Wall clock time and date at job start Mon Mar 8 2021 04:10:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42901 * 113.99678 * 2 1 4 4 H 1.09000 * 112.91049 * 18.74630 * 3 2 1 5 5 C 1.53787 * 113.61020 * 149.99776 * 3 2 1 6 6 C 1.53784 * 87.07923 * 139.98045 * 5 3 2 7 7 H 1.09002 * 113.61478 * 89.11632 * 6 5 3 8 8 N 1.46497 * 113.61569 * 220.01663 * 6 5 3 9 9 C 1.34769 * 120.00274 * 204.99925 * 8 6 5 10 10 O 1.21657 * 120.00197 * 359.97438 * 9 8 6 11 11 C 1.47050 * 119.99885 * 179.97438 * 9 8 6 12 12 C 1.36228 * 123.49101 * 179.70460 * 11 9 8 13 13 Cl 1.73605 * 124.60442 * 0.02562 * 12 11 9 14 14 S 1.70440 * 110.79033 * 179.89336 * 12 11 9 15 15 C 1.75492 * 92.46562 * 0.31862 * 14 12 11 16 16 C 1.50704 * 124.68797 * 179.85182 * 15 14 12 17 17 O 1.42905 * 109.46751 * 119.95834 * 16 15 14 18 18 Si 1.86299 * 109.46844 * 359.96374 * 16 15 14 19 19 C 1.32694 * 110.63043 * 359.81912 * 15 14 12 20 20 C 1.53779 * 87.08045 * 334.56667 * 6 5 3 21 21 H 1.08995 * 109.47477 * 300.00200 * 1 2 3 22 22 H 1.09003 * 109.47192 * 60.00213 * 1 2 3 23 23 H 1.09004 * 109.47150 * 180.02562 * 1 2 3 24 24 H 1.09004 * 113.61202 * 254.52798 * 5 3 2 25 25 H 1.08994 * 113.61447 * 25.43229 * 5 3 2 26 26 H 0.97009 * 119.99534 * 24.99936 * 8 6 5 27 27 H 1.08994 * 109.47380 * 239.96118 * 16 15 14 28 28 H 0.96695 * 114.00195 * 299.99835 * 17 16 15 29 29 H 1.48501 * 110.00208 * 180.02562 * 18 16 15 30 30 H 1.48502 * 109.99833 * 301.31636 * 18 16 15 31 31 H 1.08000 * 123.45263 * 180.02562 * 19 15 14 32 32 H 1.09006 * 113.61307 * 270.88660 * 20 6 5 33 33 H 1.08999 * 113.69146 * 139.99146 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3142 2.0798 0.3227 5 6 3.3755 1.3719 0.7046 6 6 3.8227 2.3182 -0.4221 7 1 3.6222 3.3694 -0.2149 8 7 5.1935 2.0787 -0.8802 9 6 5.8950 3.0746 -1.4566 10 8 5.3899 4.1724 -1.5970 11 6 7.2712 2.8343 -1.9159 12 6 8.0417 3.7864 -2.5121 13 17 7.5309 5.4165 -2.8218 14 16 9.5766 3.1610 -2.9095 15 6 9.1799 1.5755 -2.2702 16 6 10.1139 0.3928 -2.2692 17 8 10.3406 -0.0340 -0.9244 18 14 11.7347 0.8811 -3.0473 19 6 7.9441 1.5620 -1.7871 20 6 2.7535 1.6489 -1.3017 21 1 -0.3634 0.5138 0.8899 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3634 -1.0277 0.0005 24 1 3.3383 1.8471 1.6849 25 1 3.9088 0.4214 0.7139 26 1 5.5961 1.2032 -0.7686 27 1 9.6684 -0.4225 -2.8390 28 1 10.7365 0.6427 -0.3584 29 1 12.6646 -0.2767 -3.0530 30 1 11.5086 1.3571 -4.4357 31 1 7.4881 0.6897 -1.3427 32 1 3.1167 0.7739 -1.8409 33 1 2.2134 2.3465 -1.9418 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_13431040.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:29 Heat of formation + Delta-G solvation = -48.971131 kcal Electronic energy + Delta-G solvation = -20068.622630 eV Core-core repulsion = 16636.052151 eV Total energy + Delta-G solvation = -3432.570478 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.037 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -41.41885 -40.10722 -38.85219 -38.00268 -37.27609 -36.92460 -34.16175 -31.64192 -27.94794 -27.00102 -26.78567 -26.40774 -24.06510 -22.20822 -21.20774 -20.60112 -19.39224 -18.39615 -17.81839 -17.61911 -16.79756 -16.61838 -16.35926 -16.17922 -15.85406 -15.71664 -15.35748 -15.02987 -14.61534 -14.47147 -14.32898 -14.05270 -13.50622 -13.43273 -12.93870 -12.76068 -12.59898 -12.40304 -12.23645 -12.15476 -12.09884 -11.87939 -11.84726 -10.96107 -10.59723 -10.49174 -10.18012 -9.89605 -9.65638 -5.12774 -0.64661 -0.20621 0.46733 0.70292 1.03146 1.19055 1.57467 1.90360 2.08371 2.13061 2.93054 3.27973 3.42040 3.52912 3.59782 3.77390 3.81649 3.87129 3.90567 4.28301 4.37608 4.45344 4.51713 4.53765 4.70190 4.70966 4.77251 4.84441 4.93461 4.94240 4.95882 5.02597 5.44814 6.24144 6.42525 6.70584 7.09986 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.396 6.396 3 C 0.062 3.938 4 H 0.104 0.896 5 C -0.133 4.133 6 C 0.125 3.875 7 H 0.108 0.892 8 N -0.698 5.698 9 C 0.572 3.428 10 O -0.559 6.559 11 C -0.168 4.168 12 C -0.139 4.139 13 Cl 0.004 6.996 14 S 0.267 5.733 15 C -0.228 4.228 16 C -0.020 4.020 17 O -0.543 6.543 18 Si 0.713 3.287 19 C -0.069 4.069 20 C -0.167 4.167 21 H 0.053 0.947 22 H 0.046 0.954 23 H 0.093 0.907 24 H 0.092 0.908 25 H 0.102 0.898 26 H 0.414 0.586 27 H 0.133 0.867 28 H 0.399 0.601 29 H -0.266 1.266 30 H -0.260 1.260 31 H 0.178 0.822 32 H 0.090 0.910 33 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.280 -2.681 2.282 4.195 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.315 6.315 3 C 0.003 3.997 4 H 0.121 0.879 5 C -0.171 4.171 6 C 0.019 3.981 7 H 0.126 0.874 8 N -0.349 5.349 9 C 0.358 3.642 10 O -0.439 6.439 11 C -0.188 4.188 12 C -0.285 4.285 13 Cl 0.033 6.967 14 S 0.533 5.467 15 C -0.346 4.346 16 C -0.134 4.134 17 O -0.351 6.351 18 Si 0.616 3.384 19 C -0.098 4.098 20 C -0.206 4.206 21 H 0.071 0.929 22 H 0.065 0.935 23 H 0.111 0.889 24 H 0.111 0.889 25 H 0.121 0.879 26 H 0.252 0.748 27 H 0.150 0.850 28 H 0.249 0.751 29 H -0.191 1.191 30 H -0.186 1.186 31 H 0.195 0.805 32 H 0.109 0.891 33 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 3.583 -1.999 0.609 4.148 hybrid contribution -2.107 -0.564 0.411 2.219 sum 1.476 -2.562 1.020 3.128 Atomic orbital electron populations 1.22957 0.79856 1.03702 1.00773 1.87904 1.21153 1.27748 1.94664 1.23554 0.94292 0.85604 0.96232 0.87866 1.23568 0.94931 1.00214 0.98354 1.22180 0.80083 1.00260 0.95546 0.87397 1.45652 1.14606 1.14181 1.60506 1.17725 0.84810 0.84267 0.77405 1.90850 1.71297 1.24919 1.56827 1.20327 0.96203 0.94516 1.07741 1.25802 1.02940 0.92875 1.06915 1.98426 1.90355 1.14440 1.93511 1.83221 1.06416 1.00987 1.56102 1.24961 1.00654 0.99810 1.09145 1.24454 1.04234 0.94457 0.90218 1.86516 1.85151 1.43339 1.20091 0.94292 0.76601 0.86004 0.81532 1.21114 0.93003 0.96001 0.99636 1.23990 0.97571 1.01077 0.97996 0.92881 0.93532 0.88895 0.88933 0.87927 0.74789 0.84985 0.75085 1.19082 1.18566 0.80482 0.89101 0.91229 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.40 -1.08 10.71 -148.98 -1.60 -2.68 16 3 C 0.06 -0.04 4.31 31.12 0.13 0.09 16 4 H 0.10 -0.32 7.87 -2.39 -0.02 -0.34 16 5 C -0.13 0.37 7.66 31.12 0.24 0.61 16 6 C 0.12 0.04 4.24 45.52 0.19 0.23 16 7 H 0.11 0.36 7.47 -2.39 -0.02 0.34 16 8 N -0.70 -0.15 5.33 -443.66 -2.37 -2.51 16 9 C 0.57 3.67 7.79 86.56 0.67 4.34 16 10 O -0.56 -7.78 14.51 -4.21 -0.06 -7.84 16 11 C -0.17 -0.52 5.98 -19.84 -0.12 -0.64 16 12 C -0.14 -0.57 6.87 67.35 0.46 -0.10 16 13 Cl 0.00 0.03 27.20 -2.72 -0.07 -0.04 16 14 S 0.27 -0.62 20.17 -56.49 -1.14 -1.76 16 15 C -0.23 0.97 5.68 24.52 0.14 1.11 16 16 C -0.02 0.12 2.95 71.24 0.21 0.33 16 17 O -0.54 3.17 12.85 -148.98 -1.91 1.25 16 18 Si 0.71 -4.05 30.91 68.60 2.12 -1.93 16 19 C -0.07 0.21 9.71 22.70 0.22 0.43 16 20 C -0.17 -0.10 7.71 31.12 0.24 0.14 16 21 H 0.05 -0.20 8.14 -2.39 -0.02 -0.22 16 22 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 23 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 24 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 25 H 0.10 -0.37 8.12 -2.39 -0.02 -0.39 16 26 H 0.41 -2.17 7.27 -92.70 -0.67 -2.85 16 27 H 0.13 -0.87 7.96 -2.39 -0.02 -0.89 16 28 H 0.40 -5.26 8.70 -74.06 -0.64 -5.91 16 29 H -0.27 -0.20 7.11 99.48 0.71 0.51 16 30 H -0.26 0.32 7.11 99.48 0.71 1.02 16 31 H 0.18 -1.36 7.10 -2.91 -0.02 -1.38 16 32 H 0.09 0.12 8.14 -2.38 -0.02 0.10 16 33 H 0.07 0.13 8.14 -2.39 -0.02 0.11 16 Total: 0.00 -17.02 312.98 -1.52 -18.55 By element: Atomic # 1 Polarization: -10.66 SS G_CDS: -0.12 Total: -10.77 kcal Atomic # 6 Polarization: 4.11 SS G_CDS: 3.62 Total: 7.74 kcal Atomic # 7 Polarization: -0.15 SS G_CDS: -2.37 Total: -2.51 kcal Atomic # 8 Polarization: -5.70 SS G_CDS: -3.57 Total: -9.27 kcal Atomic # 14 Polarization: -4.05 SS G_CDS: 2.12 Total: -1.93 kcal Atomic # 16 Polarization: -0.62 SS G_CDS: -1.14 Total: -1.76 kcal Atomic # 17 Polarization: 0.03 SS G_CDS: -0.07 Total: -0.04 kcal Total: -17.02 -1.52 -18.55 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13431040.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.424 kcal (2) G-P(sol) polarization free energy of solvation -17.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.447 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.524 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.547 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.971 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds