Wall clock time and date at job start Mon Mar 8 2021 04:10:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42893 * 113.99805 * 2 1 4 4 H 1.08996 * 112.85056 * 341.19281 * 3 2 1 5 5 C 1.53777 * 113.61650 * 112.50776 * 3 2 1 6 6 C 1.53777 * 87.08388 * 139.97942 * 5 3 2 7 7 H 1.08998 * 113.69599 * 89.12638 * 6 5 3 8 8 N 1.46502 * 113.61165 * 220.01745 * 6 5 3 9 9 C 1.34775 * 120.00356 * 252.49370 * 8 6 5 10 10 O 1.21594 * 119.99464 * 0.02562 * 9 8 6 11 11 C 1.47520 * 120.00129 * 179.97438 * 9 8 6 12 12 C 1.39785 * 120.06381 * 180.02562 * 11 9 8 13 13 C 1.37634 * 119.92582 * 179.70489 * 12 11 9 14 14 C 1.50693 * 119.96398 * 180.29901 * 13 12 11 15 15 O 1.42901 * 109.47558 * 105.25445 * 14 13 12 16 16 Si 1.86297 * 109.47385 * 345.25215 * 14 13 12 17 17 C 1.39206 * 120.06756 * 0.54888 * 13 12 11 18 18 N 1.39043 * 119.92937 * 179.72322 * 17 13 12 19 19 C 1.46901 * 110.99815 * 239.73104 * 18 17 13 20 20 C 1.46898 * 110.99710 * 115.77485 * 18 17 13 21 21 C 1.39242 * 120.13623 * 359.45391 * 17 13 12 22 22 C 1.37590 * 120.06803 * 0.26824 * 21 17 13 23 23 C 1.53780 * 87.08045 * 334.56462 * 6 5 3 24 24 H 1.09000 * 109.47056 * 300.00144 * 1 2 3 25 25 H 1.08993 * 109.47585 * 60.00283 * 1 2 3 26 26 H 1.09000 * 109.47267 * 180.02562 * 1 2 3 27 27 H 1.09006 * 113.61492 * 25.42374 * 5 3 2 28 28 H 1.09007 * 113.61576 * 254.52852 * 5 3 2 29 29 H 0.97002 * 120.00229 * 72.49782 * 8 6 5 30 30 H 1.07994 * 120.03861 * 359.96496 * 12 11 9 31 31 H 1.09003 * 109.46911 * 225.25412 * 14 13 12 32 32 H 0.96696 * 114.00254 * 179.97438 * 15 14 13 33 33 H 1.48498 * 109.99852 * 60.00006 * 16 14 13 34 34 H 1.48500 * 110.00186 * 181.32380 * 16 14 13 35 35 H 1.09002 * 109.47401 * 59.99935 * 19 18 17 36 36 H 1.09001 * 109.46874 * 299.99948 * 19 18 17 37 37 H 1.09004 * 109.46970 * 180.02562 * 19 18 17 38 38 H 1.09006 * 109.46770 * 179.97438 * 20 18 17 39 39 H 1.09001 * 109.47456 * 299.99877 * 20 18 17 40 40 H 1.09000 * 109.46814 * 60.00182 * 20 18 17 41 41 H 1.08001 * 119.96119 * 180.28998 * 21 17 13 42 42 H 1.08003 * 120.03098 * 179.97438 * 22 21 17 43 43 H 1.09004 * 113.61535 * 139.98507 * 23 6 5 44 44 H 1.09000 * 113.61335 * 270.88684 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0788 -0.3238 5 6 2.7535 1.6488 1.3017 6 6 3.8227 2.3181 0.4221 7 1 3.6236 3.3694 0.2141 8 7 5.1935 2.0786 0.8802 9 6 5.8951 3.0745 1.4566 10 8 5.3902 4.1717 1.5968 11 6 7.2752 2.8331 1.9184 12 6 8.0040 3.8650 2.5169 13 6 9.2892 3.6349 2.9522 14 6 10.0732 4.7448 3.6036 15 8 10.1390 4.5181 5.0130 16 14 9.2325 6.3746 3.2754 17 6 9.8675 2.3795 2.7867 18 7 11.1681 2.1519 3.2223 19 6 12.0324 1.7414 2.1077 20 6 11.1948 1.1574 4.3031 21 6 9.1441 1.3497 2.1908 22 6 7.8568 1.5719 1.7587 23 6 3.3755 1.3718 -0.7046 24 1 -0.3633 0.5139 0.8900 25 1 -0.3634 0.5137 -0.8899 26 1 -0.3634 -1.0276 0.0005 27 1 3.1167 0.7739 1.8410 28 1 2.2141 2.3477 1.9412 29 1 5.5962 1.2032 0.7687 30 1 7.5576 4.8404 2.6414 31 1 11.0822 4.7671 3.1918 32 1 10.6305 5.1951 5.4978 33 1 7.8559 6.3570 3.8320 34 1 10.0131 7.4807 3.8855 35 1 12.0492 2.5272 1.3524 36 1 11.6455 0.8225 1.6673 37 1 13.0437 1.5695 2.4763 38 1 12.2240 0.9979 4.6248 39 1 10.6027 1.5186 5.1441 40 1 10.7775 0.2173 3.9422 41 1 9.5938 0.3755 2.0681 42 1 7.2964 0.7728 1.2963 43 1 3.3384 1.8470 -1.6849 44 1 3.9088 0.4212 -0.7138 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_13422196.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:22 Heat of formation + Delta-G solvation = -32.480793 kcal Electronic energy + Delta-G solvation = -25417.204889 eV Core-core repulsion = 21723.958263 eV Total energy + Delta-G solvation = -3693.246626 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.162 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -41.78276 -40.91094 -39.78000 -37.84926 -37.42774 -37.16367 -34.48370 -32.80439 -31.26671 -28.50740 -27.86735 -26.91124 -26.80643 -26.48636 -24.65700 -23.12090 -22.75123 -21.36577 -20.88869 -18.82014 -18.50422 -18.30078 -17.72397 -17.24653 -16.72814 -16.47766 -16.29944 -16.05482 -15.97220 -15.76956 -15.49621 -15.12299 -15.04866 -14.83670 -14.49550 -14.05816 -13.81144 -13.71784 -13.50353 -13.42019 -13.35037 -13.01331 -12.78465 -12.70146 -12.61202 -12.22750 -12.15474 -12.11487 -11.93298 -11.86315 -11.13662 -10.49406 -10.41128 -10.22493 -10.11964 -9.76974 -9.51035 -4.99542 -0.39300 0.14029 1.25931 1.51039 1.61229 1.89230 1.96924 2.58453 2.80590 2.91687 3.35834 3.43195 3.52506 3.62726 3.74411 3.77495 3.80259 3.87945 4.04891 4.13928 4.24445 4.29600 4.39471 4.46292 4.47788 4.51564 4.53957 4.62569 4.67716 4.69771 4.71253 4.79222 4.84612 4.93307 4.93731 4.97890 5.00055 5.02121 5.05740 5.13873 5.24904 5.42158 5.55557 5.87781 6.24040 6.28272 6.41206 6.64077 7.07096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.395 6.395 3 C 0.062 3.938 4 H 0.104 0.896 5 C -0.169 4.169 6 C 0.121 3.879 7 H 0.108 0.892 8 N -0.698 5.698 9 C 0.560 3.440 10 O -0.579 6.579 11 C -0.151 4.151 12 C -0.067 4.067 13 C -0.075 4.075 14 C -0.050 4.050 15 O -0.546 6.546 16 Si 0.731 3.269 17 C 0.139 3.861 18 N -0.521 5.521 19 C 0.023 3.977 20 C 0.033 3.967 21 C -0.156 4.156 22 C -0.056 4.056 23 C -0.131 4.131 24 H 0.045 0.955 25 H 0.053 0.947 26 H 0.093 0.907 27 H 0.092 0.908 28 H 0.068 0.932 29 H 0.416 0.584 30 H 0.127 0.873 31 H 0.097 0.903 32 H 0.392 0.608 33 H -0.309 1.309 34 H -0.275 1.275 35 H 0.073 0.927 36 H 0.042 0.958 37 H 0.084 0.916 38 H 0.085 0.915 39 H 0.057 0.943 40 H 0.040 0.960 41 H 0.152 0.848 42 H 0.161 0.839 43 H 0.094 0.906 44 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.528 -4.679 -4.239 6.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.314 6.314 3 C 0.003 3.997 4 H 0.121 0.879 5 C -0.208 4.208 6 C 0.016 3.984 7 H 0.126 0.874 8 N -0.350 5.350 9 C 0.349 3.651 10 O -0.460 6.460 11 C -0.154 4.154 12 C -0.086 4.086 13 C -0.076 4.076 14 C -0.160 4.160 15 O -0.356 6.356 16 Si 0.638 3.362 17 C 0.044 3.956 18 N -0.242 5.242 19 C -0.123 4.123 20 C -0.113 4.113 21 C -0.176 4.176 22 C -0.075 4.075 23 C -0.169 4.169 24 H 0.064 0.936 25 H 0.072 0.928 26 H 0.111 0.889 27 H 0.110 0.890 28 H 0.087 0.913 29 H 0.254 0.746 30 H 0.144 0.856 31 H 0.115 0.885 32 H 0.242 0.758 33 H -0.238 1.238 34 H -0.202 1.202 35 H 0.092 0.908 36 H 0.061 0.939 37 H 0.103 0.897 38 H 0.104 0.896 39 H 0.076 0.924 40 H 0.059 0.941 41 H 0.170 0.830 42 H 0.178 0.822 43 H 0.112 0.888 44 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 1.775 -3.474 -3.783 5.434 hybrid contribution -0.090 -0.634 1.093 1.267 sum 1.685 -4.108 -2.691 5.192 Atomic orbital electron populations 1.22957 0.79863 1.03710 1.00764 1.87899 1.21138 1.27727 1.94657 1.23551 0.94360 0.85627 0.96143 0.87861 1.24010 0.97625 1.01104 0.98083 1.22225 0.80105 1.00378 0.95708 0.87397 1.45709 1.14655 1.14274 1.60349 1.18426 0.85790 0.84021 0.76898 1.90782 1.71894 1.25664 1.57617 1.19818 0.94056 0.95918 1.05568 1.21138 0.92960 0.99184 0.95310 1.19238 0.93402 0.94941 1.00047 1.24506 1.04287 1.03856 0.83391 1.86534 1.78609 1.52540 1.17882 0.94495 0.75687 0.74600 0.91445 1.18960 0.90386 0.92256 0.93964 1.59362 1.06334 1.47197 1.11288 1.22576 0.97135 1.00135 0.92410 1.22424 1.03375 0.92259 0.93216 1.21859 0.95162 1.00249 1.00311 1.21436 0.94927 0.95123 0.96009 1.23566 0.94820 1.00208 0.98314 0.93603 0.92843 0.88873 0.88987 0.91348 0.74565 0.85582 0.88523 0.75845 1.23757 1.20152 0.90805 0.93924 0.89698 0.89642 0.92428 0.94127 0.82992 0.82165 0.88763 0.87730 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 10.85 113.37 1.23 1.18 16 2 O -0.40 -0.93 10.71 -148.98 -1.60 -2.52 16 3 C 0.06 -0.06 4.31 31.12 0.13 0.07 16 4 H 0.10 -0.35 7.87 -2.39 -0.02 -0.37 16 5 C -0.17 -0.10 7.71 31.12 0.24 0.14 16 6 C 0.12 0.03 4.24 45.52 0.19 0.22 16 7 H 0.11 0.36 7.46 -2.39 -0.02 0.34 16 8 N -0.70 -0.01 5.30 -443.22 -2.35 -2.36 16 9 C 0.56 3.96 7.76 86.69 0.67 4.63 16 10 O -0.58 -9.06 15.94 -4.01 -0.06 -9.13 16 11 C -0.15 -0.67 5.88 -20.08 -0.12 -0.79 16 12 C -0.07 -0.48 8.20 22.50 0.18 -0.30 16 13 C -0.08 -0.38 5.31 -19.78 -0.10 -0.49 16 14 C -0.05 -0.16 2.32 71.23 0.17 0.01 16 15 O -0.55 -2.69 12.86 -148.98 -1.92 -4.61 16 16 Si 0.73 2.73 30.18 68.60 2.07 4.80 16 17 C 0.14 0.29 4.70 38.47 0.18 0.48 16 18 N -0.52 -0.14 4.20 -745.08 -3.13 -3.27 16 19 C 0.02 -0.10 9.34 127.69 1.19 1.10 16 20 C 0.03 -0.03 9.38 127.69 1.20 1.16 16 21 C -0.16 0.27 8.53 22.36 0.19 0.46 16 22 C -0.06 0.12 9.53 22.50 0.21 0.33 16 23 C -0.13 0.45 7.66 31.12 0.24 0.69 16 24 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 25 H 0.05 -0.21 8.14 -2.39 -0.02 -0.23 16 26 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 27 H 0.09 0.10 8.14 -2.38 -0.02 0.08 16 28 H 0.07 0.15 8.14 -2.38 -0.02 0.13 16 29 H 0.42 -2.60 6.74 -92.71 -0.63 -3.22 16 30 H 0.13 1.29 4.46 -2.91 -0.01 1.28 16 31 H 0.10 0.02 7.77 -2.39 -0.02 0.00 16 32 H 0.39 -1.06 8.74 -74.06 -0.65 -1.71 16 33 H -0.31 -4.06 6.76 99.48 0.67 -3.39 16 34 H -0.28 -1.70 7.11 99.48 0.71 -0.99 16 35 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 36 H 0.04 -0.25 7.10 -2.39 -0.02 -0.27 16 37 H 0.08 -0.48 8.12 -2.38 -0.02 -0.50 16 38 H 0.08 -0.28 8.12 -2.38 -0.02 -0.30 16 39 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 40 H 0.04 -0.13 7.32 -2.39 -0.02 -0.15 16 41 H 0.15 -0.95 6.99 -2.91 -0.02 -0.97 16 42 H 0.16 -1.49 6.39 -2.91 -0.02 -1.51 16 43 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 44 H 0.10 -0.49 8.12 -2.39 -0.02 -0.51 16 Total: 0.00 -20.20 359.10 -1.42 -21.63 By element: Atomic # 1 Polarization: -13.19 SS G_CDS: -0.25 Total: -13.44 kcal Atomic # 6 Polarization: 3.09 SS G_CDS: 5.81 Total: 8.90 kcal Atomic # 7 Polarization: -0.15 SS G_CDS: -5.48 Total: -5.63 kcal Atomic # 8 Polarization: -12.68 SS G_CDS: -3.58 Total: -16.26 kcal Atomic # 14 Polarization: 2.73 SS G_CDS: 2.07 Total: 4.80 kcal Total: -20.20 -1.42 -21.63 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13422196.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.853 kcal (2) G-P(sol) polarization free energy of solvation -20.204 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.057 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.424 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.628 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.481 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds