.26 0.05 16 13 O -0.48 -1.33 11.58 -40.56 -0.47 -1.80 16 14 C -0.13 -0.07 9.53 -39.48 -0.38 -0.44 16 15 C -0.07 0.06 5.39 -104.57 -0.56 -0.50 16 16 C -0.08 0.11 2.81 36.01 0.10 0.21 16 17 O -0.53 -0.29 12.77 -35.23 -0.45 -0.74 16 18 Si 0.69 -1.50 29.77 -169.99 -5.06 -6.56 16 19 C -0.14 0.27 8.65 -39.63 -0.34 -0.08 16 20 C -0.06 0.11 9.53 -39.20 -0.37 -0.27 16 21 C -0.17 0.02 7.71 -25.92 -0.20 -0.18 16 22 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 23 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 24 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 25 H 0.10 -0.19 8.12 -51.93 -0.42 -0.61 16 26 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 27 H 0.40 -1.23 6.76 -40.82 -0.28 -1.50 16 28 H 0.40 -0.42 9.06 45.56 0.41 -0.01 16 29 H 0.14 0.04 8.06 -52.49 -0.42 -0.38 16 30 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 31 H 0.38 -0.81 8.70 45.56 0.40 -0.42 16 32 H -0.26 0.08 7.11 56.52 0.40 0.48 16 33 H -0.26 -0.36 7.11 56.52 0.40 0.05 16 34 H 0.14 -0.55 4.85 -52.49 -0.25 -0.80 16 35 H 0.13 -0.62 6.40 -52.49 -0.34 -0.95 16 36 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 37 H 0.09 0.03 8.14 -51.93 -0.42 -0.40 16 LS Contribution 314.25 15.07 4.74 4.74 Total: 0.00 -9.05 314.25 -8.23 -17.28 By element: Atomic # 1 Polarization: -4.81 SS G_CDS: -3.85 Total: -8.66 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: -2.23 Total: -0.11 kcal Atomic # 7 Polarization: 0.33 SS G_CDS: -0.29 Total: 0.04 kcal Atomic # 8 Polarization: -5.18 SS G_CDS: -1.54 Total: -6.72 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.06 Total: -6.56 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -9.05 -8.23 -17.28 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13422076.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.503 kcal (2) G-P(sol) polarization free energy of solvation -9.052 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.554 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.226 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.277 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.780 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds