Wall clock time and date at job start Mon Mar 8 2021 04:10:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42899 * 114.00118 * 2 1 4 4 H 1.09002 * 112.84544 * 341.19641 * 3 2 1 5 5 C 1.53955 * 113.66797 * 112.43948 * 3 2 1 6 6 C 1.53783 * 87.01936 * 139.93758 * 5 3 2 7 7 H 1.08994 * 113.61600 * 89.23233 * 6 5 3 8 8 N 1.46495 * 113.61202 * 220.04890 * 6 5 3 9 9 C 1.34776 * 120.00243 * 254.13422 * 8 6 5 10 10 O 1.21613 * 119.99634 * 0.02562 * 9 8 6 11 11 C 1.47380 * 119.99863 * 179.97438 * 9 8 6 12 12 C 1.36411 * 127.19764 * 359.97438 * 11 9 8 13 13 O 1.33648 * 108.40050 * 180.02562 * 12 11 9 14 14 C 1.34214 * 110.90806 * 359.97438 * 13 12 11 15 15 C 1.50699 * 125.43765 * 179.97438 * 14 13 12 16 16 O 1.42903 * 109.47152 * 120.03099 * 15 14 13 17 17 Si 1.86293 * 109.47431 * 0.02991 * 15 14 13 18 18 C 1.34183 * 109.12463 * 0.26932 * 14 13 12 19 19 C 1.53775 * 113.61892 * 210.00392 * 3 2 1 20 20 H 1.09002 * 109.46862 * 179.97438 * 1 2 3 21 21 H 1.08994 * 109.47333 * 299.99983 * 1 2 3 22 22 H 1.09001 * 109.47343 * 60.00365 * 1 2 3 23 23 H 1.09002 * 113.60884 * 25.41296 * 5 3 2 24 24 H 1.09004 * 113.66732 * 254.46748 * 5 3 2 25 25 H 0.97008 * 120.00010 * 74.13668 * 8 6 5 26 26 H 1.08003 * 125.80081 * 359.96081 * 12 11 9 27 27 H 1.09008 * 109.47393 * 240.02494 * 15 14 13 28 28 H 0.96700 * 114.00311 * 180.02562 * 16 15 14 29 29 H 1.48506 * 109.99973 * 59.99460 * 17 15 14 30 30 H 1.48493 * 110.00375 * 181.31561 * 17 15 14 31 31 H 1.07997 * 127.02335 * 179.73313 * 18 14 13 32 32 H 1.09001 * 113.61878 * 105.46942 * 19 3 2 33 33 H 1.09004 * 113.61452 * 334.56572 * 19 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0788 -0.3238 5 6 2.7533 1.6511 1.3033 6 6 3.8227 2.3182 0.4222 7 1 3.6235 3.3695 0.2143 8 7 5.1934 2.0787 0.8803 9 6 5.8841 3.0657 1.4845 10 8 5.3693 4.1550 1.6499 11 6 7.2629 2.8245 1.9459 12 6 7.9781 1.6679 1.8384 13 8 9.1839 1.8656 2.3799 14 6 9.2998 3.1186 2.8466 15 6 10.5203 3.6907 3.5203 16 8 10.9975 4.8099 2.7709 17 14 11.8499 2.3886 3.6064 18 6 8.1530 3.7787 2.6233 19 6 3.3755 1.3720 -0.7045 20 1 -0.3633 -1.0277 -0.0005 21 1 -0.3634 0.5138 0.8899 22 1 -0.3634 0.5138 -0.8900 23 1 3.1161 0.7769 1.8440 24 1 2.2145 2.3513 1.9417 25 1 5.6039 1.2097 0.7487 26 1 7.6289 0.7483 1.3924 27 1 10.2613 4.0127 4.5290 28 1 11.7837 5.2289 3.1471 29 1 12.2120 1.9412 2.2374 30 1 13.0476 2.9305 4.2971 31 1 7.9302 4.8023 2.8858 32 1 3.3383 1.8472 -1.6848 33 1 3.9088 0.4214 -0.7139 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_13456056.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:32 Heat of formation + Delta-G solvation = -58.070217 kcal Electronic energy + Delta-G solvation = -18268.757067 eV Core-core repulsion = 15071.521137 eV Total energy + Delta-G solvation = -3197.235931 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 254.103 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -43.67556 -41.10785 -39.58651 -38.10675 -37.23384 -34.45399 -33.60340 -31.82185 -27.93499 -26.86661 -26.75262 -25.76706 -23.76572 -22.15515 -21.28300 -20.62891 -18.98882 -18.76013 -18.17493 -17.32012 -17.12248 -16.87105 -16.36704 -16.17264 -15.82866 -15.82559 -15.51591 -15.07479 -14.52777 -14.09542 -14.03041 -13.68806 -13.55515 -13.47218 -12.83245 -12.79532 -12.21950 -12.18986 -12.09199 -11.90035 -10.99170 -10.85828 -10.68276 -10.51555 -10.07275 -9.74071 -5.02180 0.26195 0.89756 1.12966 1.39853 1.69498 1.91955 2.02862 2.37035 2.86669 3.21186 3.37486 3.47271 3.49270 3.60324 3.76574 3.81126 3.90833 4.16451 4.24525 4.38511 4.42799 4.46634 4.63391 4.65496 4.65804 4.73826 4.81618 4.87294 4.93503 5.03299 5.26395 5.46831 5.89152 6.18881 6.25989 6.46260 7.22642 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.168 4.168 6 C 0.126 3.874 7 H 0.120 0.880 8 N -0.716 5.716 9 C 0.590 3.410 10 O -0.531 6.531 11 C -0.238 4.238 12 C 0.034 3.966 13 O -0.165 6.165 14 C -0.011 4.011 15 C -0.038 4.038 16 O -0.533 6.533 17 Si 0.702 3.298 18 C -0.121 4.121 19 C -0.144 4.144 20 H 0.087 0.913 21 H 0.043 0.957 22 H 0.043 0.957 23 H 0.095 0.905 24 H 0.077 0.923 25 H 0.400 0.600 26 H 0.216 0.784 27 H 0.098 0.902 28 H 0.389 0.611 29 H -0.252 1.252 30 H -0.253 1.253 31 H 0.161 0.839 32 H 0.083 0.917 33 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.059 -3.905 1.318 4.122 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.207 4.207 6 C 0.021 3.979 7 H 0.138 0.862 8 N -0.367 5.367 9 C 0.378 3.622 10 O -0.408 6.408 11 C -0.243 4.243 12 C -0.036 4.036 13 O -0.061 6.061 14 C -0.059 4.059 15 C -0.147 4.147 16 O -0.342 6.342 17 Si 0.601 3.399 18 C -0.140 4.140 19 C -0.182 4.182 20 H 0.105 0.895 21 H 0.062 0.938 22 H 0.062 0.938 23 H 0.113 0.887 24 H 0.095 0.905 25 H 0.235 0.765 26 H 0.232 0.768 27 H 0.115 0.885 28 H 0.238 0.762 29 H -0.176 1.176 30 H -0.177 1.177 31 H 0.179 0.821 32 H 0.101 0.899 33 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 0.347 -3.840 0.861 3.951 hybrid contribution 0.095 1.008 -0.266 1.047 sum 0.441 -2.832 0.595 2.928 Atomic orbital electron populations 1.22831 0.80721 1.03068 1.00169 1.87933 1.20034 1.26860 1.94558 1.23486 0.93741 0.85802 0.96467 0.88912 1.24055 0.97434 1.01449 0.97789 1.22215 0.80198 1.00607 0.94885 0.86240 1.45732 1.15030 1.14933 1.60992 1.17288 0.83918 0.84017 0.76957 1.90811 1.70117 1.24129 1.55770 1.21497 0.96569 0.95674 1.10538 1.24462 0.82743 0.99479 0.96962 1.83653 1.33181 1.30465 1.58777 1.21051 0.97047 0.83081 1.04763 1.23812 0.99485 0.96310 0.95095 1.86566 1.49270 1.44556 1.53767 0.94490 0.77394 0.83584 0.84461 1.22482 0.91101 1.00349 1.00104 1.23623 0.95727 1.00347 0.98481 0.89457 0.93821 0.93803 0.88671 0.90476 0.76535 0.76809 0.88476 0.76168 1.17571 1.17720 0.82092 0.89865 0.88442 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.45 10.72 -35.23 -0.38 -0.82 16 3 C 0.06 -0.03 4.31 -25.83 -0.11 -0.14 16 4 H 0.09 -0.15 7.87 -51.93 -0.41 -0.56 16 5 C -0.17 0.04 7.73 -25.83 -0.20 -0.16 16 6 C 0.13 -0.02 4.21 -67.12 -0.28 -0.30 16 7 H 0.12 0.14 7.50 -51.93 -0.39 -0.25 16 8 N -0.72 0.20 5.35 -54.11 -0.29 -0.09 16 9 C 0.59 1.87 7.81 -12.54 -0.10 1.77 16 10 O -0.53 -3.88 16.60 5.27 0.09 -3.79 16 11 C -0.24 -0.47 6.31 -103.28 -0.65 -1.12 16 12 C 0.03 -0.03 11.61 30.07 0.35 0.32 16 13 O -0.16 -0.10 8.89 7.67 0.07 -0.04 16 14 C -0.01 -0.02 6.23 -35.74 -0.22 -0.24 16 15 C -0.04 0.02 2.96 36.01 0.11 0.12 16 16 O -0.53 -0.37 12.84 -35.23 -0.45 -0.82 16 17 Si 0.70 -0.91 32.08 -169.99 -5.45 -6.37 16 18 C -0.12 -0.36 10.88 -37.45 -0.41 -0.77 16 19 C -0.14 0.20 7.66 -25.92 -0.20 0.00 16 20 H 0.09 -0.15 8.14 -51.93 -0.42 -0.58 16 21 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 22 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 23 H 0.09 0.00 8.14 -51.93 -0.42 -0.42 16 24 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 25 H 0.40 -1.35 7.68 -40.82 -0.31 -1.67 16 26 H 0.22 -1.25 7.47 -52.48 -0.39 -1.64 16 27 H 0.10 -0.27 7.96 -51.92 -0.41 -0.68 16 28 H 0.39 -1.49 8.74 45.56 0.40 -1.09 16 29 H -0.25 -0.62 7.11 56.52 0.40 -0.22 16 30 H -0.25 -0.01 7.11 56.52 0.40 0.40 16 31 H 0.16 0.52 8.06 -52.49 -0.42 0.09 16 32 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.10 -0.18 8.11 -51.93 -0.42 -0.60 16 LS Contribution 293.52 15.07 4.42 4.42 Total: 0.00 -9.45 293.52 -6.71 -16.16 By element: Atomic # 1 Polarization: -5.10 SS G_CDS: -4.10 Total: -9.19 kcal Atomic # 6 Polarization: 1.16 SS G_CDS: -0.62 Total: 0.54 kcal Atomic # 7 Polarization: 0.20 SS G_CDS: -0.29 Total: -0.09 kcal Atomic # 8 Polarization: -4.80 SS G_CDS: -0.67 Total: -5.48 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.45 Total: -6.37 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -9.45 -6.71 -16.16 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13456056.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.906 kcal (2) G-P(sol) polarization free energy of solvation -9.452 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.358 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.712 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.164 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds