Wall clock time and date at job start Mon Mar 8 2021 04:10:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42894 * 114.00051 * 2 1 4 4 H 1.09001 * 112.85127 * 18.80464 * 3 2 1 5 5 C 1.53780 * 113.61519 * 149.99849 * 3 2 1 6 6 C 1.53784 * 87.08277 * 139.98160 * 5 3 2 7 7 H 1.08998 * 113.61395 * 89.19569 * 6 5 3 8 8 N 1.46502 * 113.61500 * 220.02358 * 6 5 3 9 9 C 1.34781 * 119.99684 * 204.99846 * 8 6 5 10 10 O 1.21585 * 120.00020 * 0.02562 * 9 8 6 11 11 C 1.47529 * 119.99806 * 179.97438 * 9 8 6 12 12 C 1.40145 * 120.19350 * 180.27420 * 11 9 8 13 13 O 1.35647 * 120.14590 * 0.02562 * 12 11 9 14 14 C 1.38707 * 119.69978 * 180.25085 * 12 11 9 15 15 C 1.50702 * 119.95715 * 179.75471 * 14 12 11 16 16 O 1.42892 * 109.47242 * 74.72118 * 15 14 12 17 17 Si 1.86298 * 109.46915 * 194.72656 * 15 14 12 18 18 C 1.38060 * 120.08555 * 359.47417 * 14 12 11 19 19 C 1.38545 * 120.38685 * 0.27660 * 18 14 12 20 20 C 1.50706 * 119.84765 * 180.02562 * 19 18 14 21 21 C 1.37786 * 120.30566 * 359.97438 * 19 18 14 22 22 C 1.53783 * 113.61330 * 247.49646 * 3 2 1 23 23 H 1.08999 * 109.46811 * 60.00064 * 1 2 3 24 24 H 1.09005 * 109.46875 * 179.97438 * 1 2 3 25 25 H 1.08995 * 109.46899 * 299.99928 * 1 2 3 26 26 H 1.09002 * 113.61724 * 25.43668 * 5 3 2 27 27 H 1.09002 * 113.61689 * 254.52930 * 5 3 2 28 28 H 0.97000 * 120.00118 * 24.99390 * 8 6 5 29 29 H 0.96693 * 114.00893 * 270.22938 * 13 12 11 30 30 H 1.09000 * 109.46724 * 314.72163 * 15 14 12 31 31 H 0.96703 * 114.00176 * 180.02562 * 16 15 14 32 32 H 1.48506 * 109.99834 * 178.68053 * 17 15 14 33 33 H 1.48502 * 110.00011 * 299.99318 * 17 15 14 34 34 H 1.07997 * 119.80178 * 180.25305 * 18 14 12 35 35 H 1.08997 * 109.47479 * 89.99740 * 20 19 18 36 36 H 1.09004 * 109.47045 * 210.00488 * 20 19 18 37 37 H 1.09002 * 109.47018 * 329.99774 * 20 19 18 38 38 H 1.08004 * 120.04609 * 180.02562 * 21 19 18 39 39 H 1.08999 * 113.61735 * 105.47199 * 22 3 2 40 40 H 1.08998 * 113.61760 * 334.56355 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3138 2.0788 0.3238 5 6 3.3755 1.3718 0.7045 6 6 3.8228 2.3181 -0.4222 7 1 3.6235 3.3694 -0.2143 8 7 5.1935 2.0785 -0.8803 9 6 5.8951 3.0745 -1.4568 10 8 5.3906 4.1719 -1.5962 11 6 7.2757 2.8334 -1.9177 12 6 8.0110 3.8676 -2.5124 13 8 7.4566 5.0960 -2.6668 14 6 9.3063 3.6282 -2.9468 15 6 10.1003 4.7347 -3.5921 16 8 10.5321 5.6578 -2.5905 17 14 11.5861 4.0122 -4.4529 18 6 9.8713 2.3791 -2.7834 19 6 9.1495 1.3555 -2.1911 20 6 9.7784 -0.0031 -2.0183 21 6 7.8598 1.5742 -1.7585 22 6 2.7535 1.6488 -1.3018 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 3.9089 0.4213 0.7138 27 1 3.3384 1.8471 1.6848 28 1 5.5962 1.2031 -0.7687 29 1 6.9861 5.2130 -3.5034 30 1 9.4757 5.2534 -4.3194 31 1 11.0499 6.3983 -2.9351 32 1 12.3602 5.0896 -5.1203 33 1 12.4458 3.3021 -3.4722 34 1 10.8817 2.1989 -3.1195 35 1 10.2863 -0.0485 -1.0549 36 1 9.0043 -0.7695 -2.0576 37 1 10.4996 -0.1740 -2.8176 38 1 7.3011 0.7734 -1.2970 39 1 2.2142 2.3476 -1.9412 40 1 3.1167 0.7739 -1.8410 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_13422088.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:19 Heat of formation + Delta-G solvation = -93.400267 kcal Electronic energy + Delta-G solvation = -23677.438682 eV Core-core repulsion = 20039.369346 eV Total energy + Delta-G solvation = -3638.069335 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.73579 -40.75353 -39.39617 -37.99711 -37.67709 -37.13989 -34.35412 -33.17607 -32.48998 -27.91824 -27.62775 -26.81212 -26.77786 -25.91267 -23.94288 -21.86227 -21.41624 -20.95408 -19.45436 -18.53300 -18.26470 -18.18079 -17.38261 -16.76016 -16.65697 -16.23612 -16.14971 -15.82755 -15.60955 -15.41935 -14.98953 -14.86607 -14.61595 -14.54898 -14.07126 -13.77235 -13.53994 -13.48093 -13.18981 -13.00629 -12.79780 -12.73644 -12.39979 -12.20015 -12.15329 -11.90044 -11.80696 -11.61472 -10.73703 -10.50753 -10.43271 -10.15270 -9.95740 -9.48979 -5.04208 -0.29375 0.09091 1.19511 1.51718 1.79017 1.88157 2.06412 2.59390 2.87719 3.16940 3.30680 3.39264 3.50918 3.60701 3.61406 3.76929 3.78725 3.82808 4.04662 4.11002 4.22487 4.30832 4.37302 4.42993 4.44802 4.57979 4.61981 4.66586 4.67220 4.73552 4.74579 4.88856 4.93406 4.96079 4.99608 5.04042 5.21887 5.35049 5.49849 5.61253 6.19869 6.46020 6.49725 6.79092 7.26257 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.145 4.145 6 C 0.126 3.874 7 H 0.120 0.880 8 N -0.716 5.716 9 C 0.562 3.438 10 O -0.518 6.518 11 C -0.166 4.166 12 C 0.191 3.809 13 O -0.468 6.468 14 C -0.106 4.106 15 C -0.067 4.067 16 O -0.527 6.527 17 Si 0.685 3.315 18 C -0.075 4.075 19 C -0.097 4.097 20 C -0.117 4.117 21 C -0.066 4.066 22 C -0.168 4.168 23 H 0.043 0.957 24 H 0.087 0.913 25 H 0.043 0.957 26 H 0.097 0.903 27 H 0.082 0.918 28 H 0.400 0.600 29 H 0.393 0.607 30 H 0.074 0.926 31 H 0.379 0.621 32 H -0.259 1.259 33 H -0.253 1.253 34 H 0.136 0.864 35 H 0.074 0.926 36 H 0.072 0.928 37 H 0.072 0.928 38 H 0.132 0.868 39 H 0.076 0.924 40 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.345 -4.665 -2.955 5.533 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.183 4.183 6 C 0.021 3.979 7 H 0.138 0.862 8 N -0.368 5.368 9 C 0.350 3.650 10 O -0.394 6.394 11 C -0.169 4.169 12 C 0.144 3.856 13 O -0.278 6.278 14 C -0.107 4.107 15 C -0.176 4.176 16 O -0.334 6.334 17 Si 0.586 3.414 18 C -0.093 4.093 19 C -0.097 4.097 20 C -0.173 4.173 21 C -0.085 4.085 22 C -0.207 4.207 23 H 0.062 0.938 24 H 0.105 0.895 25 H 0.062 0.938 26 H 0.115 0.885 27 H 0.101 0.899 28 H 0.236 0.764 29 H 0.251 0.749 30 H 0.092 0.908 31 H 0.227 0.773 32 H -0.184 1.184 33 H -0.178 1.178 34 H 0.154 0.846 35 H 0.093 0.907 36 H 0.091 0.909 37 H 0.091 0.909 38 H 0.149 0.851 39 H 0.095 0.905 40 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 0.171 -4.336 -2.178 4.855 hybrid contribution -0.094 0.877 0.129 0.891 sum 0.077 -3.459 -2.049 4.021 Atomic orbital electron populations 1.22830 0.80747 1.03052 1.00155 1.87936 1.20011 1.26882 1.94566 1.23453 0.93739 0.85785 0.96494 0.88917 1.23635 0.95701 1.00391 0.98556 1.22206 0.80328 1.00579 0.94824 0.86210 1.45817 1.14795 1.14216 1.62017 1.18048 0.84987 0.84301 0.77709 1.90824 1.70537 1.23221 1.54843 1.20349 0.95052 0.94633 1.06913 1.18217 0.90205 0.83793 0.93381 1.84801 1.72528 1.27263 1.43248 1.19605 0.94491 0.94283 1.02341 1.24640 1.05592 0.92898 0.94501 1.86651 1.73937 1.38542 1.34311 0.95216 0.77854 0.84724 0.83584 1.21120 0.99611 0.91781 0.96786 1.19773 0.94041 0.96619 0.99299 1.20837 1.01160 0.92322 1.03000 1.21130 0.94802 0.95236 0.97348 1.24020 0.97453 1.01420 0.97790 0.93846 0.89468 0.93801 0.88500 0.89910 0.76375 0.74890 0.90760 0.77314 1.18408 1.17823 0.84639 0.90701 0.90946 0.90885 0.85062 0.90541 0.88716 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.51 10.71 -35.23 -0.38 -0.89 16 3 C 0.06 -0.02 4.31 -25.92 -0.11 -0.13 16 4 H 0.09 -0.13 7.87 -51.93 -0.41 -0.54 16 5 C -0.14 0.13 7.66 -25.92 -0.20 -0.06 16 6 C 0.13 0.03 4.24 -67.11 -0.28 -0.26 16 7 H 0.12 0.19 7.46 -51.93 -0.39 -0.20 16 8 N -0.72 -0.24 5.31 -54.05 -0.29 -0.53 16 9 C 0.56 1.87 7.76 -12.47 -0.10 1.78 16 10 O -0.52 -3.52 14.76 -16.59 -0.24 -3.76 16 11 C -0.17 -0.38 5.89 -104.84 -0.62 -0.99 16 12 C 0.19 0.60 6.69 -38.69 -0.26 0.34 16 13 O -0.47 -1.83 10.91 -40.52 -0.44 -2.28 16 14 C -0.11 -0.19 5.30 -104.51 -0.55 -0.74 16 15 C -0.07 -0.04 2.36 36.01 0.09 0.05 16 16 O -0.53 -1.37 12.86 -35.23 -0.45 -1.83 16 17 Si 0.69 -0.78 30.19 -169.99 -5.13 -5.92 16 18 C -0.08 -0.03 8.30 -39.53 -0.33 -0.35 16 19 C -0.10 0.05 5.87 -104.67 -0.61 -0.56 16 20 C -0.12 0.32 10.00 36.01 0.36 0.68 16 21 C -0.07 0.02 9.18 -39.20 -0.36 -0.34 16 22 C -0.17 0.02 7.71 -25.91 -0.20 -0.18 16 23 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 25 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.10 -0.12 8.12 -51.93 -0.42 -0.54 16 27 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 28 H 0.40 -0.87 6.76 -40.82 -0.28 -1.14 16 29 H 0.39 -0.04 9.06 45.56 0.41 0.38 16 30 H 0.07 -0.08 7.84 -51.93 -0.41 -0.49 16 31 H 0.38 -0.59 8.74 45.56 0.40 -0.19 16 32 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 33 H -0.25 -0.37 6.74 56.52 0.38 0.02 16 34 H 0.14 -0.15 4.87 -52.49 -0.26 -0.41 16 35 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.07 -0.28 8.08 -51.93 -0.42 -0.70 16 37 H 0.07 -0.26 8.08 -51.93 -0.42 -0.68 16 38 H 0.13 -0.41 6.40 -52.48 -0.34 -0.75 16 39 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 40 H 0.09 0.01 8.14 -51.93 -0.42 -0.41 16 LS Contribution 335.00 15.07 5.05 5.05 Total: 0.00 -9.81 335.00 -8.67 -18.47 By element: Atomic # 1 Polarization: -3.93 SS G_CDS: -4.70 Total: -8.63 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -2.08 Total: 0.30 kcal Atomic # 7 Polarization: -0.24 SS G_CDS: -0.29 Total: -0.53 kcal Atomic # 8 Polarization: -7.24 SS G_CDS: -1.52 Total: -8.75 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.13 Total: -5.92 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -9.81 -8.67 -18.47 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13422088.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.926 kcal (2) G-P(sol) polarization free energy of solvation -9.806 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.732 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.668 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.475 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.400 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds