Wall clock time and date at job start Mon Mar 8 2021 04:10:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42899 * 114.00118 * 2 1 4 4 H 1.09002 * 112.84544 * 341.19641 * 3 2 1 5 5 C 1.53955 * 113.66797 * 112.43948 * 3 2 1 6 6 C 1.53783 * 87.01936 * 139.93758 * 5 3 2 7 7 H 1.08994 * 113.61600 * 89.23233 * 6 5 3 8 8 N 1.46495 * 113.61202 * 220.04890 * 6 5 3 9 9 C 1.34776 * 120.00243 * 254.13422 * 8 6 5 10 10 O 1.21613 * 119.99634 * 0.02562 * 9 8 6 11 11 C 1.47380 * 119.99863 * 179.97438 * 9 8 6 12 12 C 1.36411 * 127.19764 * 359.97438 * 11 9 8 13 13 O 1.33648 * 108.40050 * 180.02562 * 12 11 9 14 14 C 1.34214 * 110.90806 * 359.97438 * 13 12 11 15 15 C 1.50699 * 125.43765 * 179.97438 * 14 13 12 16 16 O 1.42903 * 109.47152 * 120.03099 * 15 14 13 17 17 Si 1.86293 * 109.47431 * 0.02991 * 15 14 13 18 18 C 1.34183 * 109.12463 * 0.26932 * 14 13 12 19 19 C 1.53775 * 113.61892 * 210.00392 * 3 2 1 20 20 H 1.09002 * 109.46862 * 179.97438 * 1 2 3 21 21 H 1.08994 * 109.47333 * 299.99983 * 1 2 3 22 22 H 1.09001 * 109.47343 * 60.00365 * 1 2 3 23 23 H 1.09002 * 113.60884 * 25.41296 * 5 3 2 24 24 H 1.09004 * 113.66732 * 254.46748 * 5 3 2 25 25 H 0.97008 * 120.00010 * 74.13668 * 8 6 5 26 26 H 1.08003 * 125.80081 * 359.96081 * 12 11 9 27 27 H 1.09008 * 109.47393 * 240.02494 * 15 14 13 28 28 H 0.96700 * 114.00311 * 180.02562 * 16 15 14 29 29 H 1.48506 * 109.99973 * 59.99460 * 17 15 14 30 30 H 1.48493 * 110.00375 * 181.31561 * 17 15 14 31 31 H 1.07997 * 127.02335 * 179.73313 * 18 14 13 32 32 H 1.09001 * 113.61878 * 105.46942 * 19 3 2 33 33 H 1.09004 * 113.61452 * 334.56572 * 19 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0788 -0.3238 5 6 2.7533 1.6511 1.3033 6 6 3.8227 2.3182 0.4222 7 1 3.6235 3.3695 0.2143 8 7 5.1934 2.0787 0.8803 9 6 5.8841 3.0657 1.4845 10 8 5.3693 4.1550 1.6499 11 6 7.2629 2.8245 1.9459 12 6 7.9781 1.6679 1.8384 13 8 9.1839 1.8656 2.3799 14 6 9.2998 3.1186 2.8466 15 6 10.5203 3.6907 3.5203 16 8 10.9975 4.8099 2.7709 17 14 11.8499 2.3886 3.6064 18 6 8.1530 3.7787 2.6233 19 6 3.3755 1.3720 -0.7045 20 1 -0.3633 -1.0277 -0.0005 21 1 -0.3634 0.5138 0.8899 22 1 -0.3634 0.5138 -0.8900 23 1 3.1161 0.7769 1.8440 24 1 2.2145 2.3513 1.9417 25 1 5.6039 1.2097 0.7487 26 1 7.6289 0.7483 1.3924 27 1 10.2613 4.0127 4.5290 28 1 11.7837 5.2289 3.1471 29 1 12.2120 1.9412 2.2374 30 1 13.0476 2.9305 4.2971 31 1 7.9302 4.8023 2.8858 32 1 3.3383 1.8472 -1.6848 33 1 3.9088 0.4214 -0.7139 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_13456056.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:32 Heat of formation + Delta-G solvation = -61.544851 kcal Electronic energy + Delta-G solvation = -18268.907739 eV Core-core repulsion = 15071.521137 eV Total energy + Delta-G solvation = -3197.386602 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 254.103 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -43.72738 -41.17716 -39.70816 -38.08950 -37.27019 -34.60718 -33.66975 -31.84526 -27.87126 -26.85181 -26.71894 -25.79808 -23.80082 -22.25820 -21.33396 -20.65542 -18.97958 -18.74645 -18.18752 -17.40333 -17.18792 -16.86254 -16.41468 -16.16392 -15.82511 -15.80603 -15.65151 -15.11335 -14.59291 -14.21287 -14.05651 -13.72144 -13.51162 -13.45344 -12.83581 -12.76541 -12.21029 -12.15690 -12.13822 -11.86415 -11.22766 -10.98907 -10.67146 -10.48361 -10.16668 -9.76648 -4.91909 0.23941 0.78274 1.18697 1.45409 1.73622 1.96518 1.98404 2.20738 2.92604 3.33145 3.42190 3.48949 3.53240 3.57652 3.79498 3.87103 3.95108 4.24147 4.31264 4.42007 4.51281 4.52737 4.55189 4.72040 4.72252 4.85618 4.88081 4.94194 4.95357 5.02325 5.11848 5.43589 5.83788 6.24835 6.44575 6.50464 7.10839 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.394 6.394 3 C 0.061 3.939 4 H 0.101 0.899 5 C -0.166 4.166 6 C 0.121 3.879 7 H 0.102 0.898 8 N -0.697 5.697 9 C 0.589 3.411 10 O -0.586 6.586 11 C -0.271 4.271 12 C 0.067 3.933 13 O -0.166 6.166 14 C -0.016 4.016 15 C -0.051 4.051 16 O -0.558 6.558 17 Si 0.787 3.213 18 C -0.151 4.151 19 C -0.131 4.131 20 H 0.093 0.907 21 H 0.046 0.954 22 H 0.051 0.949 23 H 0.096 0.904 24 H 0.068 0.932 25 H 0.417 0.583 26 H 0.266 0.734 27 H 0.121 0.879 28 H 0.406 0.594 29 H -0.304 1.304 30 H -0.268 1.268 31 H 0.145 0.855 32 H 0.091 0.909 33 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.363 -5.565 1.207 5.706 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.313 6.313 3 C 0.003 3.997 4 H 0.119 0.881 5 C -0.205 4.205 6 C 0.016 3.984 7 H 0.120 0.880 8 N -0.349 5.349 9 C 0.378 3.622 10 O -0.467 6.467 11 C -0.275 4.275 12 C -0.003 4.003 13 O -0.062 6.062 14 C -0.064 4.064 15 C -0.158 4.158 16 O -0.370 6.370 17 Si 0.690 3.310 18 C -0.171 4.171 19 C -0.169 4.169 20 H 0.112 0.888 21 H 0.065 0.935 22 H 0.070 0.930 23 H 0.114 0.886 24 H 0.087 0.913 25 H 0.255 0.745 26 H 0.281 0.719 27 H 0.139 0.861 28 H 0.258 0.742 29 H -0.232 1.232 30 H -0.193 1.193 31 H 0.163 0.837 32 H 0.109 0.891 33 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 0.648 -5.528 0.763 5.618 hybrid contribution -0.003 1.507 -0.269 1.531 sum 0.645 -4.020 0.494 4.101 Atomic orbital electron populations 1.22958 0.79868 1.03734 1.00739 1.87896 1.21120 1.27640 1.94654 1.23572 0.94298 0.85614 0.96246 0.88073 1.24025 0.97402 1.01152 0.97947 1.22186 0.80202 1.00130 0.95857 0.87983 1.45590 1.14770 1.15013 1.59525 1.17520 0.84372 0.83735 0.76574 1.90776 1.71330 1.26345 1.58267 1.21477 0.96473 0.96956 1.12606 1.25341 0.81195 0.99822 0.93969 1.83691 1.33819 1.29976 1.58676 1.21357 0.97250 0.83268 1.04503 1.24182 0.99305 0.96588 0.95763 1.86518 1.50512 1.45206 1.54763 0.93540 0.75350 0.81444 0.80677 1.22539 0.92476 1.00361 1.01730 1.23564 0.94939 1.00267 0.98138 0.88812 0.93524 0.92988 0.88601 0.91349 0.74468 0.71884 0.86116 0.74177 1.23182 1.19348 0.83717 0.89070 0.87408 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 10.85 113.37 1.23 1.18 16 2 O -0.39 -0.73 10.72 -148.98 -1.60 -2.32 16 3 C 0.06 -0.08 4.31 31.18 0.13 0.06 16 4 H 0.10 -0.33 7.87 -2.39 -0.02 -0.35 16 5 C -0.17 0.01 7.73 31.18 0.24 0.25 16 6 C 0.12 0.02 4.21 45.52 0.19 0.21 16 7 H 0.10 0.42 7.50 -2.39 -0.02 0.40 16 8 N -0.70 0.45 5.35 -443.35 -2.37 -1.92 16 9 C 0.59 4.45 7.81 86.65 0.68 5.13 16 10 O -0.59 -10.18 16.60 -4.07 -0.07 -10.25 16 11 C -0.27 -1.24 6.31 -18.99 -0.12 -1.36 16 12 C 0.07 -0.23 11.61 67.39 0.78 0.55 16 13 O -0.17 -0.07 8.89 4.52 0.04 -0.03 16 14 C -0.02 -0.06 6.23 24.76 0.15 0.10 16 15 C -0.05 0.05 2.96 71.24 0.21 0.26 16 16 O -0.56 -1.10 12.84 -148.98 -1.91 -3.02 16 17 Si 0.79 -2.38 32.08 68.60 2.20 -0.18 16 18 C -0.15 -1.16 10.88 23.65 0.26 -0.90 16 19 C -0.13 0.47 7.66 31.12 0.24 0.71 16 20 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 21 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 22 H 0.05 -0.21 8.14 -2.39 -0.02 -0.23 16 23 H 0.10 -0.02 8.14 -2.39 -0.02 -0.04 16 24 H 0.07 0.11 8.14 -2.38 -0.02 0.09 16 25 H 0.42 -3.49 7.68 -92.70 -0.71 -4.20 16 26 H 0.27 -4.02 7.47 -2.91 -0.02 -4.05 16 27 H 0.12 -0.73 7.96 -2.38 -0.02 -0.75 16 28 H 0.41 -3.00 8.74 -74.06 -0.65 -3.65 16 29 H -0.30 -1.77 7.11 99.48 0.71 -1.06 16 30 H -0.27 0.18 7.11 99.48 0.71 0.89 16 31 H 0.15 1.43 8.06 -2.91 -0.02 1.40 16 32 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 33 H 0.11 -0.59 8.11 -2.38 -0.02 -0.61 16 Total: 0.00 -24.80 293.52 0.11 -24.70 By element: Atomic # 1 Polarization: -12.97 SS G_CDS: -0.18 Total: -13.16 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: 4.00 Total: 6.18 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -2.37 Total: -1.92 kcal Atomic # 8 Polarization: -12.08 SS G_CDS: -3.54 Total: -15.62 kcal Atomic # 14 Polarization: -2.38 SS G_CDS: 2.20 Total: -0.18 kcal Total: -24.80 0.11 -24.70 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13456056.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.847 kcal (2) G-P(sol) polarization free energy of solvation -24.804 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.651 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.106 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.698 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.545 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds